RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 ITPR2Q14571 2701 aa5.71□□□□□ -1.49
GPNMB-209ENST00000474157 SMIM26A0A096LP01 95 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FAM236AA0A1B0GUQ0 79 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FAM236BA0A1B0GV22 79 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 RBAKDNA6NC62 111 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FAM90A10PA6NDY2 464 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FAM90A7PA6NKC0 464 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FAM90A22PA8MWA6 464 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FAM90A12PA8MX19 464 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FAM90A23PA8MXZ1 464 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 K7EM74 188 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 SLC25A20O43772 301 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FCGR3BO75015 233 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 IGLV2-14P01704 120 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 SLPIP03973 132 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FRMD6-AS1P0C7T7 363 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FAM90A13PP0C7W8 464 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FAM90A24PP0C7X0 464 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 CTLA4P16410 223 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 CD70P32970 193 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 SSR4P51571 173 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 UBE2L3P68036 154 aaKnown RBP5.71□□□□□ -1.5
GPNMB-209ENST00000474157 CCL8P80075 99 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 CST6Q15828 149 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 FHL5Q5TD97 284 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 MARCH3Q86UD3 253 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 SLC25A45Q8N413 288 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 RFESDQ8TAC1 157 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 TRGV9Q99603 122 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 PRRG4Q9BZD6 226 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 C6orf106Q9H6K1 298 aaPredicted RBP5.71□□□□□ -1.5
GPNMB-209ENST00000474157 EPDR1Q9UM22 224 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 SERP1Q9Y6X1 66 aa5.71□□□□□ -1.5
GPNMB-209ENST00000474157 KNL1Q8NG31 2342 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 TLN1Q9Y490 2541 aaKnown RBP5.7□□□□□ -1.5
GPNMB-209ENST00000474157 TRAV8-1A0A0A6YYK1 113 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 IGLV1-36A0A0B4J1U3 117 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 CHEK1O14757 476 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 CCL11P51671 97 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 FXYD4P59646 89 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 RPS18P62269 152 aaKnown RBP5.7□□□□□ -1.5
GPNMB-209ENST00000474157 Q6ZQT7 251 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 ZNF493Q6ZR52 646 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 Q6ZSR3 168 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 LINC00173Q6ZV60 143 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 RNF144BQ7Z419 303 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 FAM19A1Q7Z5A9 133 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 STHQ8IWL8 128 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 DRAM1Q8N682 238 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 PRSS3P2Q8NHM4 247 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 CNRIP1Q96F85 164 aaPredicted RBP5.7□□□□□ -1.5
GPNMB-209ENST00000474157 HIST1H4GQ99525 98 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 SHANK2-AS3Q9BTD1 123 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 TP73-AS1Q9UF72 201 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 LSM7Q9UK45 103 aaKnown RBP5.7□□□□□ -1.5
GPNMB-209ENST00000474157 SELENOKQ9Y6D0 94 aa5.7□□□□□ -1.5
GPNMB-209ENST00000474157 NBASA2RRP1 2371 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 TRBV7-3A0A075B6L6 115 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 A0A0D9SEW6 157 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 A0A0J9YW62 118 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 FAM236DA0A1B0GTK5 79 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 H0YIG0 161 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 H3BT86 120 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 ZFAND5O76080 213 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 CLDN14O95500 239 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 HBDP02042 147 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 FAM236CP0DP71 79 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 LEPP41159 167 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 UBE2D1P51668 147 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 PMAIP1Q13794 54 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 TWIST1Q15672 202 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 VMA21Q3ZAQ7 101 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 SPANXN5Q5MJ07 72 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 FAM201AQ5SY85 155 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 SFTPA2Q8IWL1 248 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 FAM110DQ8TAY7 271 aaPredicted RBP5.69□□□□□ -1.5
GPNMB-209ENST00000474157 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 ZNF492Q9P255 531 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 PKIGQ9Y2B9 76 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 TDRD6O60522 2096 aaKnown RBP5.69□□□□□ -1.5
GPNMB-209ENST00000474157 ICE1Q9Y2F5 2266 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 ZFHX3Q15911 3703 aa5.69□□□□□ -1.5
GPNMB-209ENST00000474157 MDC1Q14676 2089 aaKnown RBP5.68□□□□□ -1.5
GPNMB-209ENST00000474157 ABCA2Q9BZC7 2435 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 PCNX1Q96RV3 2341 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 IGKV1D-8A0A087WSZ0 117 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 SH2D7A6NKC9 451 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-209ENST00000474157 C15orf61A6NNL5 157 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 PMS2P5A8MQ11 134 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 SPINK4O60575 86 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 PROP1O75360 226 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 PGLYRP1O75594 196 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-209ENST00000474157 IGLV2-8P01709 118 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 ARL14EPLP0DKL9 152 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 DLX1P56177 255 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 PROK1P58294 105 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 KISS1Q15726 138 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 ZNF672Q499Z4 452 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-209ENST00000474157 TMEM52BQ4KMG9 183 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 GDF5OSQ5U4N7 250 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms