RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PXDC1Q5TGL8 231 aa12.63□□□□□ -0.39
SORT1-203ENST00000471996 TOMM5Q8N4H5 51 aa12.63□□□□□ -0.39
SORT1-203ENST00000471996 PCNPQ8WW12 178 aaKnown RBP12.63□□□□□ -0.39
SORT1-203ENST00000471996 RBM38Q9H0Z9 239 aaKnown RBP12.63□□□□□ -0.39
SORT1-203ENST00000471996 TP53TG3Q9ULZ0 132 aa12.63□□□□□ -0.39
SORT1-203ENST00000471996 IGHV3-38A0A0C4DH36 116 aa12.62□□□□□ -0.39
SORT1-203ENST00000471996 H3BQ15 152 aa12.62□□□□□ -0.39
SORT1-203ENST00000471996 MPDU1O75352 247 aa12.62□□□□□ -0.39
SORT1-203ENST00000471996 SCXQ7RTU7 201 aa12.62□□□□□ -0.39
SORT1-203ENST00000471996 IQCF2Q8IXL9 164 aa12.62□□□□□ -0.39
SORT1-203ENST00000471996 ORM1P02763 201 aa12.61□□□□□ -0.39
SORT1-203ENST00000471996 RNASE4P34096 147 aaKnown RBP12.61□□□□□ -0.39
SORT1-203ENST00000471996 SLC38A11Q08AI6 406 aa12.61□□□□□ -0.39
SORT1-203ENST00000471996 TRIM63Q969Q1 353 aa12.61□□□□□ -0.39
SORT1-203ENST00000471996 FAM19A4Q96LR4 140 aa12.61□□□□□ -0.39
SORT1-203ENST00000471996 SLC25A21Q9BQT8 299 aaPredicted RBP12.61□□□□□ -0.39
SORT1-203ENST00000471996 TXNDC17Q9BRA2 123 aa12.61□□□□□ -0.39
SORT1-203ENST00000471996 Q9HAA7 133 aa12.61□□□□□ -0.39
SORT1-203ENST00000471996 NPVFQ9HCQ7 196 aa12.61□□□□□ -0.39
SORT1-203ENST00000471996 V9GYH0 126 aa12.61□□□□□ -0.39
SORT1-203ENST00000471996 RRAS2P62070 204 aaPredicted RBP12.6□□□□□ -0.39
SORT1-203ENST00000471996 ERCC8Q13216 396 aa12.6□□□□□ -0.39
SORT1-203ENST00000471996 LINC01556Q5JQF7 62 aa12.6□□□□□ -0.39
SORT1-203ENST00000471996 SPANXN2Q5MJ10 180 aa12.6□□□□□ -0.39
SORT1-203ENST00000471996 MORN5Q5VZ52 161 aa12.6□□□□□ -0.39
SORT1-203ENST00000471996 RNF213Q63HN8 5207 aa12.59□□□□□ -0.39
SORT1-203ENST00000471996 SFTA3P0C7M3 94 aa12.59□□□□□ -0.39
SORT1-203ENST00000471996 OPCMLQ14982 345 aa12.59□□□□□ -0.39
SORT1-203ENST00000471996 TMEM128Q5BJH2 165 aa12.59□□□□□ -0.39
SORT1-203ENST00000471996 TMEM37Q8WXS4 190 aa12.59□□□□□ -0.39
SORT1-203ENST00000471996 ZNF479Q96JC4 524 aa12.59□□□□□ -0.39
SORT1-203ENST00000471996 LINC00477Q96M19 166 aa12.59□□□□□ -0.39
SORT1-203ENST00000471996 PSENENQ9NZ42 101 aa12.59□□□□□ -0.39
SORT1-203ENST00000471996 FNDC10F2Z333 226 aa12.58□□□□□ -0.4
SORT1-203ENST00000471996 GOSR2O14653 212 aa12.58□□□□□ -0.4
SORT1-203ENST00000471996 RGS13O14921 159 aa12.58□□□□□ -0.4
SORT1-203ENST00000471996 OR4E1P0C645 316 aa12.58□□□□□ -0.4
SORT1-203ENST00000471996 WFDC2Q14508 124 aa12.58□□□□□ -0.4
SORT1-203ENST00000471996 GUK1Q16774 197 aa12.58□□□□□ -0.4
SORT1-203ENST00000471996 ARPC5LQ9BPX5 153 aa12.58□□□□□ -0.4
SORT1-203ENST00000471996 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
SORT1-203ENST00000471996 COX7A2P2O60397 106 aa12.57□□□□□ -0.4
SORT1-203ENST00000471996 CCNKO75909 580 aa12.57□□□□□ -0.4
SORT1-203ENST00000471996 GPX1P07203 203 aa12.57□□□□□ -0.4
SORT1-203ENST00000471996 CRISP2P16562 243 aa12.57□□□□□ -0.4
SORT1-203ENST00000471996 VAMP1P23763 118 aa12.57□□□□□ -0.4
SORT1-203ENST00000471996 TIRAPP58753 221 aa12.57□□□□□ -0.4
SORT1-203ENST00000471996 POLR2GP62487 172 aaKnown RBP eCLIP12.57□□□□□ -0.4
SORT1-203ENST00000471996 ZNF546Q86UE3 836 aa12.57□□□□□ -0.4
SORT1-203ENST00000471996 BLNKQ8WV28 456 aa12.57□□□□□ -0.4
SORT1-203ENST00000471996 MRPL53Q96EL3 112 aaKnown RBP12.57□□□□□ -0.4
SORT1-203ENST00000471996 AGPAT4-IT1Q9H0P7 198 aa12.57□□□□□ -0.4
SORT1-203ENST00000471996 C9JCJ5 164 aa12.56□□□□□ -0.4
SORT1-203ENST00000471996 M0R3E3 92 aa12.56□□□□□ -0.4
SORT1-203ENST00000471996 HOXB5P09067 269 aa12.56□□□□□ -0.4
SORT1-203ENST00000471996 ID3Q02535 119 aa12.56□□□□□ -0.4
SORT1-203ENST00000471996 OR10G4Q8NGN3 311 aa12.56□□□□□ -0.4
SORT1-203ENST00000471996 NDUFA13Q9P0J0 144 aa12.56□□□□□ -0.4
SORT1-203ENST00000471996 NAP1L6A6NFF2 107 aa12.55□□□□□ -0.4
SORT1-203ENST00000471996 AGPAT2O15120 278 aa12.55□□□□□ -0.4
SORT1-203ENST00000471996 ZNF253O75346 499 aa12.55□□□□□ -0.4
SORT1-203ENST00000471996 NMBP08949 121 aa12.55□□□□□ -0.4
SORT1-203ENST00000471996 C10orf113Q5VZT2 155 aa12.55□□□□□ -0.4
SORT1-203ENST00000471996 Q6ZQT7 251 aa12.55□□□□□ -0.4
SORT1-203ENST00000471996 SH2D6Q7Z4S9 175 aa12.55□□□□□ -0.4
SORT1-203ENST00000471996 OR10P1Q8NGE3 313 aa12.55□□□□□ -0.4
SORT1-203ENST00000471996 CHAC1Q9BUX1 264 aa12.55□□□□□ -0.4
SORT1-203ENST00000471996 MGAT4CQ9UBM8 478 aa12.55□□□□□ -0.4
SORT1-203ENST00000471996 LRP2P98164 4655 aa12.54□□□□□ -0.4
SORT1-203ENST00000471996 METTL15P1P0C7V9 234 aa12.54□□□□□ -0.4
SORT1-203ENST00000471996 UBE2MP61081 183 aaKnown RBP12.54□□□□□ -0.4
SORT1-203ENST00000471996 TDRG1Q3Y452 100 aa12.54□□□□□ -0.4
SORT1-203ENST00000471996 PRR9Q5T870 116 aa12.54□□□□□ -0.4
SORT1-203ENST00000471996 TMEM14EPQ6UXP3 125 aa12.54□□□□□ -0.4
SORT1-203ENST00000471996 ZFAND2AQ8N6M9 145 aa12.54□□□□□ -0.4
SORT1-203ENST00000471996 TM2D2Q9BX73 214 aa12.54□□□□□ -0.4
SORT1-203ENST00000471996 SRRQ9GZT4 340 aa12.54□□□□□ -0.4
SORT1-203ENST00000471996 SLC25A31Q9H0C2 315 aa12.54□□□□□ -0.4
SORT1-203ENST00000471996 LOC100131303A0A0U1RQF7 123 aa12.53□□□□□ -0.4
SORT1-203ENST00000471996 INPP1P49441 399 aa12.53□□□□□ -0.4
SORT1-203ENST00000471996 LINC01620Q4KN68 170 aa12.53□□□□□ -0.4
SORT1-203ENST00000471996 RASL10AQ92737 203 aa12.53□□□□□ -0.4
SORT1-203ENST00000471996 SMIM8Q96KF7 97 aa12.53□□□□□ -0.4
SORT1-203ENST00000471996 BOLA1Q9Y3E2 137 aa12.53□□□□□ -0.4
SORT1-203ENST00000471996 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.52□□□□□ -0.41
SORT1-203ENST00000471996 RS1O15537 224 aa12.52□□□□□ -0.41
SORT1-203ENST00000471996 SSSCA1O60232 199 aa12.52□□□□□ -0.41
SORT1-203ENST00000471996 SFT2D2O95562 160 aa12.52□□□□□ -0.41
SORT1-203ENST00000471996 PPT1P50897 306 aa12.52□□□□□ -0.41
SORT1-203ENST00000471996 ASAH1Q13510 395 aa12.52□□□□□ -0.41
SORT1-203ENST00000471996 TRIQKQ629K1 86 aa12.52□□□□□ -0.41
SORT1-203ENST00000471996 CIRBP-AS1Q8TBR5 109 aa12.52□□□□□ -0.41
SORT1-203ENST00000471996 DNAJC4Q9NNZ3 241 aa12.52□□□□□ -0.41
SORT1-203ENST00000471996 TRAV8-6A0A0B4J262 113 aa12.51□□□□□ -0.41
SORT1-203ENST00000471996 IGHV3-30P01768 117 aa12.51□□□□□ -0.41
SORT1-203ENST00000471996 IGHV3-33P01772 117 aa12.51□□□□□ -0.41
SORT1-203ENST00000471996 IGHV3-30-3P0DP02 117 aa12.51□□□□□ -0.41
SORT1-203ENST00000471996 IGHV3-30-5P0DP03 117 aa12.51□□□□□ -0.41
SORT1-203ENST00000471996 LAGE3Q14657 143 aa12.51□□□□□ -0.41
SORT1-203ENST00000471996 CNPY1Q3B7I2 92 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms