RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 DEFA5Q01523 94 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 GLIPR1L1Q6UWM5 242 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 COMMD7Q86VX2 200 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 STX19Q8N4C7 294 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 OR10X1Q8NGY0 326 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 OR4A5Q8NH83 315 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 MAFIPQ8WZ33 124 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 ARL11Q969Q4 196 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 MALSU1Q96EH3 234 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 S100A13Q99584 98 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF230Q9UIE0 474 aaPredicted RBP2.3□□□□□ -2.04
GPNMB-207ENST00000468723 LINC00312Q9Y6C7 94 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 S4R3C0 116 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.29□□□□□ -2.04
GPNMB-207ENST00000468723 IGHV3-21A0A0B4J1V1 117 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF729A6NN14 1252 aaPredicted RBP2.29□□□□□ -2.04
GPNMB-207ENST00000468723 COLCA2A8K830 154 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 K7EIL1 84 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 AIPO00170 330 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 PIN1P1O15428 100 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 TRGV3P03979 118 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 APELAP0DMC3 54 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 OR13C7P0DN81 318 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 BRS3P32247 399 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 PPP1CCP36873 323 aaKnown RBP2.29□□□□□ -2.04
GPNMB-207ENST00000468723 ACTBP60709 375 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 RPS25P62851 125 aaKnown RBP2.29□□□□□ -2.04
GPNMB-207ENST00000468723 PPP3R1P63098 170 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF709Q8N972 641 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 TMEM75Q8N9X5 138 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 OR11H6Q8NGC7 330 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 OR51T1Q8NGJ9 327 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 OR5D14Q8NGL3 314 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 PP6455Q8WZ26 134 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 TMEM203Q969S6 136 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 TMEM106AQ96A25 262 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 GALMQ96C23 342 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 HSPB9Q9BQS6 159 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 RTBDNQ9BSG5 229 aaPredicted RBP2.29□□□□□ -2.04
GPNMB-207ENST00000468723 CCDC90BQ9GZT6 254 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 ALX4Q9H161 411 aaPredicted RBP2.29□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF586Q9NXT0 402 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 TRAPPC2LQ9UL33 140 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 TENM1Q9UKZ4 2725 aa2.29□□□□□ -2.04
GPNMB-207ENST00000468723 IGLV4-60A0A075B6I1 120 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 TMEM30CPA0ZSE6 113 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 FUOMA2VDF0 154 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 OR5H14A6NHG9 310 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF98A6NK75 572 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 TMEM212A6NML5 194 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 C16orf90A8MZG2 172 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 MCRIP1C9JLW8 97 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 G3V318 75 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.28□□□□□ -2.04
GPNMB-207ENST00000468723 LY6LH3BQJ8 138 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 C15orf65H3BRN8 121 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 LTAP01374 205 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 IGLV7-43P04211 117 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 CD2P06729 351 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 CGB3P0DN86 165 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 CGB7P0DN87 165 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 CD36P16671 472 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 MYL12AP19105 171 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 ERP29P30040 261 aaKnown RBP2.28□□□□□ -2.04
GPNMB-207ENST00000468723 PSMB3P49720 205 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 AQP4P55087 323 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 TCL1AP56279 114 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 RBM11P57052 281 aaKnown RBP2.28□□□□□ -2.04
GPNMB-207ENST00000468723 DAD1P61803 113 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 RPS11P62280 158 aaKnown RBP eCLIP2.28□□□□□ -2.04
GPNMB-207ENST00000468723 SLC35A2P78381 396 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 EMX1Q04741 257 aaPredicted RBP2.28□□□□□ -2.04
GPNMB-207ENST00000468723 EIF4EBP1Q13541 118 aaPredicted RBP2.28□□□□□ -2.04
GPNMB-207ENST00000468723 RPL39P5Q59GN2 51 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 SPIN3Q5JUX0 258 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 SAPCD1Q5SSQ6 148 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 C1orf195Q5TG92 126 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 MINOS1Q5TGZ0 78 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 EBLN2Q6P2I7 272 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 RPL22L1Q6P5R6 122 aaKnown RBP2.28□□□□□ -2.04
GPNMB-207ENST00000468723 HEPN1Q6WQI6 88 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 Q6ZRU5 148 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 C6orf201Q7Z4U5 140 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 ATP5L2Q7Z4Y8 100 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 SLC35E3Q7Z769 313 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 NDUFA11Q86Y39 141 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 SGPP2Q8IWX5 399 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 Q8IYB0 196 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 C8orf59Q8N0T1 100 aaPredicted RBP2.28□□□□□ -2.04
GPNMB-207ENST00000468723 FER1L6-AS1Q8NA97 138 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 OR4X2Q8NGF9 303 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 OR1P1Q8NH06 330 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 MRPS24Q96EL2 167 aaKnown RBP2.28□□□□□ -2.04
GPNMB-207ENST00000468723 ABHD14BQ96IU4 210 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 FAM103A1Q9BTL3 118 aaKnown RBP2.28□□□□□ -2.04
GPNMB-207ENST00000468723 GTSF1LQ9H1H1 148 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 TAF9BQ9HBM6 251 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 KCNIP2Q9NS61 270 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF492Q9P255 531 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 ICOSQ9Y6W8 199 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms