RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 OR51M1Q9H341 326 aa13.21□□□□□ -0.29
COMMD1-207ENST00000471704 WFDC1Q9HC57 220 aa13.21□□□□□ -0.29
COMMD1-207ENST00000471704 FUT9Q9Y231 359 aa13.21□□□□□ -0.29
COMMD1-207ENST00000471704 PRELID1Q9Y255 219 aa13.21□□□□□ -0.29
COMMD1-207ENST00000471704 TIMM8BQ9Y5J9 83 aaPredicted RBP13.21□□□□□ -0.29
COMMD1-207ENST00000471704 IGKV2-40A0A087WW87 121 aaPredicted RBP13.2□□□□□ -0.3
COMMD1-207ENST00000471704 IGKV2D-40P01614 121 aaPredicted RBP13.2□□□□□ -0.3
COMMD1-207ENST00000471704 OR10J4P0C629 311 aa13.2□□□□□ -0.3
COMMD1-207ENST00000471704 NBEAP1P0C6P0 100 aa13.2□□□□□ -0.3
COMMD1-207ENST00000471704 LINC00612Q8N6U2 182 aa13.2□□□□□ -0.3
COMMD1-207ENST00000471704 KCNIP2Q9NS61 270 aa13.2□□□□□ -0.3
COMMD1-207ENST00000471704 MUC4Q99102 2169 aa13.2□□□□□ -0.3
COMMD1-207ENST00000471704 CBY3A6NI87 242 aa13.19□□□□□ -0.3
COMMD1-207ENST00000471704 KLLNB2CW77 178 aa13.19□□□□□ -0.3
COMMD1-207ENST00000471704 C17orf112F2Z3M2 114 aa13.19□□□□□ -0.3
COMMD1-207ENST00000471704 PET100P0DJ07 73 aa13.19□□□□□ -0.3
COMMD1-207ENST00000471704 CD300CQ08708 224 aa13.19□□□□□ -0.3
COMMD1-207ENST00000471704 BTN1A1Q13410 526 aa13.19□□□□□ -0.3
COMMD1-207ENST00000471704 FAM122CQ6P4D5 195 aa13.19□□□□□ -0.3
COMMD1-207ENST00000471704 C9orf47Q6ZRZ4 202 aa13.19□□□□□ -0.3
COMMD1-207ENST00000471704 C15orf53Q8NAA6 179 aa13.19□□□□□ -0.3
COMMD1-207ENST00000471704 PAXXQ9BUH6 204 aa13.19□□□□□ -0.3
COMMD1-207ENST00000471704 F5H768 121 aa13.18□□□□□ -0.3
COMMD1-207ENST00000471704 ZNF324O75467 553 aaPredicted RBP13.18□□□□□ -0.3
COMMD1-207ENST00000471704 EIF3GO75821 320 aaKnown RBP eCLIP13.18□□□□□ -0.3
COMMD1-207ENST00000471704 ATP5G1P05496 136 aa13.18□□□□□ -0.3
COMMD1-207ENST00000471704 ATP5G3P48201 142 aa13.18□□□□□ -0.3
COMMD1-207ENST00000471704 FAM3BP58499 235 aaPredicted RBP13.18□□□□□ -0.3
COMMD1-207ENST00000471704 FFAR4Q5NUL3 377 aa13.18□□□□□ -0.3
COMMD1-207ENST00000471704 PRR9Q5T870 116 aa13.18□□□□□ -0.3
COMMD1-207ENST00000471704 RNF141Q8WVD5 230 aa13.18□□□□□ -0.3
COMMD1-207ENST00000471704 VGLL1Q99990 258 aa13.18□□□□□ -0.3
COMMD1-207ENST00000471704 AAMDCQ9H7C9 122 aa13.18□□□□□ -0.3
COMMD1-207ENST00000471704 C7orf71A4D174 169 aa13.17□□□□□ -0.3
COMMD1-207ENST00000471704 SLC25A5P05141 298 aaKnown RBP13.17□□□□□ -0.3
COMMD1-207ENST00000471704 MED14OSP0DP75 135 aa13.17□□□□□ -0.3
COMMD1-207ENST00000471704 Q6ZQT7 251 aa13.17□□□□□ -0.3
COMMD1-207ENST00000471704 LINC00477Q96M19 166 aa13.17□□□□□ -0.3
COMMD1-207ENST00000471704 CRISP2P16562 243 aa13.16□□□□□ -0.3
COMMD1-207ENST00000471704 ZFAND2AQ8N6M9 145 aa13.16□□□□□ -0.3
COMMD1-207ENST00000471704 PYGO2Q9BRQ0 406 aa13.16□□□□□ -0.3
COMMD1-207ENST00000471704 OR7C2O60412 319 aa13.15□□□□□ -0.3
COMMD1-207ENST00000471704 PTTG1O95997 202 aa13.15□□□□□ -0.3
COMMD1-207ENST00000471704 CCDC28AQ8IWP9 274 aa13.15□□□□□ -0.3
COMMD1-207ENST00000471704 C11orf72Q8NBR9 251 aa13.15□□□□□ -0.3
COMMD1-207ENST00000471704 GAGE12BA1L429 117 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 GAGE7O76087 117 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 IFNA5P01569 189 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 GAGE12FP0CL80 117 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 GAGE12GP0CL81 117 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 GAGE12IP0CL82 117 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 HOXA5P20719 270 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 SOHLH1Q5JUK2 328 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 C1orf134Q5TEV5 83 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 Q8TAT8 98 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 SCGB1C1Q8TD33 95 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 LINC00467Q9BRT7 94 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 ZNF492Q9P255 531 aa13.14□□□□□ -0.31
COMMD1-207ENST00000471704 SNURFLB1AK76 121 aa13.13□□□□□ -0.31
COMMD1-207ENST00000471704 RNASE4P34096 147 aaKnown RBP13.13□□□□□ -0.31
COMMD1-207ENST00000471704 RANP62826 216 aaKnown RBP13.13□□□□□ -0.31
COMMD1-207ENST00000471704 UBE2L3P68036 154 aaKnown RBP13.13□□□□□ -0.31
COMMD1-207ENST00000471704 DAZ2Q13117 558 aaKnown RBP13.13□□□□□ -0.31
COMMD1-207ENST00000471704 Q6ZTI0 123 aa13.13□□□□□ -0.31
COMMD1-207ENST00000471704 Q9H3A6 140 aa13.13□□□□□ -0.31
COMMD1-207ENST00000471704 NUDT3O95989 172 aa13.12□□□□□ -0.31
COMMD1-207ENST00000471704 KHDC3LQ587J8 217 aa13.12□□□□□ -0.31
COMMD1-207ENST00000471704 Q5BKY6 102 aa13.12□□□□□ -0.31
COMMD1-207ENST00000471704 TMEM78Q5T7P6 136 aa13.12□□□□□ -0.31
COMMD1-207ENST00000471704 GSN-AS1Q9NRJ2 163 aa13.12□□□□□ -0.31
COMMD1-207ENST00000471704 TP53TG3Q9ULZ0 132 aa13.12□□□□□ -0.31
COMMD1-207ENST00000471704 RYR1P21817 5038 aa13.12□□□□□ -0.31
COMMD1-207ENST00000471704 GPX1P07203 203 aa13.11□□□□□ -0.31
COMMD1-207ENST00000471704 NMBP08949 121 aa13.11□□□□□ -0.31
COMMD1-207ENST00000471704 RAB2AP61019 212 aa13.11□□□□□ -0.31
COMMD1-207ENST00000471704 ANXA2RQ3ZCQ2 193 aa13.11□□□□□ -0.31
COMMD1-207ENST00000471704 LYPD1Q8N2G4 141 aa13.11□□□□□ -0.31
COMMD1-207ENST00000471704 EIF4E3Q8N5X7 224 aaKnown RBP13.11□□□□□ -0.31
COMMD1-207ENST00000471704 ZNRF2Q8NHG8 242 aa13.11□□□□□ -0.31
COMMD1-207ENST00000471704 ATG101Q9BSB4 218 aa13.11□□□□□ -0.31
COMMD1-207ENST00000471704 TMPRSS5Q9H3S3 457 aa13.11□□□□□ -0.31
COMMD1-207ENST00000471704 M6PRP20645 277 aa13.1□□□□□ -0.31
COMMD1-207ENST00000471704 ZNF138P52744 262 aa13.1□□□□□ -0.31
COMMD1-207ENST00000471704 KLF12Q9Y4X4 402 aa13.1□□□□□ -0.31
COMMD1-207ENST00000471704 TRAV26-1A0A087WT03 109 aa13.09□□□□□ -0.31
COMMD1-207ENST00000471704 RBAKDNA6NC62 111 aa13.09□□□□□ -0.31
COMMD1-207ENST00000471704 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
COMMD1-207ENST00000471704 TAS2R45P59539 299 aa13.09□□□□□ -0.31
COMMD1-207ENST00000471704 ZNF680Q8NEM1 530 aa13.09□□□□□ -0.31
COMMD1-207ENST00000471704 MED28Q9H204 178 aa13.09□□□□□ -0.31
COMMD1-207ENST00000471704 LINC00588Q9Y4M8 146 aa13.09□□□□□ -0.31
COMMD1-207ENST00000471704 A0A0J9YY99 117 aa13.08□□□□□ -0.32
COMMD1-207ENST00000471704 NBDYA0A0U1RRE5 68 aa13.08□□□□□ -0.32
COMMD1-207ENST00000471704 OR5I1Q13606 314 aa13.08□□□□□ -0.32
COMMD1-207ENST00000471704 ACOT6Q3I5F7 207 aaPredicted RBP13.08□□□□□ -0.32
COMMD1-207ENST00000471704 AQP10Q96PS8 301 aa13.08□□□□□ -0.32
COMMD1-207ENST00000471704 TRBV7-9A0A0J9YWB2 115 aa13.07□□□□□ -0.32
COMMD1-207ENST00000471704 HMGB3O15347 200 aaKnown RBP13.07□□□□□ -0.32
COMMD1-207ENST00000471704 SPINK4O60575 86 aa13.07□□□□□ -0.32
COMMD1-207ENST00000471704 CCL18P55774 89 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms