RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PAFAH1B2P68402 229 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 PEA15Q15121 130 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 JMJD1CQ15652 2540 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 GUCA2BQ16661 112 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 GUK1Q16774 197 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 PAPPA-AS1Q5QFB9 102 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 WDR73Q6P4I2 378 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 ADAMTSL5Q6ZMM2 481 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 EXOC3-AS1Q8N2X6 119 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 SPATA3Q8NHX4 192 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 FXYD5Q96DB9 178 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 NSD1Q96L73 2696 aaPredicted RBP3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 TMEM167BQ9NRX6 74 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 MLXQ9UH92 298 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 RNF24Q9Y225 148 aa3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 YTHDF2Q9Y5A9 579 aaKnown RBP3.06□□□□□ -1.92
TMEM39A-204ENST00000468545 TRBV19A0A075B6N1 114 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 TRAV1-1A0A0B4J248 108 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 LINC00862A6NCI5 91 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 IZUMO1RA6ND01 250 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 FAM74A7A6NL05 159 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 ZNF705FA8MVS1 300 aaPredicted RBP3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 A8MWP6 167 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 C11orf94C9JXX5 98 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 SLC17A3O00476 420 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 MRPS12O15235 138 aaKnown RBP3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 GP9P14770 177 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 IGLL1P15814 213 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 ID1P41134 155 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 PPT1P50897 306 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 GNG5P63218 68 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 PSG9Q00887 426 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 ZNF674Q2M3X9 581 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 DEFB114Q30KQ6 69 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 C1orf194Q5T5A4 169 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 RNF182Q8N6D2 247 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 LYPD6BQ8NI32 183 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 CMTM2Q8TAZ6 248 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 SGK494Q96LW2 274 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 FAM210AQ96ND0 272 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 GPR82Q96P67 336 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 ASCL2Q99929 193 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 MS4A6AQ9H2W1 248 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 Q9H3A6 140 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 MANBALQ9NQG1 85 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 MED9Q9NWA0 146 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 TMEM14CQ9P0S9 112 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 VAX2Q9UIW0 290 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 C2CD3Q4AC94 2353 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 MAST4O15021 2626 aa3.05□□□□□ -1.92
TMEM39A-204ENST00000468545 TRAV8-2A0A0B4J237 113 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 TRAV34A0A0B4J273 112 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 A0A1W2PRE2 83 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 RAB19A4D1S5 217 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 C9JQL5 133 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 PRAC2D3DTV9 90 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 M0R3E3 92 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 IGKV3-20P01619 116 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 SRP19P09132 144 aaKnown RBP3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 ZNF688P0C7X2 276 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 ZNF705DP0CH99 300 aaPredicted RBP3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 ZNF705BP0CI00 300 aaPredicted RBP3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 IGLC2P0DOY2 106 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 BCL2P10415 239 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 CSN1S1P47710 185 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 DEFB1P60022 68 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 ERCC8Q13216 396 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 PSG3Q16557 428 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 NDUFA5Q16718 116 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 PSMG4Q5JS54 123 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 ZNF506Q5JVG8 444 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 C9orf66Q5T8R8 295 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 LCN12Q6JVE5 192 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 TMEM61Q8N0U2 210 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 FAM24BQ8N5W8 94 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 ZNF738Q8NE65 137 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 RPUSD4Q96CM3 377 aaKnown RBP3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 LINC00479Q96M42 142 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 NRN1Q9NPD7 142 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 OTORQ9NRC9 128 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 EPDR1Q9UM22 224 aa3.04□□□□□ -1.92
TMEM39A-204ENST00000468545 NF1P21359 2839 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 NIPBLQ6KC79 2804 aaeCLIP3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 SETD2Q9BYW2 2564 aaPredicted RBP3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 IGKV2-40A0A087WW87 121 aaPredicted RBP3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 A0A087X0K7 114 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 OR4C46A6NHA9 309 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 KNCNA6PVL3 124 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 KRTAP29-1A8MX34 341 aaPredicted RBP3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 GGTLC3B5MD39 225 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 F6UB75 175 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 F6UZH7 168 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 F8W036 122 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 K7EQG2 157 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 PEX7O00628 323 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 IGKV2D-40P01614 121 aaPredicted RBP3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 CD5P06127 495 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 SFTA3P0C7M3 94 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms