RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 SMIM9A6NGZ8 99 aa13.48□□□□□ -0.25
CCDC171-206ENST00000474193 RBMY1A1P0DJD3 496 aaKnown RBP13.48□□□□□ -0.25
CCDC171-206ENST00000474193 RBMY1CP0DJD4 496 aa13.48□□□□□ -0.25
CCDC171-206ENST00000474193 DEFB1P60022 68 aa13.48□□□□□ -0.25
CCDC171-206ENST00000474193 RBMY1FQ15415 496 aaKnown RBP13.48□□□□□ -0.25
CCDC171-206ENST00000474193 GDF5OSQ5U4N7 250 aa13.48□□□□□ -0.25
CCDC171-206ENST00000474193 GOLT1BQ9Y3E0 138 aa13.48□□□□□ -0.25
CCDC171-206ENST00000474193 IGHV3OR16-12A0A075B7B8 117 aa13.47□□□□□ -0.25
CCDC171-206ENST00000474193 A0A1B0GV50 99 aa13.47□□□□□ -0.25
CCDC171-206ENST00000474193 TMEM189A5PLL7 270 aa13.47□□□□□ -0.25
CCDC171-206ENST00000474193 HBE1P02100 147 aa13.47□□□□□ -0.25
CCDC171-206ENST00000474193 PPT1P50897 306 aa13.47□□□□□ -0.25
CCDC171-206ENST00000474193 FXYD7P58549 80 aa13.47□□□□□ -0.25
CCDC171-206ENST00000474193 SUN5Q8TC36 379 aa13.47□□□□□ -0.25
CCDC171-206ENST00000474193 NEU1Q99519 415 aa13.47□□□□□ -0.25
CCDC171-206ENST00000474193 TMPRSS5Q9H3S3 457 aa13.47□□□□□ -0.25
CCDC171-206ENST00000474193 SACSQ9NZJ4 4579 aa13.46□□□□□ -0.25
CCDC171-206ENST00000474193 A0A1W2PRE2 83 aa13.46□□□□□ -0.25
CCDC171-206ENST00000474193 M0R3E3 92 aa13.46□□□□□ -0.25
CCDC171-206ENST00000474193 ZNF705DP0CH99 300 aaPredicted RBP13.46□□□□□ -0.25
CCDC171-206ENST00000474193 ZNF705BP0CI00 300 aaPredicted RBP13.46□□□□□ -0.25
CCDC171-206ENST00000474193 CNN1P51911 297 aaKnown RBP13.46□□□□□ -0.25
CCDC171-206ENST00000474193 NKX6-2Q9C056 277 aaPredicted RBP13.46□□□□□ -0.25
CCDC171-206ENST00000474193 TRAV10A0A0B4J240 114 aa13.45□□□□□ -0.26
CCDC171-206ENST00000474193 AMBPP02760 352 aa13.45□□□□□ -0.26
CCDC171-206ENST00000474193 SLC25A5P05141 298 aaKnown RBP13.45□□□□□ -0.26
CCDC171-206ENST00000474193 UBE2G2P60604 165 aa13.45□□□□□ -0.26
CCDC171-206ENST00000474193 BLOC1S1P78537 153 aa13.45□□□□□ -0.26
CCDC171-206ENST00000474193 TMEM208Q9BTX3 173 aa13.45□□□□□ -0.26
CCDC171-206ENST00000474193 IGLL5B9A064 214 aa13.44□□□□□ -0.26
CCDC171-206ENST00000474193 PRAC2D3DTV9 90 aa13.44□□□□□ -0.26
CCDC171-206ENST00000474193 SUMO1P63165 101 aaKnown RBP13.44□□□□□ -0.26
CCDC171-206ENST00000474193 SLC35B3Q9H1N7 401 aa13.44□□□□□ -0.26
CCDC171-206ENST00000474193 RPH3ALQ9UNE2 315 aa13.44□□□□□ -0.26
CCDC171-206ENST00000474193 TRAV1-1A0A0B4J248 108 aa13.43□□□□□ -0.26
CCDC171-206ENST00000474193 K7EQM0 130 aa13.43□□□□□ -0.26
CCDC171-206ENST00000474193 IFNA7P01567 189 aa13.43□□□□□ -0.26
CCDC171-206ENST00000474193 SPART-AS1P0CW21 52 aa13.43□□□□□ -0.26
CCDC171-206ENST00000474193 PRB4P10163 310 aaPredicted RBP13.43□□□□□ -0.26
CCDC171-206ENST00000474193 TMEM78Q5T7P6 136 aa13.43□□□□□ -0.26
CCDC171-206ENST00000474193 CST9LP1Q5W188 147 aa13.43□□□□□ -0.26
CCDC171-206ENST00000474193 LGALS9CQ6DKI2 356 aa13.43□□□□□ -0.26
CCDC171-206ENST00000474193 ZNF705AQ6ZN79 300 aaPredicted RBP13.43□□□□□ -0.26
CCDC171-206ENST00000474193 ARL6IP6Q8N6S5 226 aa13.43□□□□□ -0.26
CCDC171-206ENST00000474193 C5orf17Q8NAS9 161 aa13.43□□□□□ -0.26
CCDC171-206ENST00000474193 LYSTQ99698 3801 aa13.43□□□□□ -0.26
CCDC171-206ENST00000474193 TEX48A0A1B0GUV7 120 aa13.42□□□□□ -0.26
CCDC171-206ENST00000474193 LINC00477Q96M19 166 aa13.42□□□□□ -0.26
CCDC171-206ENST00000474193 ARL2-SNX15V9GYD0 113 aa13.42□□□□□ -0.26
CCDC171-206ENST00000474193 SERTM2A0A1B0GWG4 89 aa13.41□□□□□ -0.26
CCDC171-206ENST00000474193 RBAKDNA6NC62 111 aa13.41□□□□□ -0.26
CCDC171-206ENST00000474193 FAM74A7A6NL05 159 aa13.41□□□□□ -0.26
CCDC171-206ENST00000474193 DIRC3C9JPN6 131 aa13.41□□□□□ -0.26
CCDC171-206ENST00000474193 IFNA1P01562 189 aa13.41□□□□□ -0.26
CCDC171-206ENST00000474193 TSPOP30536 169 aa13.41□□□□□ -0.26
CCDC171-206ENST00000474193 EMP1P54849 157 aa13.41□□□□□ -0.26
CCDC171-206ENST00000474193 RRN3P1Q2M238 152 aa13.41□□□□□ -0.26
CCDC171-206ENST00000474193 TEX261Q6UWH6 196 aa13.41□□□□□ -0.26
CCDC171-206ENST00000474193 MANBALQ9NQG1 85 aa13.41□□□□□ -0.26
CCDC171-206ENST00000474193 YTHDF2Q9Y5A9 579 aaKnown RBP13.41□□□□□ -0.26
CCDC171-206ENST00000474193 IGKV2-40A0A087WW87 121 aaPredicted RBP13.4□□□□□ -0.26
CCDC171-206ENST00000474193 NPIPB6E9PJ23 425 aa13.4□□□□□ -0.26
CCDC171-206ENST00000474193 F6UZH7 168 aa13.4□□□□□ -0.26
CCDC171-206ENST00000474193 PAGE4O60829 102 aa13.4□□□□□ -0.26
CCDC171-206ENST00000474193 IGKV2D-40P01614 121 aaPredicted RBP13.4□□□□□ -0.26
CCDC171-206ENST00000474193 Q6ZTC4 211 aa13.4□□□□□ -0.26
CCDC171-206ENST00000474193 IGF2BP2-AS1Q96M15 143 aa13.4□□□□□ -0.26
CCDC171-206ENST00000474193 GNG13Q9P2W3 67 aa13.4□□□□□ -0.26
CCDC171-206ENST00000474193 EPDR1Q9UM22 224 aa13.4□□□□□ -0.26
CCDC171-206ENST00000474193 RYR2Q92736 4967 aa13.39□□□□□ -0.27
CCDC171-206ENST00000474193 DEFB131BA0A096LNP1 70 aa13.39□□□□□ -0.27
CCDC171-206ENST00000474193 A8MTW9 85 aa13.39□□□□□ -0.27
CCDC171-206ENST00000474193 GGTLC3B5MD39 225 aa13.39□□□□□ -0.27
CCDC171-206ENST00000474193 LEPP41159 167 aa13.39□□□□□ -0.27
CCDC171-206ENST00000474193 ERCC8Q13216 396 aa13.39□□□□□ -0.27
CCDC171-206ENST00000474193 C9orf47Q6ZRZ4 202 aa13.39□□□□□ -0.27
CCDC171-206ENST00000474193 GOLT1AQ6ZVE7 132 aa13.39□□□□□ -0.27
CCDC171-206ENST00000474193 DNAH1Q9P2D7 4330 aa13.38□□□□□ -0.27
CCDC171-206ENST00000474193 INSP01308 110 aa13.38□□□□□ -0.27
CCDC171-206ENST00000474193 TCRAP04437 139 aa13.38□□□□□ -0.27
CCDC171-206ENST00000474193 GNG5P63218 68 aa13.38□□□□□ -0.27
CCDC171-206ENST00000474193 SPINK13Q1W4C9 94 aa13.38□□□□□ -0.27
CCDC171-206ENST00000474193 C12orf74Q32Q52 190 aa13.38□□□□□ -0.27
CCDC171-206ENST00000474193 ZNF680Q8NEM1 530 aa13.38□□□□□ -0.27
CCDC171-206ENST00000474193 ODF3Q96PU9 254 aa13.38□□□□□ -0.27
CCDC171-206ENST00000474193 VGLL1Q99990 258 aa13.38□□□□□ -0.27
CCDC171-206ENST00000474193 TCEAL7Q9BRU2 100 aa13.38□□□□□ -0.27
CCDC171-206ENST00000474193 AGPAT4-IT1Q9H0P7 198 aa13.38□□□□□ -0.27
CCDC171-206ENST00000474193 M0R2Z0 102 aa13.37□□□□□ -0.27
CCDC171-206ENST00000474193 CT45A10P0DMU9 189 aa13.37□□□□□ -0.27
CCDC171-206ENST00000474193 CDKN1BP46527 198 aa13.37□□□□□ -0.27
CCDC171-206ENST00000474193 ZNF138P52744 262 aa13.37□□□□□ -0.27
CCDC171-206ENST00000474193 CCL20P78556 96 aa13.37□□□□□ -0.27
CCDC171-206ENST00000474193 AMTNQ6UX39 209 aa13.37□□□□□ -0.27
CCDC171-206ENST00000474193 CYB561D1Q8N8Q1 229 aa13.37□□□□□ -0.27
CCDC171-206ENST00000474193 HIST1H2BAQ96A08 127 aa13.37□□□□□ -0.27
CCDC171-206ENST00000474193 ATG101Q9BSB4 218 aa13.37□□□□□ -0.27
CCDC171-206ENST00000474193 CELA1Q9UNI1 258 aa13.37□□□□□ -0.27
CCDC171-206ENST00000474193 LOC102723971A0A1B0GUV8 181 aa13.36□□□□□ -0.27
CCDC171-206ENST00000474193 TAGLN2P37802 199 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms