RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 LINC00477Q96M19 166 aa10.03□□□□□ -0.8
CCHCR1-211ENST00000467553 NDUFAF3Q9BU61 184 aa10.03□□□□□ -0.8
CCHCR1-211ENST00000467553 DKK2Q9UBU2 259 aa10.03□□□□□ -0.8
CCHCR1-211ENST00000467553 TNFSF18Q9UNG2 199 aa10.03□□□□□ -0.8
CCHCR1-211ENST00000467553 RNF222A6NCQ9 220 aa10.02□□□□□ -0.81
CCHCR1-211ENST00000467553 LEPP41159 167 aa10.02□□□□□ -0.81
CCHCR1-211ENST00000467553 NIPSNAP3BQ9BS92 247 aa10.02□□□□□ -0.81
CCHCR1-211ENST00000467553 AGPAT4-IT1Q9H0P7 198 aa10.02□□□□□ -0.81
CCHCR1-211ENST00000467553 HERC2O95714 4834 aa10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 IGKV2-40A0A087WW87 121 aaPredicted RBP10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 BORCS7-ASMTA0A0B4J1R7 106 aa10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 TRAV12-3A0A0B4J271 114 aa10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 SMLR1H3BR10 107 aa10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 IGKV2D-40P01614 121 aaPredicted RBP10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 CSN1S1P47710 185 aa10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 TAS2R60P59551 318 aa10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 GFI1BQ5VTD9 330 aa10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 RPL7L1Q6DKI1 246 aaKnown RBP10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 POM121L12Q8N7R1 296 aa10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 Q9H3A6 140 aa10.01□□□□□ -0.81
CCHCR1-211ENST00000467553 G3V3Q6 166 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 H7BYZ3 331 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 ARPC5O15511 151 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 CDC34P49427 236 aaPredicted RBP10□□□□□ -0.81
CCHCR1-211ENST00000467553 DAD1P61803 113 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 SERF2P84101 59 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 TMEM78Q5T7P6 136 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 PQLC2Q6ZP29 291 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 C9orf47Q6ZRZ4 202 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 LYPD1Q8N2G4 141 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 OR2G3Q8NGZ4 309 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 HYLS1Q96M11 299 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 ODF3Q96PU9 254 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 VGLL1Q99990 258 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 C20orf144Q9BQM9 153 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 PSMG3Q9BT73 122 aaPredicted RBP10□□□□□ -0.81
CCHCR1-211ENST00000467553 SH3BGRL3Q9H299 93 aa10□□□□□ -0.81
CCHCR1-211ENST00000467553 PKHD1P08F94 4074 aa9.99□□□□□ -0.81
CCHCR1-211ENST00000467553 PGPA6NDG6 321 aa9.99□□□□□ -0.81
CCHCR1-211ENST00000467553 MBP02144 154 aa9.99□□□□□ -0.81
CCHCR1-211ENST00000467553 HTN3P15516 51 aa9.99□□□□□ -0.81
CCHCR1-211ENST00000467553 RNASE4P34096 147 aaKnown RBP9.99□□□□□ -0.81
CCHCR1-211ENST00000467553 CCDC28AQ8IWP9 274 aa9.99□□□□□ -0.81
CCHCR1-211ENST00000467553 SLC25A5P05141 298 aaKnown RBP9.98□□□□□ -0.81
CCHCR1-211ENST00000467553 GPX1P07203 203 aa9.98□□□□□ -0.81
CCHCR1-211ENST00000467553 RAB24Q969Q5 203 aa9.98□□□□□ -0.81
CCHCR1-211ENST00000467553 GNPNAT1Q96EK6 184 aaPredicted RBP9.98□□□□□ -0.81
CCHCR1-211ENST00000467553 ZNF492Q9P255 531 aa9.98□□□□□ -0.81
CCHCR1-211ENST00000467553 RPH3ALQ9UNE2 315 aa9.98□□□□□ -0.81
CCHCR1-211ENST00000467553 C7orf71A4D174 169 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 LYRM9A8MSI8 78 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 ARL14EPLP0DKL9 152 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 DEFB130BP0DP73 79 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 DEFB130AP0DP74 79 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 ZNF138P52744 262 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 CD300CQ08708 224 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 BTN1A1Q13410 526 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 LGALS9BQ3B8N2 356 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 FAM74A1Q5RGS3 127 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 CMTM2Q8TAZ6 248 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 RXFP4Q8TDU9 374 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 C16orf74Q96GX8 76 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 ACTR3CQ9C0K3 210 aaPredicted RBP9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 OTORQ9NRC9 128 aa9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 TIMM8BQ9Y5J9 83 aaPredicted RBP9.97□□□□□ -0.81
CCHCR1-211ENST00000467553 PLAC8L1A1L4L8 177 aa9.96□□□□□ -0.82
CCHCR1-211ENST00000467553 DIRC3C9JPN6 131 aa9.96□□□□□ -0.82
CCHCR1-211ENST00000467553 TAAR5O14804 337 aa9.96□□□□□ -0.82
CCHCR1-211ENST00000467553 STAG3L2P0CL84 134 aa9.96□□□□□ -0.82
CCHCR1-211ENST00000467553 STAG3L3P0CL85 134 aa9.96□□□□□ -0.82
CCHCR1-211ENST00000467553 RNF212Q495C1 297 aa9.96□□□□□ -0.82
CCHCR1-211ENST00000467553 TMEM263Q8WUH6 116 aaKnown RBP9.96□□□□□ -0.82
CCHCR1-211ENST00000467553 FAM19A4Q96LR4 140 aa9.96□□□□□ -0.82
CCHCR1-211ENST00000467553 NOP10Q9NPE3 64 aaKnown RBP9.96□□□□□ -0.82
CCHCR1-211ENST00000467553 PKD1P98161 4303 aa9.95□□□□□ -0.82
CCHCR1-211ENST00000467553 KLLNB2CW77 178 aa9.95□□□□□ -0.82
CCHCR1-211ENST00000467553 ZNF324O75467 553 aaPredicted RBP9.95□□□□□ -0.82
CCHCR1-211ENST00000467553 CRISP2P16562 243 aa9.95□□□□□ -0.82
CCHCR1-211ENST00000467553 GCHFRP30047 84 aa9.95□□□□□ -0.82
CCHCR1-211ENST00000467553 IQCF2Q8IXL9 164 aa9.95□□□□□ -0.82
CCHCR1-211ENST00000467553 Q8TAT8 98 aa9.95□□□□□ -0.82
CCHCR1-211ENST00000467553 PYGO2Q9BRQ0 406 aa9.95□□□□□ -0.82
CCHCR1-211ENST00000467553 CYTL1Q9NRR1 136 aa9.95□□□□□ -0.82
CCHCR1-211ENST00000467553 RBAKDNA6NC62 111 aa9.94□□□□□ -0.82
CCHCR1-211ENST00000467553 SNURFLB1AK76 121 aa9.94□□□□□ -0.82
CCHCR1-211ENST00000467553 NMBP08949 121 aa9.94□□□□□ -0.82
CCHCR1-211ENST00000467553 GOLT1AQ6ZVE7 132 aa9.94□□□□□ -0.82
CCHCR1-211ENST00000467553 ZFAND2AQ8N6M9 145 aa9.94□□□□□ -0.82
CCHCR1-211ENST00000467553 OR11H4Q8NGC9 324 aa9.94□□□□□ -0.82
CCHCR1-211ENST00000467553 RNASE8Q8TDE3 154 aaKnown RBP9.94□□□□□ -0.82
CCHCR1-211ENST00000467553 CXorf1O96002 111 aa9.93□□□□□ -0.82
CCHCR1-211ENST00000467553 FAM3BP58499 235 aaPredicted RBP9.93□□□□□ -0.82
CCHCR1-211ENST00000467553 GNG5P63218 68 aa9.93□□□□□ -0.82
CCHCR1-211ENST00000467553 AKR1C8PQ5T2L2 129 aa9.93□□□□□ -0.82
CCHCR1-211ENST00000467553 PRR9Q5T870 116 aa9.93□□□□□ -0.82
CCHCR1-211ENST00000467553 Q6ZQT7 251 aa9.93□□□□□ -0.82
CCHCR1-211ENST00000467553 SSX7Q7RTT5 188 aa9.93□□□□□ -0.82
CCHCR1-211ENST00000467553 KCNRGQ8N5I3 272 aa9.93□□□□□ -0.82
CCHCR1-211ENST00000467553 ARPC5LQ9BPX5 153 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms