RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 CT45A10P0DMU9 189 aa10.26□□□□□ -0.77
BRCA1-211ENST00000472490 PRB4P10163 310 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-211ENST00000472490 TPT1P13693 172 aaKnown RBP10.26□□□□□ -0.77
BRCA1-211ENST00000472490 GCHFRP30047 84 aa10.26□□□□□ -0.77
BRCA1-211ENST00000472490 RBMY1FQ15415 496 aaKnown RBP10.26□□□□□ -0.77
BRCA1-211ENST00000472490 ZFAND6Q6FIF0 208 aa10.26□□□□□ -0.77
BRCA1-211ENST00000472490 EIF5AL1Q6IS14 154 aaKnown RBP10.26□□□□□ -0.77
BRCA1-211ENST00000472490 IQCF2Q8IXL9 164 aa10.26□□□□□ -0.77
BRCA1-211ENST00000472490 STOML3Q8TAV4 291 aa10.26□□□□□ -0.77
BRCA1-211ENST00000472490 TRBV7-9A0A0J9YWB2 115 aa10.25□□□□□ -0.77
BRCA1-211ENST00000472490 NUPR2A6NF83 97 aa10.25□□□□□ -0.77
BRCA1-211ENST00000472490 H7BYZ3 331 aa10.25□□□□□ -0.77
BRCA1-211ENST00000472490 NMBP08949 121 aa10.25□□□□□ -0.77
BRCA1-211ENST00000472490 TAS2R60P59551 318 aa10.25□□□□□ -0.77
BRCA1-211ENST00000472490 SUN5Q8TC36 379 aa10.25□□□□□ -0.77
BRCA1-211ENST00000472490 LINC01587Q99440 93 aa10.25□□□□□ -0.77
BRCA1-211ENST00000472490 AGPAT4-IT1Q9H0P7 198 aa10.25□□□□□ -0.77
BRCA1-211ENST00000472490 IGKV2-40A0A087WW87 121 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-211ENST00000472490 LOC102723971A0A1B0GUV8 181 aa10.24□□□□□ -0.77
BRCA1-211ENST00000472490 SERTM2A0A1B0GWG4 89 aa10.24□□□□□ -0.77
BRCA1-211ENST00000472490 DIRC3C9JPN6 131 aa10.24□□□□□ -0.77
BRCA1-211ENST00000472490 IGKV2D-40P01614 121 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-211ENST00000472490 ZNF138P52744 262 aa10.24□□□□□ -0.77
BRCA1-211ENST00000472490 ERCC8Q13216 396 aa10.24□□□□□ -0.77
BRCA1-211ENST00000472490 PMS2P11Q13670 270 aa10.24□□□□□ -0.77
BRCA1-211ENST00000472490 DPPA3Q6W0C5 159 aa10.24□□□□□ -0.77
BRCA1-211ENST00000472490 NIPSNAP3BQ9BS92 247 aa10.24□□□□□ -0.77
BRCA1-211ENST00000472490 NKX6-2Q9C056 277 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-211ENST00000472490 ZNF492Q9P255 531 aa10.24□□□□□ -0.77
BRCA1-211ENST00000472490 K7EQM0 130 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 SPART-AS1P0CW21 52 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 CRISP2P16562 243 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 EMP1P54849 157 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 ZNF726P1Q15940 193 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 LGALSLQ3ZCW2 172 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-211ENST00000472490 ZFP69Q49AA0 526 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 GFI1BQ5VTD9 330 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 CCDC28AQ8IWP9 274 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 C5orf17Q8NAS9 161 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 TMED6Q8WW62 240 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 VGLL1Q99990 258 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 KLK5Q9Y337 293 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-211ENST00000472490 LENEPQ9Y5L5 61 aa10.23□□□□□ -0.77
BRCA1-211ENST00000472490 A0A1W2PRE2 83 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 MAP1LC3B2A6NCE7 125 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 KLLNB2CW77 178 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 C11orf94C9JXX5 98 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 J3KRW8 73 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 GPX1P07203 203 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 HTN1P15515 57 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 NANOS2P60321 138 aaKnown RBP10.22□□□□□ -0.77
BRCA1-211ENST00000472490 FAM19A4Q96LR4 140 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 MAP1LC3BQ9GZQ8 125 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 RPH3ALQ9UNE2 315 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 AGRNO00468 2067 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
BRCA1-211ENST00000472490 TRAV12-3A0A0B4J271 114 aa10.21□□□□□ -0.77
BRCA1-211ENST00000472490 C7orf71A4D174 169 aa10.21□□□□□ -0.77
BRCA1-211ENST00000472490 ZNF705GA8MUZ8 300 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-211ENST00000472490 RAB5CP51148 216 aa10.21□□□□□ -0.77
BRCA1-211ENST00000472490 SUMO1P63165 101 aaKnown RBP10.21□□□□□ -0.77
BRCA1-211ENST00000472490 CEMP1Q6PRD7 247 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-211ENST00000472490 ZNF493Q6ZR52 646 aa10.21□□□□□ -0.77
BRCA1-211ENST00000472490 SSX7Q7RTT5 188 aa10.21□□□□□ -0.77
BRCA1-211ENST00000472490 SLC51BQ86UW2 128 aa10.21□□□□□ -0.77
BRCA1-211ENST00000472490 PHLDA1Q8WV24 401 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-211ENST00000472490 C16orf74Q96GX8 76 aa10.21□□□□□ -0.77
BRCA1-211ENST00000472490 PYGO2Q9BRQ0 406 aa10.21□□□□□ -0.77
BRCA1-211ENST00000472490 YTHDF2Q9Y5A9 579 aaKnown RBP10.21□□□□□ -0.77
BRCA1-211ENST00000472490 STAB2Q8WWQ8 2551 aa10.21□□□□□ -0.78
BRCA1-211ENST00000472490 FBLL1A6NHQ2 334 aaKnown RBP10.2□□□□□ -0.78
BRCA1-211ENST00000472490 FGF8P55075 233 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-211ENST00000472490 GOLT1AQ6ZVE7 132 aa10.2□□□□□ -0.78
BRCA1-211ENST00000472490 FAM213BQ8TBF2 198 aa10.2□□□□□ -0.78
BRCA1-211ENST00000472490 TMEM263Q8WUH6 116 aaKnown RBP10.2□□□□□ -0.78
BRCA1-211ENST00000472490 TENM3Q9P273 2699 aa10.2□□□□□ -0.78
BRCA1-211ENST00000472490 TEX46H3BTG2 121 aa10.19□□□□□ -0.78
BRCA1-211ENST00000472490 TCRAP04437 139 aa10.19□□□□□ -0.78
BRCA1-211ENST00000472490 RNASE4P34096 147 aaKnown RBP10.19□□□□□ -0.78
BRCA1-211ENST00000472490 KIR3DS1Q14943 382 aa10.19□□□□□ -0.78
BRCA1-211ENST00000472490 ZFAND2AQ8N6M9 145 aa10.19□□□□□ -0.78
BRCA1-211ENST00000472490 Q8TAT8 98 aa10.19□□□□□ -0.78
BRCA1-211ENST00000472490 SFT2D1Q8WV19 159 aa10.19□□□□□ -0.78
BRCA1-211ENST00000472490 NDFIP1Q9BT67 221 aa10.19□□□□□ -0.78
BRCA1-211ENST00000472490 DKK2Q9UBU2 259 aa10.19□□□□□ -0.78
BRCA1-211ENST00000472490 EPDR1Q9UM22 224 aa10.19□□□□□ -0.78
BRCA1-211ENST00000472490 TRAV10A0A0B4J240 114 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 LYRM9A8MSI8 78 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 GGTLC3B5MD39 225 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 IFNA7P01567 189 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 H2AFB1P0C5Y9 115 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 FHITP49789 147 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 PPT1P50897 306 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 BTN1A1Q13410 526 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 FAM222AQ5U5X8 452 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 MBD3L1Q8WWY6 194 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 TCEAL7Q9BRU2 100 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 ATG101Q9BSB4 218 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 TMPRSS5Q9H3S3 457 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 TIMM8BQ9Y5J9 83 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms