RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 OR8B3Q8NGG8 313 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 AQP3Q92482 292 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 LSM10Q969L4 123 aaKnown RBP2.34□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF799Q96GE5 643 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 CAMK2N2Q96S95 79 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 FGFBP2Q9BYJ0 223 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 FGF23Q9GZV9 251 aaPredicted RBP2.34□□□□□ -2.03
SCN3A-207ENST00000471697 CST11Q9H112 138 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 TNFRSF19Q9NS68 423 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF581Q9P0T4 197 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 MOB4Q9Y3A3 225 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 MROH2BQ7Z745 1585 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 DSPPQ9NZW4 1301 aa2.34□□□□□ -2.04
SCN3A-207ENST00000471697 CLTCQ00610 1675 aaKnown RBP2.34□□□□□ -2.04
SCN3A-207ENST00000471697 TRPM6Q9BX84 2022 aa2.34□□□□□ -2.04
SCN3A-207ENST00000471697 PCNX3Q9H6A9 2034 aa2.34□□□□□ -2.04
SCN3A-207ENST00000471697 MRC1P22897 1456 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 AGLP35573 1532 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 ARHGAP21Q5T5U3 1957 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 USP32Q8NFA0 1604 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 IGKV1D-43A0A0B4J1Z2 117 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV1OR15-9A0A0B4J2B8 117 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 PIGBOS1A0A0B4J2F0 54 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 A0A0J9YW62 118 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 A0A1B0GW54 56 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 KRTAP16-1A8MUX0 517 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 OOSP1A8MZH6 123 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 FAM72CH0Y354 149 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 BMPR1BO00238 502 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 BCE1O60756 84 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 IGKV1-5P01602 117 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV3-11P01762 117 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV3-7P01780 117 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 IGKCP01834 107 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 CD3DP04234 171 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 CD7P09564 240 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 COX8AP10176 69 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 INSL3P51460 131 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF876PQ49A33 203 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 FAM72AQ5TYM5 149 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 FAM72DQ6L9T8 149 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 LCA10Q71F78 164 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 SPATA12Q7Z6I5 190 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 FAM72BQ86X60 149 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 GPHB5Q86YW7 130 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 SBSPONQ8IVN8 264 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 CEND1Q8N111 149 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 ORMDL3Q8N138 153 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 Q8N7P7 452 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 Q8N976 141 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 OR5C1Q8NGR4 320 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 SMIM4Q8WVI0 70 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 TMEM158Q8WZ71 300 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 NMES1Q9C002 83 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 DPH3P1Q9H4G8 78 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 C16orf95Q9H693 158 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 SDF2L1Q9HCN8 221 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 SCRT2Q9NQ03 307 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 MANBALQ9NQG1 85 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 ABRACLQ9P1F3 81 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 TP73-AS1Q9UF72 201 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 PRO0461Q9UI25 63 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 TRAPPC1Q9Y5R8 145 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 DOCK9Q9BZ29 2069 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 KIDINS220Q9ULH0 1771 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 NUP98P52948 1817 aa2.33□□□□□ -2.04
SCN3A-207ENST00000471697 PTPRDP23468 1912 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 CPS1P31327 1500 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 DLC1Q96QB1 1528 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 AGRNO00468 2067 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 KIF21BO75037 1637 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 GTF3C1Q12789 2109 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV3OR15-7A0A075B7D8 119 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 TRAV14DV4A0A0A6YYC5 116 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 TRAV1-1A0A0B4J248 108 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV3-66A0A0C4DH42 116 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 IGKV1-12A0A0C4DH73 117 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 UBE2L5PA0A1B0GUS4 154 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 RBAKDNA6NC62 111 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 C9JCJ5 164 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 M0R378 163 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 OR1I1O60431 355 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF324O75467 553 aaPredicted RBP2.32□□□□□ -2.04
SCN3A-207ENST00000471697 IGKV1D-12P01611 117 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 IGLV1-44P01699 117 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV3-13P01766 116 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 HLA-DQA1P01909 254 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 TCRAP04437 139 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 SRP19P09132 144 aaKnown RBP2.32□□□□□ -2.04
SCN3A-207ENST00000471697 ELK1P19419 428 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 SSR2P43308 183 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 CSN1S1P47710 185 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 UBE2G1P62253 170 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 GNB2P62879 340 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 UBE2L3P68036 154 aaKnown RBP2.32□□□□□ -2.04
SCN3A-207ENST00000471697 HBBP68871 147 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 BAGE3Q86Y29 109 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 BAGE2Q86Y30 109 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 PDPNQ86YL7 162 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms