RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 HIST1H1EP10412 219 aaKnown RBP10.73□□□□□ -0.69
COL1A1-203ENST00000471344 RPL12P30050 165 aaKnown RBP10.73□□□□□ -0.69
COL1A1-203ENST00000471344 LEPP41159 167 aa10.73□□□□□ -0.69
COL1A1-203ENST00000471344 BTN1A1Q13410 526 aa10.73□□□□□ -0.69
COL1A1-203ENST00000471344 LINC00612Q8N6U2 182 aa10.73□□□□□ -0.69
COL1A1-203ENST00000471344 MRPL53Q96EL3 112 aaKnown RBP10.73□□□□□ -0.69
COL1A1-203ENST00000471344 ODF3Q96PU9 254 aa10.73□□□□□ -0.69
COL1A1-203ENST00000471344 TIMM9Q9Y5J7 89 aa10.73□□□□□ -0.69
COL1A1-203ENST00000471344 GAGE12BA1L429 117 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 GAGE7O76087 117 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 GIPP09681 153 aaPredicted RBP10.72□□□□□ -0.69
COL1A1-203ENST00000471344 GAGE12FP0CL80 117 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 GAGE12GP0CL81 117 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 GAGE12IP0CL82 117 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 HOXA5P20719 270 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 CD300CQ08708 224 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 PDE6HQ13956 83 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 ICAM4Q14773 271 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 PRR9Q5T870 116 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 Q6ZQT7 251 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 FAM19A4Q96LR4 140 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 ATG101Q9BSB4 218 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 AGPAT4-IT1Q9H0P7 198 aa10.72□□□□□ -0.69
COL1A1-203ENST00000471344 SMLR1H3BR10 107 aa10.71□□□□□ -0.69
COL1A1-203ENST00000471344 EIF3GO75821 320 aaKnown RBP eCLIP10.71□□□□□ -0.69
COL1A1-203ENST00000471344 OR10J4P0C629 311 aa10.71□□□□□ -0.69
COL1A1-203ENST00000471344 FAM122CQ6P4D5 195 aa10.71□□□□□ -0.69
COL1A1-203ENST00000471344 CCDC28AQ8IWP9 274 aa10.71□□□□□ -0.69
COL1A1-203ENST00000471344 ZNRF2Q8NHG8 242 aa10.71□□□□□ -0.69
COL1A1-203ENST00000471344 VGLL1Q99990 258 aa10.71□□□□□ -0.69
COL1A1-203ENST00000471344 WDR61Q9GZS3 305 aaKnown RBP10.71□□□□□ -0.69
COL1A1-203ENST00000471344 KCNIP2Q9NS61 270 aa10.71□□□□□ -0.69
COL1A1-203ENST00000471344 PRELID1Q9Y255 219 aa10.71□□□□□ -0.69
COL1A1-203ENST00000471344 LINC00588Q9Y4M8 146 aa10.71□□□□□ -0.69
COL1A1-203ENST00000471344 TRAV26-1A0A087WT03 109 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 A0A0J9YY99 117 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 C7orf71A4D174 169 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 KLLNB2CW77 178 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 PET100P0DJ07 73 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 OR5I1Q13606 314 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 Q6ZTI0 123 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 FXYD5Q96DB9 178 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 ZNF503Q96F45 646 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 PHYHIPLQ96FC7 376 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 ATP5SQ99766 215 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 TMPRSS5Q9H3S3 457 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 GSN-AS1Q9NRJ2 163 aa10.7□□□□□ -0.7
COL1A1-203ENST00000471344 SNURFLB1AK76 121 aa10.69□□□□□ -0.7
COL1A1-203ENST00000471344 ZNF324O75467 553 aaPredicted RBP10.69□□□□□ -0.7
COL1A1-203ENST00000471344 SLC25A5P05141 298 aaKnown RBP10.69□□□□□ -0.7
COL1A1-203ENST00000471344 RNASE4P34096 147 aaKnown RBP10.69□□□□□ -0.7
COL1A1-203ENST00000471344 C1orf134Q5TEV5 83 aa10.69□□□□□ -0.7
COL1A1-203ENST00000471344 C11orf72Q8NBR9 251 aa10.69□□□□□ -0.7
COL1A1-203ENST00000471344 Q8TAT8 98 aa10.69□□□□□ -0.7
COL1A1-203ENST00000471344 PYGO2Q9BRQ0 406 aa10.69□□□□□ -0.7
COL1A1-203ENST00000471344 RNF222A6NCQ9 220 aa10.68□□□□□ -0.7
COL1A1-203ENST00000471344 NBEAP1P0C6P0 100 aa10.68□□□□□ -0.7
COL1A1-203ENST00000471344 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
COL1A1-203ENST00000471344 ZFAND2AQ8N6M9 145 aa10.68□□□□□ -0.7
COL1A1-203ENST00000471344 OR2T35Q8NGX2 323 aa10.68□□□□□ -0.7
COL1A1-203ENST00000471344 LINC00477Q96M19 166 aa10.68□□□□□ -0.7
COL1A1-203ENST00000471344 PAXXQ9BUH6 204 aa10.68□□□□□ -0.7
COL1A1-203ENST00000471344 OR51M1Q9H341 326 aa10.68□□□□□ -0.7
COL1A1-203ENST00000471344 TP53TG3Q9ULZ0 132 aa10.68□□□□□ -0.7
COL1A1-203ENST00000471344 FUT9Q9Y231 359 aa10.68□□□□□ -0.7
COL1A1-203ENST00000471344 NBDYA0A0U1RRE5 68 aa10.67□□□□□ -0.7
COL1A1-203ENST00000471344 C17orf112F2Z3M2 114 aa10.67□□□□□ -0.7
COL1A1-203ENST00000471344 M6PRP20645 277 aa10.67□□□□□ -0.7
COL1A1-203ENST00000471344 FAM3BP58499 235 aaPredicted RBP10.67□□□□□ -0.7
COL1A1-203ENST00000471344 SSX7Q7RTT5 188 aa10.67□□□□□ -0.7
COL1A1-203ENST00000471344 ZNF575Q86XF7 245 aa10.67□□□□□ -0.7
COL1A1-203ENST00000471344 GNPNAT1Q96EK6 184 aaPredicted RBP10.67□□□□□ -0.7
COL1A1-203ENST00000471344 AQP10Q96PS8 301 aa10.67□□□□□ -0.7
COL1A1-203ENST00000471344 MRPL32Q9BYC8 188 aaKnown RBP10.67□□□□□ -0.7
COL1A1-203ENST00000471344 AAMDCQ9H7C9 122 aa10.67□□□□□ -0.7
COL1A1-203ENST00000471344 KLF12Q9Y4X4 402 aa10.67□□□□□ -0.7
COL1A1-203ENST00000471344 HSPG2P98160 4391 aa10.67□□□□□ -0.7
COL1A1-203ENST00000471344 RYR1P21817 5038 aa10.66□□□□□ -0.7
COL1A1-203ENST00000471344 FXYD6-FXYD2A0A087WZ82 144 aa10.66□□□□□ -0.7
COL1A1-203ENST00000471344 OR7C2O60412 319 aa10.66□□□□□ -0.7
COL1A1-203ENST00000471344 CRISP2P16562 243 aa10.66□□□□□ -0.7
COL1A1-203ENST00000471344 CCL18P55774 89 aa10.66□□□□□ -0.7
COL1A1-203ENST00000471344 DAZ2Q13117 558 aaKnown RBP10.66□□□□□ -0.7
COL1A1-203ENST00000471344 FFAR4Q5NUL3 377 aa10.66□□□□□ -0.7
COL1A1-203ENST00000471344 KRTAP1-5Q9BYS1 174 aa10.66□□□□□ -0.7
COL1A1-203ENST00000471344 LRP1BQ9NZR2 4599 aa10.66□□□□□ -0.7
COL1A1-203ENST00000471344 GPX1P07203 203 aa10.65□□□□□ -0.7
COL1A1-203ENST00000471344 TNP2Q05952 138 aa10.65□□□□□ -0.7
COL1A1-203ENST00000471344 TMEM78Q5T7P6 136 aa10.65□□□□□ -0.7
COL1A1-203ENST00000471344 EIF4E3Q8N5X7 224 aaKnown RBP10.65□□□□□ -0.7
COL1A1-203ENST00000471344 RXFP4Q8TDU9 374 aa10.65□□□□□ -0.7
COL1A1-203ENST00000471344 TNFSF18Q9UNG2 199 aa10.65□□□□□ -0.7
COL1A1-203ENST00000471344 TRGV1A0A0A0MS02 117 aa10.64□□□□□ -0.71
COL1A1-203ENST00000471344 NMBP08949 121 aa10.64□□□□□ -0.71
COL1A1-203ENST00000471344 RANP62826 216 aaKnown RBP10.64□□□□□ -0.71
COL1A1-203ENST00000471344 UBE2L3P68036 154 aaKnown RBP10.64□□□□□ -0.71
COL1A1-203ENST00000471344 SOHLH1Q5JUK2 328 aa10.64□□□□□ -0.71
COL1A1-203ENST00000471344 ZNF680Q8NEM1 530 aa10.64□□□□□ -0.71
COL1A1-203ENST00000471344 OR11H4Q8NGC9 324 aa10.64□□□□□ -0.71
COL1A1-203ENST00000471344 VSIG2Q96IQ7 327 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms