RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 MGST2Q99735 147 aa8.41□□□□□ -1.06
COL5A1-207ENST00000469093 GGACTQ9BVM4 153 aa8.41□□□□□ -1.06
COL5A1-207ENST00000469093 DNAJC4Q9NNZ3 241 aa8.41□□□□□ -1.06
COL5A1-207ENST00000469093 RCL1Q9Y2P8 373 aaKnown RBP8.41□□□□□ -1.06
COL5A1-207ENST00000469093 PXMP4Q9Y6I8 212 aa8.41□□□□□ -1.06
COL5A1-207ENST00000469093 DNAH5Q8TE73 4624 aa8.4□□□□□ -1.06
COL5A1-207ENST00000469093 TRAV5A0A0B4J249 113 aa8.4□□□□□ -1.06
COL5A1-207ENST00000469093 H2BFSP57053 126 aa8.4□□□□□ -1.06
COL5A1-207ENST00000469093 RAB32Q13637 225 aa8.4□□□□□ -1.06
COL5A1-207ENST00000469093 C11orf72Q8NBR9 251 aa8.4□□□□□ -1.06
COL5A1-207ENST00000469093 THAP6Q8TBB0 222 aa8.4□□□□□ -1.06
COL5A1-207ENST00000469093 C18orf15Q96N68 181 aa8.4□□□□□ -1.06
COL5A1-207ENST00000469093 GSN-AS1Q9NRJ2 163 aa8.4□□□□□ -1.06
COL5A1-207ENST00000469093 PGPEP1Q9NXJ5 209 aa8.4□□□□□ -1.06
COL5A1-207ENST00000469093 TRGV2A0A075B6R0 118 aa8.39□□□□□ -1.07
COL5A1-207ENST00000469093 EPM2AB3EWF7 344 aa8.39□□□□□ -1.07
COL5A1-207ENST00000469093 ZNF324O75467 553 aaPredicted RBP8.39□□□□□ -1.07
COL5A1-207ENST00000469093 FUSP35637 526 aaKnown RBP eCLIP8.39□□□□□ -1.07
COL5A1-207ENST00000469093 CAV2P51636 162 aa8.39□□□□□ -1.07
COL5A1-207ENST00000469093 GUK1Q16774 197 aa8.39□□□□□ -1.07
COL5A1-207ENST00000469093 Q6ZRG5 221 aa8.39□□□□□ -1.07
COL5A1-207ENST00000469093 PPP1R1CQ8WVI7 109 aa8.39□□□□□ -1.07
COL5A1-207ENST00000469093 E5RGE8 158 aa8.38□□□□□ -1.07
COL5A1-207ENST00000469093 SIVA1O15304 175 aa8.38□□□□□ -1.07
COL5A1-207ENST00000469093 SLC25A5P05141 298 aaKnown RBP8.38□□□□□ -1.07
COL5A1-207ENST00000469093 CAMLGP49069 296 aa8.38□□□□□ -1.07
COL5A1-207ENST00000469093 XGP55808 180 aa8.38□□□□□ -1.07
COL5A1-207ENST00000469093 CD300CQ08708 224 aa8.38□□□□□ -1.07
COL5A1-207ENST00000469093 ERCC8Q13216 396 aa8.38□□□□□ -1.07
COL5A1-207ENST00000469093 MIC13Q5XKP0 118 aa8.38□□□□□ -1.07
COL5A1-207ENST00000469093 STX12Q86Y82 276 aa8.38□□□□□ -1.07
COL5A1-207ENST00000469093 SLC25A31Q9H0C2 315 aa8.38□□□□□ -1.07
COL5A1-207ENST00000469093 FUT9Q9Y231 359 aa8.38□□□□□ -1.07
COL5A1-207ENST00000469093 TNFRSF18Q9Y5U5 241 aa8.38□□□□□ -1.07
COL5A1-207ENST00000469093 TRGV1A0A0A0MS02 117 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 C7orf71A4D174 169 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 KLLNB2CW77 178 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 M0R3E3 92 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 ZNF253O75346 499 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 MPC2O95563 127 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 IL15RAQ13261 267 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 RAB31Q13636 194 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 ANXA2RQ3ZCQ2 193 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 LYPD1Q8N2G4 141 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 ZNF680Q8NEM1 530 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 OR2T35Q8NGX2 323 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 FAM19A4Q96LR4 140 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 LINC00467Q9BRT7 94 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 AGPAT4-IT1Q9H0P7 198 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 KLF12Q9Y4X4 402 aa8.37□□□□□ -1.07
COL5A1-207ENST00000469093 DMBT1Q9UGM3 2413 aaPredicted RBP8.37□□□□□ -1.07
COL5A1-207ENST00000469093 TRBV19A0A075B6N1 114 aa8.36□□□□□ -1.07
COL5A1-207ENST00000469093 SPINK4O60575 86 aa8.36□□□□□ -1.07
COL5A1-207ENST00000469093 CST7O76096 145 aa8.36□□□□□ -1.07
COL5A1-207ENST00000469093 NDUFB4O95168 129 aa8.36□□□□□ -1.07
COL5A1-207ENST00000469093 RNASE4P34096 147 aaKnown RBP8.36□□□□□ -1.07
COL5A1-207ENST00000469093 HBG1P69891 147 aa8.36□□□□□ -1.07
COL5A1-207ENST00000469093 HBG2P69892 147 aa8.36□□□□□ -1.07
COL5A1-207ENST00000469093 AKAP14Q86UN6 197 aa8.36□□□□□ -1.07
COL5A1-207ENST00000469093 EIF4E3Q8N5X7 224 aaKnown RBP8.36□□□□□ -1.07
COL5A1-207ENST00000469093 OR1L4Q8NGR5 311 aa8.36□□□□□ -1.07
COL5A1-207ENST00000469093 MRPL53Q96EL3 112 aaKnown RBP8.36□□□□□ -1.07
COL5A1-207ENST00000469093 LINC00477Q96M19 166 aa8.36□□□□□ -1.07
COL5A1-207ENST00000469093 LYRM2Q9NU23 88 aaPredicted RBP8.36□□□□□ -1.07
COL5A1-207ENST00000469093 MBD2Q9UBB5 411 aa8.36□□□□□ -1.07
COL5A1-207ENST00000469093 WDR83OSQ9Y284 106 aa8.36□□□□□ -1.07
COL5A1-207ENST00000469093 PAX4O43316 350 aa8.35□□□□□ -1.07
COL5A1-207ENST00000469093 NXPH4O95158 308 aa8.35□□□□□ -1.07
COL5A1-207ENST00000469093 INAFM2P0DMQ5 153 aa8.35□□□□□ -1.07
COL5A1-207ENST00000469093 RPL29P47914 159 aaKnown RBP8.35□□□□□ -1.07
COL5A1-207ENST00000469093 TCL1AP56279 114 aa8.35□□□□□ -1.07
COL5A1-207ENST00000469093 BTN1A1Q13410 526 aa8.35□□□□□ -1.07
COL5A1-207ENST00000469093 LYPD5Q6UWN5 251 aa8.35□□□□□ -1.07
COL5A1-207ENST00000469093 C11orf1Q9H5F2 150 aa8.35□□□□□ -1.07
COL5A1-207ENST00000469093 ICOSQ9Y6W8 199 aa8.35□□□□□ -1.07
COL5A1-207ENST00000469093 FXYD6-FXYD2A0A087WZ82 144 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 FAM24AA6NFZ4 105 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 EREGO14944 169 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 MPDU1O75352 247 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 SULT1A1P50225 295 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 ERVFC1-1P60608 527 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 BAXQ07812 192 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 VWC2Q2TAL6 325 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 CDPF1Q6NVV7 123 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 Q6ZQT7 251 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 INO80EQ8NBZ0 244 aaPredicted RBP8.34□□□□□ -1.07
COL5A1-207ENST00000469093 CHAC2Q8WUX2 184 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 ST6GAL2Q96JF0 529 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 PFDN5Q99471 154 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 SLC39A9Q9NUM3 307 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 UQCC1Q9NVA1 299 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 OR5AC2Q9NZP5 309 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 TMEM14CQ9P0S9 112 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 TP53TG3Q9ULZ0 132 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 HHLA3Q9XRX5 114 aa8.34□□□□□ -1.07
COL5A1-207ENST00000469093 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
COL5A1-207ENST00000469093 IGHV3-53P01767 116 aa8.33□□□□□ -1.08
COL5A1-207ENST00000469093 GPX1P07203 203 aa8.33□□□□□ -1.08
COL5A1-207ENST00000469093 NMBP08949 121 aa8.33□□□□□ -1.08
COL5A1-207ENST00000469093 HIST1H1EP10412 219 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms