RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 DIRC3C9JPN6 131 aa15.06■□□□□ 0
TOP3A-204ENST00000472959 ERCC8Q13216 396 aa15.06■□□□□ 0
TOP3A-204ENST00000472959 TMEM78Q5T7P6 136 aa15.06■□□□□ 0
TOP3A-204ENST00000472959 C1orf158Q8N1D5 194 aa15.06■□□□□ 0
TOP3A-204ENST00000472959 C11orf68Q9H3H3 251 aaKnown RBP15.06■□□□□ 0
TOP3A-204ENST00000472959 FGF8P55075 233 aaPredicted RBP15.05■□□□□ -0
TOP3A-204ENST00000472959 Q8NAQ8 132 aa15.05■□□□□ -0
TOP3A-204ENST00000472959 SFT2D1Q8WV19 159 aa15.05■□□□□ -0
TOP3A-204ENST00000472959 VGLL1Q99990 258 aa15.05■□□□□ -0
TOP3A-204ENST00000472959 TRAV12-2A0A075B6T6 113 aa15.04■□□□□ -0
TOP3A-204ENST00000472959 IGHV3OR16-12A0A075B7B8 117 aa15.04■□□□□ -0
TOP3A-204ENST00000472959 NMBP08949 121 aa15.04■□□□□ -0
TOP3A-204ENST00000472959 TMEM256Q8N2U0 113 aa15.04■□□□□ -0
TOP3A-204ENST00000472959 C5orf17Q8NAS9 161 aa15.04■□□□□ -0
TOP3A-204ENST00000472959 IL17DQ8TAD2 202 aa15.04■□□□□ -0
TOP3A-204ENST00000472959 FAM19A4Q96LR4 140 aa15.04■□□□□ -0
TOP3A-204ENST00000472959 C20orf144Q9BQM9 153 aa15.04■□□□□ -0
TOP3A-204ENST00000472959 TMEM208Q9BTX3 173 aa15.04■□□□□ -0
TOP3A-204ENST00000472959 NKX6-2Q9C056 277 aaPredicted RBP15.04■□□□□ -0
TOP3A-204ENST00000472959 TMPRSS5Q9H3S3 457 aa15.04■□□□□ -0
TOP3A-204ENST00000472959 IGHV4-28A0A0C4DH34 117 aa15.03■□□□□ -0
TOP3A-204ENST00000472959 TRBV7-9A0A0J9YWB2 115 aa15.03■□□□□ -0
TOP3A-204ENST00000472959 SERTM2A0A1B0GWG4 89 aa15.03■□□□□ -0
TOP3A-204ENST00000472959 H2AFB1P0C5Y9 115 aa15.03■□□□□ -0
TOP3A-204ENST00000472959 ZNF138P52744 262 aa15.03■□□□□ -0
TOP3A-204ENST00000472959 SUMO1P63165 101 aaKnown RBP15.03■□□□□ -0
TOP3A-204ENST00000472959 ZNF492Q9P255 531 aa15.03■□□□□ -0
TOP3A-204ENST00000472959 HBE1P02100 147 aa15.02■□□□□ -0
TOP3A-204ENST00000472959 CRISP2P16562 243 aa15.02■□□□□ -0
TOP3A-204ENST00000472959 SULT1A2P50226 295 aa15.02■□□□□ -0
TOP3A-204ENST00000472959 NKX2-5P52952 324 aaPredicted RBP15.02■□□□□ -0
TOP3A-204ENST00000472959 MUC7Q8TAX7 377 aa15.02■□□□□ -0
TOP3A-204ENST00000472959 GGTLC3B5MD39 225 aa15.01□□□□□ -0.01
TOP3A-204ENST00000472959 GOLT1AQ6ZVE7 132 aa15.01□□□□□ -0.01
TOP3A-204ENST00000472959 EPDR1Q9UM22 224 aa15.01□□□□□ -0.01
TOP3A-204ENST00000472959 RPH3ALQ9UNE2 315 aa15.01□□□□□ -0.01
TOP3A-204ENST00000472959 YTHDF2Q9Y5A9 579 aaKnown RBP15.01□□□□□ -0.01
TOP3A-204ENST00000472959 LENEPQ9Y5L5 61 aa15.01□□□□□ -0.01
TOP3A-204ENST00000472959 ARL2-SNX15V9GYD0 113 aa15.01□□□□□ -0.01
TOP3A-204ENST00000472959 KLLNB2CW77 178 aa15□□□□□ -0.01
TOP3A-204ENST00000472959 K7EQM0 130 aa15□□□□□ -0.01
TOP3A-204ENST00000472959 TCRAP04437 139 aa15□□□□□ -0.01
TOP3A-204ENST00000472959 RBMY1A1P0DJD3 496 aaKnown RBP15□□□□□ -0.01
TOP3A-204ENST00000472959 RBMY1CP0DJD4 496 aa15□□□□□ -0.01
TOP3A-204ENST00000472959 UBE2G2P60604 165 aa15□□□□□ -0.01
TOP3A-204ENST00000472959 RBMY1FQ15415 496 aaKnown RBP15□□□□□ -0.01
TOP3A-204ENST00000472959 GFI1BQ5VTD9 330 aa15□□□□□ -0.01
TOP3A-204ENST00000472959 LINC01587Q99440 93 aa15□□□□□ -0.01
TOP3A-204ENST00000472959 TRAV1-1A0A0B4J248 108 aa14.99□□□□□ -0.01
TOP3A-204ENST00000472959 TMEM189A5PLL7 270 aa14.99□□□□□ -0.01
TOP3A-204ENST00000472959 FAM74A7A6NL05 159 aa14.99□□□□□ -0.01
TOP3A-204ENST00000472959 C3orf84H3BNL1 204 aa14.99□□□□□ -0.01
TOP3A-204ENST00000472959 H7BYZ3 331 aa14.99□□□□□ -0.01
TOP3A-204ENST00000472959 DEFB4AO15263 64 aa14.99□□□□□ -0.01
TOP3A-204ENST00000472959 PPT1P50897 306 aa14.99□□□□□ -0.01
TOP3A-204ENST00000472959 GNG5P63218 68 aa14.99□□□□□ -0.01
TOP3A-204ENST00000472959 KIR3DS1Q14943 382 aa14.99□□□□□ -0.01
TOP3A-204ENST00000472959 RRN3P1Q2M238 152 aa14.99□□□□□ -0.01
TOP3A-204ENST00000472959 TEX46H3BTG2 121 aa14.98□□□□□ -0.01
TOP3A-204ENST00000472959 IFNA7P01567 189 aa14.98□□□□□ -0.01
TOP3A-204ENST00000472959 GPX1P07203 203 aa14.98□□□□□ -0.01
TOP3A-204ENST00000472959 TAS2R60P59551 318 aa14.98□□□□□ -0.01
TOP3A-204ENST00000472959 ZFAND2AQ8N6M9 145 aa14.98□□□□□ -0.01
TOP3A-204ENST00000472959 Q8TAT8 98 aa14.98□□□□□ -0.01
TOP3A-204ENST00000472959 C7orf71A4D174 169 aa14.97□□□□□ -0.01
TOP3A-204ENST00000472959 FBLL1A6NHQ2 334 aaKnown RBP14.97□□□□□ -0.01
TOP3A-204ENST00000472959 J3KRW8 73 aa14.97□□□□□ -0.01
TOP3A-204ENST00000472959 CYB561D1Q8N8Q1 229 aa14.97□□□□□ -0.01
TOP3A-204ENST00000472959 TCEAL7Q9BRU2 100 aa14.97□□□□□ -0.01
TOP3A-204ENST00000472959 NIPSNAP3BQ9BS92 247 aa14.97□□□□□ -0.01
TOP3A-204ENST00000472959 ATG101Q9BSB4 218 aa14.97□□□□□ -0.01
TOP3A-204ENST00000472959 TRAV12-3A0A0B4J271 114 aa14.96□□□□□ -0.01
TOP3A-204ENST00000472959 LOC102723971A0A1B0GUV8 181 aa14.96□□□□□ -0.01
TOP3A-204ENST00000472959 RNASE4P34096 147 aaKnown RBP14.96□□□□□ -0.01
TOP3A-204ENST00000472959 C11orf45Q8TAV5 145 aa14.96□□□□□ -0.01
TOP3A-204ENST00000472959 HIST1H2BAQ96A08 127 aa14.96□□□□□ -0.01
TOP3A-204ENST00000472959 BOLA1Q9Y3E2 137 aa14.96□□□□□ -0.01
TOP3A-204ENST00000472959 A0A1B0GV50 99 aa14.95□□□□□ -0.02
TOP3A-204ENST00000472959 ZNF705GA8MUZ8 300 aaPredicted RBP14.95□□□□□ -0.02
TOP3A-204ENST00000472959 CST9LP1Q5W188 147 aa14.95□□□□□ -0.02
TOP3A-204ENST00000472959 TRAV8-1A0A0A6YYK1 113 aa14.94□□□□□ -0.02
TOP3A-204ENST00000472959 F6UZH7 168 aa14.94□□□□□ -0.02
TOP3A-204ENST00000472959 PAGE4O60829 102 aa14.94□□□□□ -0.02
TOP3A-204ENST00000472959 CCDC28AQ8IWP9 274 aa14.94□□□□□ -0.02
TOP3A-204ENST00000472959 PYGO2Q9BRQ0 406 aa14.94□□□□□ -0.02
TOP3A-204ENST00000472959 PEX7O00628 323 aa14.93□□□□□ -0.02
TOP3A-204ENST00000472959 ZNF324O75467 553 aaPredicted RBP14.93□□□□□ -0.02
TOP3A-204ENST00000472959 BTN1A1Q13410 526 aa14.93□□□□□ -0.02
TOP3A-204ENST00000472959 ALKAL2Q6UX46 152 aa14.93□□□□□ -0.02
TOP3A-204ENST00000472959 ZNF493Q6ZR52 646 aa14.93□□□□□ -0.02
TOP3A-204ENST00000472959 TMEM75Q8N9X5 138 aa14.93□□□□□ -0.02
TOP3A-204ENST00000472959 NDFIP1Q9BT67 221 aa14.93□□□□□ -0.02
TOP3A-204ENST00000472959 TEX48A0A1B0GUV7 120 aa14.92□□□□□ -0.02
TOP3A-204ENST00000472959 CXorf65A6NEN9 183 aa14.92□□□□□ -0.02
TOP3A-204ENST00000472959 IGLV2-11P01706 119 aa14.92□□□□□ -0.02
TOP3A-204ENST00000472959 HTN1P15515 57 aa14.92□□□□□ -0.02
TOP3A-204ENST00000472959 EMP1P54849 157 aa14.92□□□□□ -0.02
TOP3A-204ENST00000472959 FLI1Q01543 452 aaPredicted RBP14.92□□□□□ -0.02
TOP3A-204ENST00000472959 PRR9Q5T870 116 aa14.92□□□□□ -0.02
TOP3A-204ENST00000472959 LINC00467Q9BRT7 94 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms