RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, human

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIF1-209	ENST00000467762		Q56UQ5	140 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	EBLN2	Q6P2I7	272 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	SLC25A34	Q6PIV7	304 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	FA2H	Q7L5A8	372 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762		Q8N1X5	172 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	RABAC1	Q9UI14	185 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762		U3KQK5	164 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	IGHV1-24	A0A0C4DH33	117 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	PLAU	P00749	431 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	IGHV3-48	P01763	117 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	IL4	P05112	153 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	IGLL1	P15814	213 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	COX7A1	P24310	79 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	CNTFR	P26992	372 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	G0S2	P27469	103 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	KLRB1	Q12918	225 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	BATF	Q16520	125 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	FAM120AOS	Q5T036	256 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	LINC01545	Q5VT33	79 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	FAM104B	Q5XKR9	115 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	ORMDL3	Q8N138	153 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762		Q8N6K4	173 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	PRSS3P2	Q8NHM4	247 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	PIFO	Q8TCI5	191 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	ARPC1A	Q92747	370 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	SLC50A1	Q9BRV3	221 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	TM2D2	Q9BX73	214 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	C21orf62	Q9NYP8	219 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	COX11	Q9Y6N1	276 aa		4.09	□□□□□ -1.75
RIF1-209	ENST00000467762	CAD	P27708	2225 aa		4.09	□□□□□ -1.76
RIF1-209	ENST00000467762	LINC01546	A6NGU7	62 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	FABP5P3	A8MUU1	101 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	CD5L	O43866	347 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	FSHB	P01225	129 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	UBE2E1	P51965	193 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	SEC11A	P67812	179 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	HIST1H1A	Q02539	215 aa	Predicted RBP	4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	MRPL23	Q16540	153 aa	Known RBP	4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	LGALS9B	Q3B8N2	356 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	ARFGEF3	Q5TH69	2177 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	LGALS9C	Q6DKI2	356 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	EXOC3-AS1	Q8N2X6	119 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	STPG4	Q8N801	248 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	ZC2HC1A	Q96GY0	325 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	URB1-AS1	Q96HZ7	61 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	CNFN	Q9BYD5	112 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	SMPX	Q9UHP9	88 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	MYO15A	Q9UKN7	3530 aa		4.08	□□□□□ -1.76
RIF1-209	ENST00000467762	MALRD1	Q5VYJ5	2156 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	ZGRF1	Q86YA3	2104 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	TRBV7-1	A0A0A6YYK4	115 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762		A6NDN8	102 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762		K7EP13	123 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	CCL21	O00585	134 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	BRI3	O95415	125 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	COX8A	P10176	69 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	RPL13A	P40429	203 aa	Known RBP	4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	ARF6	P62330	175 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	HES1	Q14469	280 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	LEMD1	Q68G75	181 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	C11orf71	Q6IPW1	123 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	SMIM15	Q7Z3B0	74 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	VMO1	Q7Z5L0	202 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	DEFB125	Q8N687	156 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	OR4X2	Q8NGF9	303 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	LINC01560	Q8TB33	94 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	PRELID3A	Q96N28	172 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	ZNF747	Q9BV97	191 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	NXT2	Q9NPJ8	142 aa	Known RBP	4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	SCRT2	Q9NQ03	307 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	LENEP	Q9Y5L5	61 aa		4.07	□□□□□ -1.76
RIF1-209	ENST00000467762	SPEG	Q15772	3267 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	PLCE1	Q9P212	2302 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	ZNF318	Q5VUA4	2279 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	TRAV8-1	A0A0A6YYK1	113 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	IGHV3-21	A0A0B4J1V1	117 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762		A0A1W2PRD5	423 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762		A0A1W2PRF3	423 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762		A0A1W2PRM7	423 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	LINC01549	A6NIU2	74 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762		K7EMI3	77 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	OVOL3	O00110	214 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	TCF21	O43680	179 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	SH2D1A	O60880	128 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	HBD	P02042	147 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	CTSG	P08311	255 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	ARMS2	P0C7Q2	107 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	IGLC6	P0CF74	106 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	GPR183	P32249	361 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	HINT1	P49773	126 aa	Predicted RBP	4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	CRIP1	P50238	77 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	CACNG7	P62955	275 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	RHOG	P84095	191 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	NHLH1	Q02575	133 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	BEAN1	Q3B7T3	259 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	RUSC1-AS1	Q66K80	236 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	LCN12	Q6JVE5	192 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762	LYZL1	Q6UWQ5	148 aa		4.06	□□□□□ -1.76
RIF1-209	ENST00000467762		Q75L30	129 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms