RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 SAMD5Q5TGI4 173 aa11.09□□□□□ -0.63
NHLRC3-204ENST00000473371 NEGR1Q7Z3B1 354 aa11.09□□□□□ -0.63
NHLRC3-204ENST00000473371 ARPC1AQ92747 370 aa11.09□□□□□ -0.63
NHLRC3-204ENST00000473371 ZNF48Q96MX3 618 aaPredicted RBP11.09□□□□□ -0.63
NHLRC3-204ENST00000473371 TTTY13Q9BZ97 58 aa11.09□□□□□ -0.63
NHLRC3-204ENST00000473371 DCHS1Q96JQ0 3298 aa11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 APC2O95996 2303 aa11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 TNFRSF6BO95407 300 aa11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 CEACAM3P40198 252 aa11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 C1orf122Q6ZSJ8 110 aa11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 DMXL2Q8TDJ6 3036 aa11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 IGHV3OR16-8A0A075B7F1 116 aa11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 FABP5P3A8MUU1 101 aa11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 KLRD1Q13241 179 aa11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 SMAD5-AS1Q9Y6J3 95 aa11.08□□□□□ -0.64
NHLRC3-204ENST00000473371 PPIFP30405 207 aaKnown RBP11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 FXYD2P54710 66 aa11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 FOXC2Q99958 501 aa11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 NCBP2LA6PVI3 153 aaKnown RBP11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 IGKCP01834 107 aa11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 PSMG4Q5JS54 123 aa11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 PIFOQ8TCI5 191 aa11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 GATA1P15976 413 aaPredicted RBP11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 ERCC8Q13216 396 aa11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 CHAC1Q9BUX1 264 aa11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 HIGD1BQ9P298 99 aa11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 ARHGAP32A7KAX9 2087 aa11.07□□□□□ -0.64
NHLRC3-204ENST00000473371 IGHV3-35A0A0C4DH35 117 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 SCGB2A1O75556 95 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 IGHG4P01861 327 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 ZNF562Q6V9R5 426 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 GTSCR1Q86UQ5 136 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 ZNF575Q86XF7 245 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 TMEM158Q8WZ71 300 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 HHLA3Q9XRX5 114 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 NDPQ00604 133 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 SRSF2Q01130 221 aaKnown RBP11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 TTC9CQ8N5M4 171 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 OR11H6Q8NGC7 330 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 ZMAT4Q9H898 229 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 LAMA5O15230 3695 aa11.06□□□□□ -0.64
NHLRC3-204ENST00000473371 TMEM238C9JI98 176 aa11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 ZNF672Q499Z4 452 aaPredicted RBP11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 LY6G5BQ8NDX9 201 aa11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 ADGRG4Q8IZF6 3080 aa11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 ACACAQ13085 2346 aa11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 RPL24P83731 157 aaKnown RBP11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 DYNAPQ8N1N2 210 aa11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 CNFNQ9BYD5 112 aa11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 GVINP1Q7Z2Y8 2422 aa11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 K7ERJ3 54 aa11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 DPM2O94777 84 aa11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 CTSGP08311 255 aa11.05□□□□□ -0.64
NHLRC3-204ENST00000473371 ZC2HC1BQ5TFG8 222 aa11.04□□□□□ -0.64
NHLRC3-204ENST00000473371 PRAC2D3DTV9 90 aa11.04□□□□□ -0.64
NHLRC3-204ENST00000473371 ATP5LO75964 103 aa11.04□□□□□ -0.64
NHLRC3-204ENST00000473371 LINC01560Q8TB33 94 aa11.04□□□□□ -0.64
NHLRC3-204ENST00000473371 TRBV25-1A0A075B6N4 114 aa11.03□□□□□ -0.64
NHLRC3-204ENST00000473371 DTX2Q86UW9 622 aa11.03□□□□□ -0.64
NHLRC3-204ENST00000473371 TMEM160Q9NX00 188 aa11.03□□□□□ -0.64
NHLRC3-204ENST00000473371 NHP2Q9NX24 153 aaKnown RBP11.03□□□□□ -0.64
NHLRC3-204ENST00000473371 SMPXQ9UHP9 88 aa11.03□□□□□ -0.64
NHLRC3-204ENST00000473371 LINC01559Q495D7 138 aa11.03□□□□□ -0.64
NHLRC3-204ENST00000473371 Q8N8P6 123 aa11.03□□□□□ -0.64
NHLRC3-204ENST00000473371 TMEM8BA6NDV4 472 aa11.03□□□□□ -0.64
NHLRC3-204ENST00000473371 LY6HO94772 140 aa11.03□□□□□ -0.64
NHLRC3-204ENST00000473371 Q8NA96 180 aa11.03□□□□□ -0.64
NHLRC3-204ENST00000473371 TACC2O95359 2948 aa11.02□□□□□ -0.64
NHLRC3-204ENST00000473371 SMIM17P0DL12 118 aa11.02□□□□□ -0.64
NHLRC3-204ENST00000473371 IL17RELQ6ZVW7 336 aa11.02□□□□□ -0.64
NHLRC3-204ENST00000473371 RNF182Q8N6D2 247 aa11.02□□□□□ -0.64
NHLRC3-204ENST00000473371 PRR30Q53SZ7 412 aaPredicted RBP11.02□□□□□ -0.65
NHLRC3-204ENST00000473371 CEND1Q8N111 149 aa11.01□□□□□ -0.65
NHLRC3-204ENST00000473371 ANKRD11Q6UB99 2663 aaPredicted RBP11.01□□□□□ -0.65
NHLRC3-204ENST00000473371 TRAV40A0A0B4J280 105 aa11.01□□□□□ -0.65
NHLRC3-204ENST00000473371 MYOZ3Q8TDC0 251 aa11.01□□□□□ -0.65
NHLRC3-204ENST00000473371 PSMG3-AS1Q96PY0 264 aa11.01□□□□□ -0.65
NHLRC3-204ENST00000473371 WNK2Q9Y3S1 2297 aa11.01□□□□□ -0.65
NHLRC3-204ENST00000473371 ODF3BA8MYP8 253 aa11.01□□□□□ -0.65
NHLRC3-204ENST00000473371 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
NHLRC3-204ENST00000473371 PIEZO2Q9H5I5 2752 aa11.01□□□□□ -0.65
NHLRC3-204ENST00000473371 TEX48A0A1B0GUV7 120 aa11□□□□□ -0.65
NHLRC3-204ENST00000473371 K7EMI3 77 aa11□□□□□ -0.65
NHLRC3-204ENST00000473371 TRGV3P03979 118 aa11□□□□□ -0.65
NHLRC3-204ENST00000473371 IGHV3-66A0A0C4DH42 116 aa11□□□□□ -0.65
NHLRC3-204ENST00000473371 PRTN3P24158 256 aa11□□□□□ -0.65
NHLRC3-204ENST00000473371 PHLDA1Q8WV24 401 aaPredicted RBP11□□□□□ -0.65
NHLRC3-204ENST00000473371 IGKV3D-20A0A0C4DH25 116 aa10.99□□□□□ -0.65
NHLRC3-204ENST00000473371 M0R1W7 72 aa10.99□□□□□ -0.65
NHLRC3-204ENST00000473371 CCDC144NLQ6NUI1 221 aa10.99□□□□□ -0.65
NHLRC3-204ENST00000473371 TIMD4Q96H15 378 aa10.99□□□□□ -0.65
NHLRC3-204ENST00000473371 TM2D2Q9BX73 214 aa10.99□□□□□ -0.65
NHLRC3-204ENST00000473371 UFC1Q9Y3C8 167 aa10.99□□□□□ -0.65
NHLRC3-204ENST00000473371 IGLV2-18A0A075B6J9 118 aa10.99□□□□□ -0.65
NHLRC3-204ENST00000473371 DMXL1Q9Y485 3027 aa10.99□□□□□ -0.65
NHLRC3-204ENST00000473371 LAGE3Q14657 143 aa10.99□□□□□ -0.65
NHLRC3-204ENST00000473371 VMO1Q7Z5L0 202 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms