RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 CTTNBP2Q8WZ74 1663 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 hCG_1818297A0A087WSY0 165 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 A0A0A6YYH2 397 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 A6NJ64 397 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 A8MT66 165 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 PIAS1O75925 651 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 MYL5Q02045 173 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 RRN3P1Q2M238 152 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 UBE2DNLQ8IWF7 75 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 OR6V1Q8N148 313 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 SREK1IP1Q8N9Q2 155 aaPredicted RBP-1.85□□□□□ -2.71
SSB-208ENST00000468600 CHCHD1Q96BP2 118 aaKnown RBP-1.85□□□□□ -2.71
SSB-208ENST00000468600 VPS13DQ5THJ4 4388 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 LRRK2Q5S007 2527 aa-1.85□□□□□ -2.71
SSB-208ENST00000468600 SPINK4O60575 86 aa-1.86□□□□□ -2.71
SSB-208ENST00000468600 APODP05090 189 aa-1.86□□□□□ -2.71
SSB-208ENST00000468600 SPINK8P0C7L1 97 aa-1.86□□□□□ -2.71
SSB-208ENST00000468600 HLA-EP13747 358 aa-1.86□□□□□ -2.71
SSB-208ENST00000468600 KLKP1Q107X0 134 aa-1.86□□□□□ -2.71
SSB-208ENST00000468600 DEFB135Q30KP9 77 aa-1.86□□□□□ -2.71
SSB-208ENST00000468600 FAM9CQ8IZT9 166 aa-1.86□□□□□ -2.71
SSB-208ENST00000468600 CT55Q8WUE5 264 aa-1.86□□□□□ -2.71
SSB-208ENST00000468600 POPDC3Q9HBV1 291 aa-1.86□□□□□ -2.71
SSB-208ENST00000468600 LAMA3Q16787 3333 aa-1.86□□□□□ -2.71
SSB-208ENST00000468600 PRKDCP78527 4128 aaKnown RBP-1.87□□□□□ -2.71
SSB-208ENST00000468600 LAMB1P07942 1786 aa-1.87□□□□□ -2.71
SSB-208ENST00000468600 FXYD6-FXYD2A0A087WZ82 144 aa-1.87□□□□□ -2.71
SSB-208ENST00000468600 CHP2O43745 196 aa-1.87□□□□□ -2.71
SSB-208ENST00000468600 MT1AP04731 61 aa-1.87□□□□□ -2.71
SSB-208ENST00000468600 DEFA3P59666 94 aa-1.87□□□□□ -2.71
SSB-208ENST00000468600 IAH1Q2TAA2 248 aaPredicted RBP-1.87□□□□□ -2.71
SSB-208ENST00000468600 EIF5AL1Q6IS14 154 aaKnown RBP-1.87□□□□□ -2.71
SSB-208ENST00000468600 LRRC18Q8N456 261 aa-1.87□□□□□ -2.71
SSB-208ENST00000468600 FXYD6Q9H0Q3 95 aa-1.87□□□□□ -2.71
SSB-208ENST00000468600 NAT8BQ9UHF3 227 aa-1.87□□□□□ -2.71
SSB-208ENST00000468600 CDK13Q14004 1512 aaKnown RBP-1.87□□□□□ -2.71
SSB-208ENST00000468600 DOCK11Q5JSL3 2073 aa-1.87□□□□□ -2.71
SSB-208ENST00000468600 KNL1Q8NG31 2342 aa-1.88□□□□□ -2.71
SSB-208ENST00000468600 DNHD1Q96M86 4753 aa-1.88□□□□□ -2.71
SSB-208ENST00000468600 LOC101927531A0A1B0GV80 90 aa-1.88□□□□□ -2.71
SSB-208ENST00000468600 hDV103S1A0JD37 113 aa-1.88□□□□□ -2.71
SSB-208ENST00000468600 APOC4-APOC2K7ER74 178 aa-1.88□□□□□ -2.71
SSB-208ENST00000468600 CNIH1O95406 144 aa-1.88□□□□□ -2.71
SSB-208ENST00000468600 C8GP07360 202 aa-1.88□□□□□ -2.71
SSB-208ENST00000468600 ZHX1-C8orf76Q96EF9 292 aa-1.88□□□□□ -2.71
SSB-208ENST00000468600 DCUN1D1Q96GG9 259 aa-1.88□□□□□ -2.71
SSB-208ENST00000468600 NPCDR1Q9BY65 106 aa-1.88□□□□□ -2.71
SSB-208ENST00000468600 RNASE7Q9H1E1 156 aaKnown RBP-1.88□□□□□ -2.71
SSB-208ENST00000468600 MGAM2Q2M2H8 2515 aa-1.88□□□□□ -2.71
SSB-208ENST00000468600 CCDC168Q8NDH2 2452 aa-1.89□□□□□ -2.71
SSB-208ENST00000468600 DSPPQ9NZW4 1301 aa-1.89□□□□□ -2.71
SSB-208ENST00000468600 GVQW2A0A096LPI5 108 aaPredicted RBP-1.89□□□□□ -2.71
SSB-208ENST00000468600 hADV38S2A0JD32 116 aa-1.89□□□□□ -2.71
SSB-208ENST00000468600 C9JAW5 83 aa-1.89□□□□□ -2.71
SSB-208ENST00000468600 HIST1H1EP10412 219 aaKnown RBP-1.89□□□□□ -2.71
SSB-208ENST00000468600 SKP1P63208 163 aa-1.89□□□□□ -2.71
SSB-208ENST00000468600 TMED1Q13445 227 aa-1.89□□□□□ -2.71
SSB-208ENST00000468600 DEFB112Q30KQ8 113 aa-1.89□□□□□ -2.71
SSB-208ENST00000468600 LYRM7Q5U5X0 104 aa-1.89□□□□□ -2.71
SSB-208ENST00000468600 SMIM11BQ8TCY0 68 aa-1.89□□□□□ -2.71
SSB-208ENST00000468600 TEX37Q96LM6 180 aa-1.89□□□□□ -2.71
SSB-208ENST00000468600 C10orf71Q711Q0 1435 aa-1.9□□□□□ -2.71
SSB-208ENST00000468600 FAM159BA6NKW6 160 aa-1.9□□□□□ -2.71
SSB-208ENST00000468600 KPNA3O00505 521 aaPredicted RBP-1.9□□□□□ -2.71
SSB-208ENST00000468600 TNNC2P02585 160 aa-1.9□□□□□ -2.71
SSB-208ENST00000468600 SNRPD3P62318 126 aaKnown RBP-1.9□□□□□ -2.71
SSB-208ENST00000468600 C1orf140Q5VVS0 124 aa-1.9□□□□□ -2.71
SSB-208ENST00000468600 C8orf76Q96K31 380 aa-1.9□□□□□ -2.71
SSB-208ENST00000468600 UQCC1Q9NVA1 299 aa-1.9□□□□□ -2.71
SSB-208ENST00000468600 USE1Q9NZ43 259 aa-1.9□□□□□ -2.71
SSB-208ENST00000468600 HELZP42694 1942 aaKnown RBP-1.9□□□□□ -2.71
SSB-208ENST00000468600 BICRAQ9NZM4 1560 aa-1.9□□□□□ -2.71
SSB-208ENST00000468600 HTTP42858 3142 aa-1.91□□□□□ -2.71
SSB-208ENST00000468600 PKD1P98161 4303 aa-1.91□□□□□ -2.71
SSB-208ENST00000468600 DUXBA0A1W2PPF3 345 aa-1.91□□□□□ -2.72
SSB-208ENST00000468600 TAX1BP3O14907 124 aa-1.91□□□□□ -2.72
SSB-208ENST00000468600 DEXIO95424 95 aa-1.91□□□□□ -2.72
SSB-208ENST00000468600 GYPBP06028 91 aa-1.91□□□□□ -2.72
SSB-208ENST00000468600 PIGPP57054 158 aa-1.91□□□□□ -2.72
SSB-208ENST00000468600 UBE2BP63146 152 aa-1.91□□□□□ -2.72
SSB-208ENST00000468600 DCDP81605 110 aaKnown RBP-1.91□□□□□ -2.72
SSB-208ENST00000468600 BCL2L15Q5TBC7 163 aa-1.91□□□□□ -2.72
SSB-208ENST00000468600 PTH2Q96A98 100 aa-1.91□□□□□ -2.72
SSB-208ENST00000468600 GLTPQ9NZD2 209 aa-1.91□□□□□ -2.72
SSB-208ENST00000468600 MRPL35Q9NZE8 188 aaKnown RBP-1.91□□□□□ -2.72
SSB-208ENST00000468600 SPCS1Q9Y6A9 102 aa-1.91□□□□□ -2.72
SSB-208ENST00000468600 SNAPC4Q5SXM2 1469 aa-1.92□□□□□ -2.72
SSB-208ENST00000468600 TRAV17A0A0B4J275 112 aa-1.92□□□□□ -2.72
SSB-208ENST00000468600 TMEM256-PLSCR3K7ERE1 68 aa-1.92□□□□□ -2.72
SSB-208ENST00000468600 GCHFRP30047 84 aa-1.92□□□□□ -2.72
SSB-208ENST00000468600 SULT1A1P50225 295 aa-1.92□□□□□ -2.72
SSB-208ENST00000468600 DYNLT3P51808 116 aa-1.92□□□□□ -2.72
SSB-208ENST00000468600 FAM151BQ6UXP7 276 aa-1.92□□□□□ -2.72
SSB-208ENST00000468600 LINC00269Q8N2A0 174 aa-1.92□□□□□ -2.72
SSB-208ENST00000468600 OR4K15Q8NH41 348 aa-1.92□□□□□ -2.72
SSB-208ENST00000468600 GRPEL2Q8TAA5 225 aa-1.92□□□□□ -2.72
SSB-208ENST00000468600 PKD1L2Q7Z442 2459 aa-1.92□□□□□ -2.72
SSB-208ENST00000468600 FAT3Q8TDW7 4589 aa-1.93□□□□□ -2.72
SSB-208ENST00000468600 ATG2AQ2TAZ0 1938 aa-1.93□□□□□ -2.72
SSB-208ENST00000468600 MTORP42345 2549 aa-1.93□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms