RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 DNMBPQ6XZF7 1577 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 ANAPC1Q9H1A4 1944 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 MYH13Q9UKX3 1938 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 CHD1O14646 1710 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 NALCNQ8IZF0 1738 aa1.32□□□□□ -2.2
BRCA2-202ENST00000470094 FN1P02751 2386 aaKnown RBP1.32□□□□□ -2.2
BRCA2-202ENST00000470094 AKAP12Q02952 1782 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 CCDC141Q6ZP82 1450 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 LMTK2Q8IWU2 1503 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 PLXNA4Q9HCM2 1894 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 MYO5AQ9Y4I1 1855 aaKnown RBP1.31□□□□□ -2.2
BRCA2-202ENST00000470094 TMEM131LA2VDJ0 1609 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 TRAV14DV4A0A0A6YYC5 116 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 TRAV13-1A0A0B4J241 112 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 TRAV3A0A0B4J244 114 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 C2orf70A6NJV1 201 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 IFITM5A6NNB3 132 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 C9JAW5 83 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 H3BQF6 201 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 M0R143 59 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 CCL25O15444 150 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 OR2H2O95918 312 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 APODP05090 189 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 KDELR1P24390 212 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 CMPK1P30085 196 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 DSCR4P56555 118 aaPredicted RBP1.31□□□□□ -2.2
BRCA2-202ENST00000470094 CKS1BP61024 79 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 HSD17B12Q53GQ0 312 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 OCIAD2Q56VL3 154 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 TEX261Q6UWH6 196 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 TCTE3Q8IZS6 198 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 C8orf59Q8N0T1 100 aaPredicted RBP1.31□□□□□ -2.2
BRCA2-202ENST00000470094 LINC00311Q8N616 119 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 MORN4Q8NDC4 146 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 OR5A2Q8NGI9 324 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 ZNF563Q8TA94 476 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 LCN9Q8WX39 176 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 ZC2HC1AQ96GY0 325 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 ZNF714Q96N38 554 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 NAA38Q9BRA0 125 aaKnown RBP1.31□□□□□ -2.2
BRCA2-202ENST00000470094 SCN3BQ9NY72 215 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 OR5AC2Q9NZP5 309 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 COPZ2Q9P299 210 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 HIGD1AQ9Y241 93 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 KIAA1551Q9HCM1 1747 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 DOCK10Q96BY6 2186 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 TNS3Q68CZ2 1445 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 ABCC10Q5T3U5 1492 aa1.31□□□□□ -2.2
BRCA2-202ENST00000470094 MAP3K1Q13233 1512 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 DLC1Q96QB1 1528 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 USP54Q70EL1 1684 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 COL24A1Q17RW2 1714 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 TRAV30A0A087WSZ9 112 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 A0A1B0GW64 132 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 C20orf202A1L168 122 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 B4DSR2 109 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 E7EUB6 86 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 MRPS14O60783 128 aaKnown RBP1.3□□□□□ -2.2
BRCA2-202ENST00000470094 EVI2AP22794 236 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 ETV6P41212 452 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 RAB5CP51148 216 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 CLLU1Q5K131 121 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 FAM216BQ8N7L0 139 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 Q8N814 137 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 OR4B1Q8NGF8 309 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 POP5Q969H6 163 aaKnown RBP1.3□□□□□ -2.2
BRCA2-202ENST00000470094 PRELID3AQ96N28 172 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 REG4Q9BYZ8 158 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 LINC00470Q9BZP3 86 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 HSPB8Q9UJY1 196 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 ERG28Q9UKR5 140 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 GBF1Q92538 1859 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 KDM6AO15550 1401 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-202ENST00000470094 CASKIN1Q8WXD9 1431 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 MICAL3Q7RTP6 2002 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 FANCMQ8IYD8 2048 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 ADGRL2O95490 1459 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 POLA1P09884 1462 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-202ENST00000470094 FANCD2Q9BXW9 1451 aa1.3□□□□□ -2.2
BRCA2-202ENST00000470094 PRRC2BQ5JSZ5 2229 aaKnown RBP1.3□□□□□ -2.2
BRCA2-202ENST00000470094 KIF21AQ7Z4S6 1674 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 ATG2AQ2TAZ0 1938 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 IGKV2D-26A0A0A0MRZ7 120 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 F6UZH7 168 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 H3BMG7 143 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 LYRM1O43325 122 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 PAEPP09466 180 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 BTG2P78543 158 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 MRPS36P82909 103 aaKnown RBP1.29□□□□□ -2.2
BRCA2-202ENST00000470094 QRFPP83859 136 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 DEFB113Q30KQ7 82 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 Q5BKY6 102 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 KRTAP26-1Q6PEX3 210 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 TMEM14EPQ6UXP3 125 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 C4orf33Q8N1A6 199 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 Q8N2B8 174 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 PLPP5Q8NEB5 264 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 OR4S1Q8NGB4 309 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 OR51A4Q8NGJ6 313 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 CHCHD1Q96BP2 118 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms