RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 NCKAP5O14513 1909 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 H3BRM9 83 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 ELANEP08246 267 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 CGB3P0DN86 165 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 CGB7P0DN87 165 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 AMN1Q8IY45 258 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 V9GYV3 84 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 SSBP2P81877 361 aaPredicted RBP10.9□□□□□ -0.66
BRAT1-203ENST00000467558 PRR31Q5SQ13 230 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 RNF114Q9Y508 228 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 LINC00587B1AMM8 73 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 H7C2G1 150 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 PRB1P04280 392 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 ZNF415Q09FC8 603 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 SPTBN4Q9H254 2564 aa10.9□□□□□ -0.66
BRAT1-203ENST00000467558 LOC102724200A0A096LPH7 203 aaPredicted RBP10.89□□□□□ -0.67
BRAT1-203ENST00000467558 TRGV4A0A0C4DH28 118 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 DEFB131AP59861 70 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 Q0VG73 95 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 Q6ZPA2 131 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 C22orf34Q6ZV56 151 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 IGHV7-81A0A0B4J1V7 117 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 C14orf178Q8N769 122 aaPredicted RBP10.89□□□□□ -0.67
BRAT1-203ENST00000467558 ALKBH7Q9BT30 221 aaPredicted RBP10.89□□□□□ -0.67
BRAT1-203ENST00000467558 ZMAT5Q9UDW3 170 aaKnown RBP10.89□□□□□ -0.67
BRAT1-203ENST00000467558 SMPXQ9UHP9 88 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 LAMTOR2Q9Y2Q5 125 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 TNCP24821 2201 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 K7ERU9 68 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 COTL1Q14019 142 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 PYY3Q5JQD4 70 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 C1QTNF4Q9BXJ3 329 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 INS-IGF2F8WCM5 200 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 LINC01619G3V211 115 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 DEFB112Q30KQ8 113 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 SPOCK3Q9BQ16 436 aa10.89□□□□□ -0.67
BRAT1-203ENST00000467558 DYSFO75923 2080 aa10.88□□□□□ -0.67
BRAT1-203ENST00000467558 CIDEAO60543 219 aa10.88□□□□□ -0.67
BRAT1-203ENST00000467558 RITA1Q96K30 269 aa10.88□□□□□ -0.67
BRAT1-203ENST00000467558 LINC00574Q9H8X3 128 aa10.88□□□□□ -0.67
BRAT1-203ENST00000467558 SMIM13P0DJ93 91 aa10.88□□□□□ -0.67
BRAT1-203ENST00000467558 INSP01308 110 aa10.88□□□□□ -0.67
BRAT1-203ENST00000467558 I3L2K1 104 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 K7EIM0 57 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 IGKV1-17P01599 117 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 DEFB113Q30KQ7 82 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 C8orf49Q96NF6 230 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 PLA2G2EQ9NZK7 142 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 VPREB3Q9UKI3 123 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 C3orf79P0CE67 100 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 HIVEP2P31629 2446 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 A8MWP6 167 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 IGHV4-59P01825 116 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 HTN3P15516 51 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 Q8N7P7 452 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 PRORYQ9H606 182 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 PRSS46E5RG02 174 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 VCYO14598 125 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 PROP1O75360 226 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 TCTEX1D4Q5JR98 221 aa10.87□□□□□ -0.67
BRAT1-203ENST00000467558 CHD3Q12873 2000 aaKnown RBP10.87□□□□□ -0.67
BRAT1-203ENST00000467558 SONP18583 2426 aaKnown RBP10.87□□□□□ -0.67
BRAT1-203ENST00000467558 IGLV11-55A0A075B6I3 123 aa10.86□□□□□ -0.67
BRAT1-203ENST00000467558 HOXA3O43365 443 aaPredicted RBP10.86□□□□□ -0.67
BRAT1-203ENST00000467558 IGKCP01834 107 aa10.86□□□□□ -0.67
BRAT1-203ENST00000467558 MS4A6AQ9H2W1 248 aa10.86□□□□□ -0.67
BRAT1-203ENST00000467558 ZFP36P26651 326 aaKnown RBP10.86□□□□□ -0.67
BRAT1-203ENST00000467558 FXYD7P58549 80 aa10.86□□□□□ -0.67
BRAT1-203ENST00000467558 ZNF876PQ49A33 203 aa10.86□□□□□ -0.67
BRAT1-203ENST00000467558 MRAP2Q96G30 205 aa10.86□□□□□ -0.67
BRAT1-203ENST00000467558 IGLV2-23P01705 113 aa10.86□□□□□ -0.67
BRAT1-203ENST00000467558 CHTOPQ9Y3Y2 248 aaKnown RBP10.86□□□□□ -0.67
BRAT1-203ENST00000467558 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 SMIM27A0A1W2PRY6 76 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 IGHV4-38-2P0DP08 117 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 Q8N9W7 124 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 IGFBPL1Q8WX77 278 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 A0A1B0GV90 55 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 P0C879 139 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 C18orf32Q8TCD1 76 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 C11orf1Q9H5F2 150 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 CHD8Q9HCK8 2581 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 FAM104BQ5XKR9 115 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 TRGV1A0A0A0MS02 117 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 TMEM213A2RRL7 107 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 CD28P10747 220 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 OR2K2Q8NGT1 345 aa10.85□□□□□ -0.67
BRAT1-203ENST00000467558 MYO18BQ8IUG5 2567 aa10.84□□□□□ -0.67
BRAT1-203ENST00000467558 SMKR1H3BMG3 65 aa10.84□□□□□ -0.67
BRAT1-203ENST00000467558 PLP1P60201 277 aa10.84□□□□□ -0.67
BRAT1-203ENST00000467558 RPL36AP83881 106 aaKnown RBP10.84□□□□□ -0.67
BRAT1-203ENST00000467558 RPL36ALQ969Q0 106 aaKnown RBP10.84□□□□□ -0.67
BRAT1-203ENST00000467558 SYS1-DBNDD2H3BUS1 97 aa10.84□□□□□ -0.67
BRAT1-203ENST00000467558 ZC2HC1AQ96GY0 325 aa10.84□□□□□ -0.67
BRAT1-203ENST00000467558 UBE2E2Q96LR5 201 aa10.84□□□□□ -0.67
BRAT1-203ENST00000467558 C17orf77Q96MU5 243 aa10.83□□□□□ -0.68
BRAT1-203ENST00000467558 TNFRSF6BO95407 300 aa10.83□□□□□ -0.68
BRAT1-203ENST00000467558 SPINK13Q1W4C9 94 aa10.83□□□□□ -0.68
BRAT1-203ENST00000467558 PATE2Q6UY27 113 aa10.83□□□□□ -0.68
BRAT1-203ENST00000467558 XIRP2A4UGR9 3374 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms