RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 C18orf15Q96N68 181 aa12.12□□□□□ -0.47
COL7A1-208ENST00000470076 LINC00467Q9BRT7 94 aa12.12□□□□□ -0.47
COL7A1-208ENST00000470076 Q9H3A6 140 aa12.12□□□□□ -0.47
COL7A1-208ENST00000470076 TMPRSS5Q9H3S3 457 aa12.12□□□□□ -0.47
COL7A1-208ENST00000470076 A0A1W2PPQ1 181 aa12.11□□□□□ -0.47
COL7A1-208ENST00000470076 KLLNB2CW77 178 aa12.11□□□□□ -0.47
COL7A1-208ENST00000470076 NDUFB4O95168 129 aa12.11□□□□□ -0.47
COL7A1-208ENST00000470076 ERCC8Q13216 396 aa12.11□□□□□ -0.47
COL7A1-208ENST00000470076 ESRGQ1W209 222 aa12.11□□□□□ -0.47
COL7A1-208ENST00000470076 FAM19A4Q96LR4 140 aa12.11□□□□□ -0.47
COL7A1-208ENST00000470076 AAMDCQ9H7C9 122 aa12.11□□□□□ -0.47
COL7A1-208ENST00000470076 GPN1Q9HCN4 374 aaPredicted RBP12.11□□□□□ -0.47
COL7A1-208ENST00000470076 MRPS16Q9Y3D3 137 aaKnown RBP12.11□□□□□ -0.47
COL7A1-208ENST00000470076 TRGV2A0A075B6R0 118 aa12.1□□□□□ -0.47
COL7A1-208ENST00000470076 FAM240BA0A1B0GVZ2 78 aa12.1□□□□□ -0.47
COL7A1-208ENST00000470076 ZNF324O75467 553 aaPredicted RBP12.1□□□□□ -0.47
COL7A1-208ENST00000470076 PYYP10082 97 aa12.1□□□□□ -0.47
COL7A1-208ENST00000470076 ANXA2RQ3ZCQ2 193 aa12.1□□□□□ -0.47
COL7A1-208ENST00000470076 EIF4E3Q8N5X7 224 aaKnown RBP12.1□□□□□ -0.47
COL7A1-208ENST00000470076 C11orf72Q8NBR9 251 aa12.1□□□□□ -0.47
COL7A1-208ENST00000470076 NPCDR1Q9BY65 106 aa12.1□□□□□ -0.47
COL7A1-208ENST00000470076 KRTAP1-5Q9BYS1 174 aa12.1□□□□□ -0.47
COL7A1-208ENST00000470076 AGPAT4-IT1Q9H0P7 198 aa12.1□□□□□ -0.47
COL7A1-208ENST00000470076 GSN-AS1Q9NRJ2 163 aa12.1□□□□□ -0.47
COL7A1-208ENST00000470076 NMBP08949 121 aa12.09□□□□□ -0.47
COL7A1-208ENST00000470076 BTF3P20290 206 aaKnown RBP12.09□□□□□ -0.47
COL7A1-208ENST00000470076 C9orf47Q6ZRZ4 202 aa12.09□□□□□ -0.47
COL7A1-208ENST00000470076 BLNKQ8WV28 456 aa12.09□□□□□ -0.47
COL7A1-208ENST00000470076 KRTAP4-5Q9BYR2 181 aa12.09□□□□□ -0.47
COL7A1-208ENST00000470076 GPX1P07203 203 aa12.08□□□□□ -0.48
COL7A1-208ENST00000470076 CRISP2P16562 243 aa12.08□□□□□ -0.48
COL7A1-208ENST00000470076 RNASE4P34096 147 aaKnown RBP12.08□□□□□ -0.48
COL7A1-208ENST00000470076 CD300CQ08708 224 aa12.08□□□□□ -0.48
COL7A1-208ENST00000470076 BTN1A1Q13410 526 aa12.08□□□□□ -0.48
COL7A1-208ENST00000470076 GCSAMLQ5JQS6 135 aa12.08□□□□□ -0.48
COL7A1-208ENST00000470076 MZT2BQ6NZ67 158 aa12.08□□□□□ -0.48
COL7A1-208ENST00000470076 EXOC3-AS1Q8N2X6 119 aa12.08□□□□□ -0.48
COL7A1-208ENST00000470076 VSIG2Q96IQ7 327 aa12.08□□□□□ -0.48
COL7A1-208ENST00000470076 FUT9Q9Y231 359 aa12.08□□□□□ -0.48
COL7A1-208ENST00000470076 A0A096LPF7 62 aa12.07□□□□□ -0.48
COL7A1-208ENST00000470076 TRGV1A0A0A0MS02 117 aa12.07□□□□□ -0.48
COL7A1-208ENST00000470076 ICAM4Q14773 271 aa12.07□□□□□ -0.48
COL7A1-208ENST00000470076 IBA57Q5T440 356 aaKnown RBP12.07□□□□□ -0.48
COL7A1-208ENST00000470076 TMEM78Q5T7P6 136 aa12.07□□□□□ -0.48
COL7A1-208ENST00000470076 SPATA12Q7Z6I5 190 aa12.07□□□□□ -0.48
COL7A1-208ENST00000470076 SLC25A2Q9BXI2 301 aa12.07□□□□□ -0.48
COL7A1-208ENST00000470076 SPINK4O60575 86 aa12.06□□□□□ -0.48
COL7A1-208ENST00000470076 NBEAP1P0C6P0 100 aa12.06□□□□□ -0.48
COL7A1-208ENST00000470076 TCL1AP56279 114 aa12.06□□□□□ -0.48
COL7A1-208ENST00000470076 NHLH2Q02577 135 aa12.06□□□□□ -0.48
COL7A1-208ENST00000470076 LINC00299Q6ZSB3 139 aa12.06□□□□□ -0.48
COL7A1-208ENST00000470076 OR5C1Q8NGR4 320 aa12.06□□□□□ -0.48
COL7A1-208ENST00000470076 FAM167A-AS1Q96KT0 104 aa12.06□□□□□ -0.48
COL7A1-208ENST00000470076 SLC25A31Q9H0C2 315 aa12.06□□□□□ -0.48
COL7A1-208ENST00000470076 IGKV2-40A0A087WW87 121 aaPredicted RBP12.05□□□□□ -0.48
COL7A1-208ENST00000470076 RGS13O14921 159 aa12.05□□□□□ -0.48
COL7A1-208ENST00000470076 IGKV2D-40P01614 121 aaPredicted RBP12.05□□□□□ -0.48
COL7A1-208ENST00000470076 FAM122CQ6P4D5 195 aa12.05□□□□□ -0.48
COL7A1-208ENST00000470076 MIR17HGQ75NE6 70 aa12.05□□□□□ -0.48
COL7A1-208ENST00000470076 ZFAND2AQ8N6M9 145 aa12.05□□□□□ -0.48
COL7A1-208ENST00000470076 MAPKAPK5-AS1Q8N8E1 139 aa12.05□□□□□ -0.48
COL7A1-208ENST00000470076 THAP6Q8TBB0 222 aa12.05□□□□□ -0.48
COL7A1-208ENST00000470076 OR51M1Q9H341 326 aa12.05□□□□□ -0.48
COL7A1-208ENST00000470076 KCNIP2Q9NS61 270 aa12.05□□□□□ -0.48
COL7A1-208ENST00000470076 KLF12Q9Y4X4 402 aa12.05□□□□□ -0.48
COL7A1-208ENST00000470076 E5RGE8 158 aa12.04□□□□□ -0.48
COL7A1-208ENST00000470076 ASAH1Q13510 395 aa12.04□□□□□ -0.48
COL7A1-208ENST00000470076 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
COL7A1-208ENST00000470076 VGLL1Q99990 258 aa12.04□□□□□ -0.48
COL7A1-208ENST00000470076 MRPL32Q9BYC8 188 aaKnown RBP12.04□□□□□ -0.48
COL7A1-208ENST00000470076 ZNF492Q9P255 531 aa12.04□□□□□ -0.48
COL7A1-208ENST00000470076 DNAH5Q8TE73 4624 aa12.03□□□□□ -0.48
COL7A1-208ENST00000470076 IGHV1OR15-1A0A075B7D0 117 aa12.03□□□□□ -0.48
COL7A1-208ENST00000470076 TRBV7-9A0A0J9YWB2 115 aa12.03□□□□□ -0.48
COL7A1-208ENST00000470076 NMES1Q9C002 83 aa12.03□□□□□ -0.48
COL7A1-208ENST00000470076 APOBP04114 4563 aaKnown RBP12.03□□□□□ -0.48
COL7A1-208ENST00000470076 PAX4O43316 350 aa12.02□□□□□ -0.49
COL7A1-208ENST00000470076 ZNF138P52744 262 aa12.02□□□□□ -0.49
COL7A1-208ENST00000470076 SLAQ13239 276 aa12.02□□□□□ -0.49
COL7A1-208ENST00000470076 PRR9Q5T870 116 aa12.02□□□□□ -0.49
COL7A1-208ENST00000470076 S100ZQ8WXG8 99 aa12.02□□□□□ -0.49
COL7A1-208ENST00000470076 FXYD5Q96DB9 178 aa12.02□□□□□ -0.49
COL7A1-208ENST00000470076 ARPC5LQ9BPX5 153 aa12.02□□□□□ -0.49
COL7A1-208ENST00000470076 PAXXQ9BUH6 204 aa12.02□□□□□ -0.49
COL7A1-208ENST00000470076 WDR61Q9GZS3 305 aaKnown RBP12.02□□□□□ -0.49
COL7A1-208ENST00000470076 TP53TG3Q9ULZ0 132 aa12.02□□□□□ -0.49
COL7A1-208ENST00000470076 ICOSQ9Y6W8 199 aa12.02□□□□□ -0.49
COL7A1-208ENST00000470076 C17orf112F2Z3M2 114 aa12.01□□□□□ -0.49
COL7A1-208ENST00000470076 SIVA1O15304 175 aa12.01□□□□□ -0.49
COL7A1-208ENST00000470076 SIX6O95475 246 aa12.01□□□□□ -0.49
COL7A1-208ENST00000470076 OR10J4P0C629 311 aa12.01□□□□□ -0.49
COL7A1-208ENST00000470076 CYCSP99999 105 aaKnown RBP12.01□□□□□ -0.49
COL7A1-208ENST00000470076 ENKURQ8TC29 256 aa12.01□□□□□ -0.49
COL7A1-208ENST00000470076 OR5AC2Q9NZP5 309 aa12.01□□□□□ -0.49
COL7A1-208ENST00000470076 PRO0255Q9UI72 69 aa12.01□□□□□ -0.49
COL7A1-208ENST00000470076 CSN1S1P47710 185 aa12□□□□□ -0.49
COL7A1-208ENST00000470076 LINC00315P59091 139 aa12□□□□□ -0.49
COL7A1-208ENST00000470076 KRTAP10-2P60368 255 aa12□□□□□ -0.49
COL7A1-208ENST00000470076 ZNF415Q09FC8 603 aa12□□□□□ -0.49
COL7A1-208ENST00000470076 LRRC37A5PQ49AS3 106 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms