RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SYNJ2BPP57105 145 aa13.66□□□□□ -0.22
VARS2-206ENST00000473916 TMEM213A2RRL7 107 aa13.66□□□□□ -0.22
VARS2-206ENST00000473916 ZNF80P51504 273 aaPredicted RBP13.66□□□□□ -0.22
VARS2-206ENST00000473916 OR2D3Q8NGH3 330 aa13.66□□□□□ -0.22
VARS2-206ENST00000473916 HIVEP2P31629 2446 aa13.66□□□□□ -0.22
VARS2-206ENST00000473916 IFITM10A6NMD0 228 aa13.65□□□□□ -0.22
VARS2-206ENST00000473916 SNURFLB1AK76 121 aa13.65□□□□□ -0.22
VARS2-206ENST00000473916 HOXD3P31249 432 aaPredicted RBP13.65□□□□□ -0.22
VARS2-206ENST00000473916 PDZD11Q5EBL8 140 aa13.65□□□□□ -0.22
VARS2-206ENST00000473916 ARL6IP6Q8N6S5 226 aa13.65□□□□□ -0.22
VARS2-206ENST00000473916 DUX3Q96PT4 197 aa13.65□□□□□ -0.22
VARS2-206ENST00000473916 A0A1W2PS18 150 aa13.64□□□□□ -0.23
VARS2-206ENST00000473916 MRPL18Q9H0U6 180 aaKnown RBP13.64□□□□□ -0.23
VARS2-206ENST00000473916 NAT8BQ9UHF3 227 aa13.64□□□□□ -0.23
VARS2-206ENST00000473916 A0A1B0GUS0 222 aa13.64□□□□□ -0.23
VARS2-206ENST00000473916 K7EMT4 169 aa13.64□□□□□ -0.23
VARS2-206ENST00000473916 KHDC1LQ5JSQ8 128 aa13.64□□□□□ -0.23
VARS2-206ENST00000473916 GDF5OSQ5U4N7 250 aa13.64□□□□□ -0.23
VARS2-206ENST00000473916 TMEM136Q6ZRR5 245 aa13.64□□□□□ -0.23
VARS2-206ENST00000473916 AGPAT4-IT1Q9H0P7 198 aa13.64□□□□□ -0.23
VARS2-206ENST00000473916 SH2D1AO60880 128 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 LY6G6DO95868 133 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 HOXA5P20719 270 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 MEOX2P50222 304 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 SLURP1P55000 103 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 PGLYRP4Q96LB8 373 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 NRN1Q9NPD7 142 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 A8MWL6 223 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 RAB4BP61018 213 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 CT83Q5H943 113 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 C11orf44Q8N8P7 122 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 UFC1Q9Y3C8 167 aa13.63□□□□□ -0.23
VARS2-206ENST00000473916 CT45A10P0DMU9 189 aa13.62□□□□□ -0.23
VARS2-206ENST00000473916 ZNF738Q8NE65 137 aa13.62□□□□□ -0.23
VARS2-206ENST00000473916 TMSB15BA0A087X1C1 80 aa13.61□□□□□ -0.23
VARS2-206ENST00000473916 XKRY2A2RUG3 117 aa13.61□□□□□ -0.23
VARS2-206ENST00000473916 KIAA1644Q3SXP7 199 aa13.61□□□□□ -0.23
VARS2-206ENST00000473916 SAPCD1Q5SSQ6 148 aa13.61□□□□□ -0.23
VARS2-206ENST00000473916 MRPL53Q96EL3 112 aaKnown RBP13.61□□□□□ -0.23
VARS2-206ENST00000473916 GRIFINA4D1Z8 144 aa13.61□□□□□ -0.23
VARS2-206ENST00000473916 RBAKDNA6NC62 111 aa13.61□□□□□ -0.23
VARS2-206ENST00000473916 GNB1LQ9BYB4 327 aa13.61□□□□□ -0.23
VARS2-206ENST00000473916 F6UB75 175 aa13.6□□□□□ -0.23
VARS2-206ENST00000473916 FAM162BQ5T6X4 162 aa13.6□□□□□ -0.23
VARS2-206ENST00000473916 COX8CQ7Z4L0 72 aa13.6□□□□□ -0.23
VARS2-206ENST00000473916 WFDC3Q8IUB2 231 aa13.6□□□□□ -0.23
VARS2-206ENST00000473916 OR4B1Q8NGF8 309 aa13.6□□□□□ -0.23
VARS2-206ENST00000473916 SSBP4Q9BWG4 385 aaPredicted RBP13.6□□□□□ -0.23
VARS2-206ENST00000473916 A8MWP6 167 aa13.59□□□□□ -0.23
VARS2-206ENST00000473916 CAMPP49913 170 aa13.59□□□□□ -0.23
VARS2-206ENST00000473916 Q6ZQT7 251 aa13.59□□□□□ -0.23
VARS2-206ENST00000473916 REC114Q7Z4M0 266 aa13.59□□□□□ -0.23
VARS2-206ENST00000473916 HIST3H2BBQ8N257 126 aa13.59□□□□□ -0.23
VARS2-206ENST00000473916 SETXQ7Z333 2677 aaKnown RBP13.59□□□□□ -0.23
VARS2-206ENST00000473916 HIVEP1P15822 2718 aa13.59□□□□□ -0.23
VARS2-206ENST00000473916 A0A1B0GXF2 115 aa13.59□□□□□ -0.23
VARS2-206ENST00000473916 RNASE1P07998 156 aaKnown RBP13.59□□□□□ -0.23
VARS2-206ENST00000473916 CDX1P47902 265 aaPredicted RBP13.59□□□□□ -0.23
VARS2-206ENST00000473916 SLAQ13239 276 aa13.59□□□□□ -0.23
VARS2-206ENST00000473916 ADAMTSL5Q6ZMM2 481 aa13.59□□□□□ -0.23
VARS2-206ENST00000473916 KLHL30-AS1Q8NEE0 82 aa13.59□□□□□ -0.23
VARS2-206ENST00000473916 OR11H1Q8NG94 326 aa13.59□□□□□ -0.23
VARS2-206ENST00000473916 WIPF2Q8TF74 440 aaPredicted RBP13.59□□□□□ -0.23
VARS2-206ENST00000473916 FBLL1A6NHQ2 334 aaKnown RBP13.58□□□□□ -0.24
VARS2-206ENST00000473916 TFPI2P48307 235 aa13.58□□□□□ -0.24
VARS2-206ENST00000473916 KLF5Q13887 457 aaPredicted RBP13.58□□□□□ -0.24
VARS2-206ENST00000473916 RBPMS2Q6ZRY4 209 aaKnown RBP13.58□□□□□ -0.24
VARS2-206ENST00000473916 SORL1Q92673 2214 aa13.58□□□□□ -0.24
VARS2-206ENST00000473916 WNK1Q9H4A3 2382 aa13.58□□□□□ -0.24
VARS2-206ENST00000473916 C2orf70A6NJV1 201 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 TMEM78Q5T7P6 136 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 WDR73Q6P4I2 378 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 C9orf47Q6ZRZ4 202 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 ZNF575Q86XF7 245 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 DCANP1Q8TF63 244 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 C4orf3Q8WVX3 66 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 NDFIP1Q9BT67 221 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 GFRA4Q9GZZ7 299 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 LGALS9O00182 355 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 ZNF138P52744 262 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 SRSF2Q01130 221 aaKnown RBP13.57□□□□□ -0.24
VARS2-206ENST00000473916 PRR9Q5T870 116 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 TPPP3Q9BW30 176 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 TMEM160Q9NX00 188 aa13.57□□□□□ -0.24
VARS2-206ENST00000473916 NSD1Q96L73 2696 aaPredicted RBP13.57□□□□□ -0.24
VARS2-206ENST00000473916 A0A1W2PRX2 142 aa13.56□□□□□ -0.24
VARS2-206ENST00000473916 F2Z2F3 143 aa13.56□□□□□ -0.24
VARS2-206ENST00000473916 CD28P10747 220 aa13.56□□□□□ -0.24
VARS2-206ENST00000473916 MS4A6AQ9H2W1 248 aa13.56□□□□□ -0.24
VARS2-206ENST00000473916 TMEM189A5PLL7 270 aa13.56□□□□□ -0.24
VARS2-206ENST00000473916 LINC01619G3V211 115 aa13.56□□□□□ -0.24
VARS2-206ENST00000473916 J3KRW8 73 aa13.56□□□□□ -0.24
VARS2-206ENST00000473916 HILS1P60008 231 aa13.56□□□□□ -0.24
VARS2-206ENST00000473916 TMEM256Q8N2U0 113 aa13.56□□□□□ -0.24
VARS2-206ENST00000473916 LINC01006Q8NI28 216 aa13.56□□□□□ -0.24
VARS2-206ENST00000473916 TP53TG3Q9ULZ0 132 aa13.56□□□□□ -0.24
VARS2-206ENST00000473916 NUPR1O60356 82 aa13.55□□□□□ -0.24
VARS2-206ENST00000473916 HLA-DQA1P01909 254 aa13.55□□□□□ -0.24
VARS2-206ENST00000473916 MT-ND6P03923 174 aa13.55□□□□□ -0.24
VARS2-206ENST00000473916 ARMS2P0C7Q2 107 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms