RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TWIST1Q15672 202 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 C15orf32Q32M92 178 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 ANKRD39Q53RE8 183 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 OR8A1Q8NGG7 326 aa10.55□□□□□ -0.72
BRCA1-209ENST00000470026 BOD1L2Q8IYS8 172 aa10.54□□□□□ -0.72
BRCA1-209ENST00000470026 SLC50A1Q9BRV3 221 aa10.54□□□□□ -0.72
BRCA1-209ENST00000470026 PRAC2D3DTV9 90 aa10.54□□□□□ -0.72
BRCA1-209ENST00000470026 IFI27L1Q96BM0 104 aa10.54□□□□□ -0.72
BRCA1-209ENST00000470026 CCDC140Q96MF4 163 aa10.54□□□□□ -0.72
BRCA1-209ENST00000470026 SMKR1H3BMG3 65 aa10.53□□□□□ -0.72
BRCA1-209ENST00000470026 ATP6V0E1O15342 81 aa10.53□□□□□ -0.72
BRCA1-209ENST00000470026 SEC11AP67812 179 aa10.53□□□□□ -0.72
BRCA1-209ENST00000470026 VAMP3Q15836 100 aa10.53□□□□□ -0.72
BRCA1-209ENST00000470026 PIFOQ8TCI5 191 aa10.53□□□□□ -0.72
BRCA1-209ENST00000470026 RNASE8Q8TDE3 154 aaKnown RBP10.53□□□□□ -0.72
BRCA1-209ENST00000470026 MRPL53Q96EL3 112 aaKnown RBP10.53□□□□□ -0.72
BRCA1-209ENST00000470026 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
BRCA1-209ENST00000470026 DCHS2Q6V1P9 2916 aa10.52□□□□□ -0.72
BRCA1-209ENST00000470026 NDUFS7O75251 213 aa10.52□□□□□ -0.72
BRCA1-209ENST00000470026 CLEC3BP05452 202 aa10.52□□□□□ -0.72
BRCA1-209ENST00000470026 CACNG7P62955 275 aa10.52□□□□□ -0.72
BRCA1-209ENST00000470026 ERCC8Q13216 396 aa10.52□□□□□ -0.72
BRCA1-209ENST00000470026 SPTBN2O15020 2390 aa10.52□□□□□ -0.73
BRCA1-209ENST00000470026 SIVA1O15304 175 aa10.52□□□□□ -0.73
BRCA1-209ENST00000470026 GOSR1O95249 250 aa10.52□□□□□ -0.73
BRCA1-209ENST00000470026 ORM1P02763 201 aa10.52□□□□□ -0.73
BRCA1-209ENST00000470026 RBX1P62877 108 aa10.52□□□□□ -0.73
BRCA1-209ENST00000470026 U3KQE9 123 aa10.52□□□□□ -0.73
BRCA1-209ENST00000470026 IGHV3OR16-8A0A075B7F1 116 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 IGHV3-35A0A0C4DH35 117 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 NHLH1Q02575 133 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 TMEM97Q5BJF2 176 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 OR4C5Q8NGB2 326 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 MAP1LC3AQ9H492 121 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 TRAV8-2A0A0B4J237 113 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 IGKV3D-20A0A0C4DH25 116 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 CENPVL3A0A0U1RRI6 287 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 ECSCRQ19T08 205 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 ATP6V0BQ99437 205 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 HIF1ANQ9NWT6 349 aa10.51□□□□□ -0.73
BRCA1-209ENST00000470026 SMAD7O15105 426 aaKnown RBP10.5□□□□□ -0.73
BRCA1-209ENST00000470026 SAA4P35542 130 aa10.5□□□□□ -0.73
BRCA1-209ENST00000470026 FXYD7P58549 80 aa10.5□□□□□ -0.73
BRCA1-209ENST00000470026 IL17RELQ6ZVW7 336 aa10.5□□□□□ -0.73
BRCA1-209ENST00000470026 RNF182Q8N6D2 247 aa10.5□□□□□ -0.73
BRCA1-209ENST00000470026 OR9G4Q8NGQ1 327 aa10.5□□□□□ -0.73
BRCA1-209ENST00000470026 AGPAT4-IT1Q9H0P7 198 aa10.5□□□□□ -0.73
BRCA1-209ENST00000470026 ZMAT4Q9H898 229 aa10.5□□□□□ -0.73
BRCA1-209ENST00000470026 NXT2Q9NPJ8 142 aaKnown RBP10.5□□□□□ -0.73
BRCA1-209ENST00000470026 RAXQ9Y2V3 346 aa10.5□□□□□ -0.73
BRCA1-209ENST00000470026 PTPRZ1P23471 2315 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-209ENST00000470026 TRBV7-1A0A0A6YYK4 115 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 PRSS47A8MTI9 375 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 GAS8-AS1O95177 125 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 FCER1GP30273 86 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 EFNA4P52798 201 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 LMO4P61968 165 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 PSMG4Q5JS54 123 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 EEF1AKMT3Q96AZ1 226 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 C11orf21Q9P2W6 132 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 TACC2O95359 2948 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 HRNRQ86YZ3 2850 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-209ENST00000470026 IGLV2-18A0A075B6J9 118 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 TNFRSF6BO95407 300 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 C19orf54Q5BKX5 351 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 CLEC19AQ6UXS0 136 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 C9orf47Q6ZRZ4 202 aa10.49□□□□□ -0.73
BRCA1-209ENST00000470026 PEF1Q9UBV8 284 aaKnown RBP10.49□□□□□ -0.73
BRCA1-209ENST00000470026 IGHV4-4A0A075B6R2 117 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 CBY3A6NI87 242 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 LINC01548A6NM66 108 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 G3V318 75 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 SNAI2O43623 268 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 ADAMTSL5Q6ZMM2 481 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 C5orf56Q8N8D9 126 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 TRAV8-6A0A0B4J262 113 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 IGHV7-4-1A0A0J9YVY3 117 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 CRIP2P52943 208 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-209ENST00000470026 HSD52Q0P140 79 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 ERASQ7Z444 233 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 LRBAP50851 2863 aa10.48□□□□□ -0.73
BRCA1-209ENST00000470026 CDKN1BP46527 198 aa10.47□□□□□ -0.73
BRCA1-209ENST00000470026 Q8N8P6 123 aa10.47□□□□□ -0.73
BRCA1-209ENST00000470026 OR4X2Q8NGF9 303 aa10.47□□□□□ -0.73
BRCA1-209ENST00000470026 METTL26Q96S19 204 aa10.47□□□□□ -0.73
BRCA1-209ENST00000470026 DKK2Q9UBU2 259 aa10.47□□□□□ -0.73
BRCA1-209ENST00000470026 A1L4Q6 167 aa10.46□□□□□ -0.73
BRCA1-209ENST00000470026 C7orf71A4D174 169 aa10.46□□□□□ -0.73
BRCA1-209ENST00000470026 H3BRM9 83 aa10.46□□□□□ -0.73
BRCA1-209ENST00000470026 NPFFO15130 113 aa10.46□□□□□ -0.73
BRCA1-209ENST00000470026 ODF1Q14990 250 aa10.46□□□□□ -0.73
BRCA1-209ENST00000470026 C8orf86Q6ZUL3 223 aa10.46□□□□□ -0.73
BRCA1-209ENST00000470026 LEPP41159 167 aa10.46□□□□□ -0.74
BRCA1-209ENST00000470026 HHLA3Q9XRX5 114 aa10.46□□□□□ -0.74
BRCA1-209ENST00000470026 CEP295Q9C0D2 2601 aa10.46□□□□□ -0.74
BRCA1-209ENST00000470026 IGHV3-66A0A0C4DH42 116 aa10.45□□□□□ -0.74
BRCA1-209ENST00000470026 PPIFP30405 207 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms