RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 TRAV12-2A0A075B6T6 113 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 MAP1LC3B2A6NCE7 125 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 KLLNB2CW77 178 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 C3orf84H3BNL1 204 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 CRISP2P16562 243 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 TSPOP30536 169 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 ERCC8Q13216 396 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 KIR3DS1Q14943 382 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 ZFP69Q49AA0 526 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 GFI1BQ5VTD9 330 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 IL17DQ8TAD2 202 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 LINC00477Q96M19 166 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 VGLL1Q99990 258 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 MAP1LC3BQ9GZQ8 125 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 AGPAT4-IT1Q9H0P7 198 aa7.96□□□□□ -1.14
MSH5-212ENST00000467319 RYR3Q15413 4870 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 TRBV7-9A0A0J9YWB2 115 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 SMIM9A6NGZ8 99 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 DIRC3C9JPN6 131 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 DEFB4AO15263 64 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 NMBP08949 121 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 LEPP41159 167 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 CSN1S1P47710 185 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 DPPA3Q6W0C5 159 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 SLC51BQ86UW2 128 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 ZFAND2AQ8N6M9 145 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 C5orf17Q8NAS9 161 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 RXFP4Q8TDU9 374 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 C20orf144Q9BQM9 153 aa7.95□□□□□ -1.14
MSH5-212ENST00000467319 A0A1W2PRE2 83 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 PGPA6NDG6 321 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 ZNF138P52744 262 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 FGF8P55075 233 aaPredicted RBP7.94□□□□□ -1.14
MSH5-212ENST00000467319 FAM74A1Q5RGS3 127 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 CASC10Q5T4H9 136 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 TMEM78Q5T7P6 136 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 TMEM256Q8N2U0 113 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 Q8TAT8 98 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 FAM213BQ8TBF2 198 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 MBD3L1Q8WWY6 194 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 TMPRSS5Q9H3S3 457 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 PPP1R14DQ9NXH3 145 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 ZNF492Q9P255 531 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 YTHDF2Q9Y5A9 579 aaKnown RBP7.94□□□□□ -1.14
MSH5-212ENST00000467319 ARL2-SNX15V9GYD0 113 aa7.94□□□□□ -1.14
MSH5-212ENST00000467319 IGHV3OR16-12A0A075B7B8 117 aa7.93□□□□□ -1.14
MSH5-212ENST00000467319 SERTM2A0A1B0GWG4 89 aa7.93□□□□□ -1.14
MSH5-212ENST00000467319 PLAC8L1A1L4L8 177 aa7.93□□□□□ -1.14
MSH5-212ENST00000467319 HBE1P02100 147 aa7.93□□□□□ -1.14
MSH5-212ENST00000467319 GNG5P63218 68 aa7.93□□□□□ -1.14
MSH5-212ENST00000467319 PRR9Q5T870 116 aa7.93□□□□□ -1.14
MSH5-212ENST00000467319 GOLT1AQ6ZVE7 132 aa7.93□□□□□ -1.14
MSH5-212ENST00000467319 CMTM2Q8TAZ6 248 aa7.93□□□□□ -1.14
MSH5-212ENST00000467319 CELA1Q9UNI1 258 aa7.93□□□□□ -1.14
MSH5-212ENST00000467319 LENEPQ9Y5L5 61 aa7.93□□□□□ -1.14
MSH5-212ENST00000467319 LOC102723971A0A1B0GUV8 181 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 C7orf71A4D174 169 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 TMEM189A5PLL7 270 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 FAM74A7A6NL05 159 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 H7BYZ3 331 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 TCRAP04437 139 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 RAB5CP51148 216 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 TAS2R60P59551 318 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 BTN1A1Q13410 526 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 RRN3P1Q2M238 152 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 EIF5AL1Q6IS14 154 aaKnown RBP7.92□□□□□ -1.14
MSH5-212ENST00000467319 IQCF2Q8IXL9 164 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 TMEM208Q9BTX3 173 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 VPS13DQ5THJ4 4388 aa7.92□□□□□ -1.14
MSH5-212ENST00000467319 TRAV8-1A0A0A6YYK1 113 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 TRAV1-1A0A0B4J248 108 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 ZNF705GA8MUZ8 300 aaPredicted RBP7.91□□□□□ -1.14
MSH5-212ENST00000467319 ZNF324O75467 553 aaPredicted RBP7.91□□□□□ -1.14
MSH5-212ENST00000467319 IGLV2-11P01706 119 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 SULT1A2P50226 295 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 NKX2-5P52952 324 aaPredicted RBP7.91□□□□□ -1.14
MSH5-212ENST00000467319 ZFAND6Q6FIF0 208 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 CCDC28AQ8IWP9 274 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 CYB561D1Q8N8Q1 229 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 C11orf45Q8TAV5 145 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 RNASE8Q8TDE3 154 aaKnown RBP7.91□□□□□ -1.14
MSH5-212ENST00000467319 LINC00467Q9BRT7 94 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 ATG101Q9BSB4 218 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 EPDR1Q9UM22 224 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 RPH3ALQ9UNE2 315 aa7.91□□□□□ -1.14
MSH5-212ENST00000467319 TRAV12-3A0A0B4J271 114 aa7.9□□□□□ -1.14
MSH5-212ENST00000467319 J3KRW8 73 aa7.9□□□□□ -1.14
MSH5-212ENST00000467319 PRM2P04554 102 aa7.9□□□□□ -1.14
MSH5-212ENST00000467319 H2AFB1P0C5Y9 115 aa7.9□□□□□ -1.14
MSH5-212ENST00000467319 NANOS2P60321 138 aaKnown RBP7.9□□□□□ -1.14
MSH5-212ENST00000467319 UBE2G2P60604 165 aa7.9□□□□□ -1.14
MSH5-212ENST00000467319 SUMO1P63165 101 aaKnown RBP7.9□□□□□ -1.14
MSH5-212ENST00000467319 TMEM75Q8N9X5 138 aa7.9□□□□□ -1.14
MSH5-212ENST00000467319 TMEM263Q8WUH6 116 aaKnown RBP7.9□□□□□ -1.14
MSH5-212ENST00000467319 SFT2D1Q8WV19 159 aa7.9□□□□□ -1.14
MSH5-212ENST00000467319 TVP23CQ96ET8 276 aa7.9□□□□□ -1.14
MSH5-212ENST00000467319 PYGO2Q9BRQ0 406 aa7.9□□□□□ -1.14
MSH5-212ENST00000467319 TCEAL7Q9BRU2 100 aa7.9□□□□□ -1.14
MSH5-212ENST00000467319 NKX6-2Q9C056 277 aaPredicted RBP7.9□□□□□ -1.14
MSH5-212ENST00000467319 DKK2Q9UBU2 259 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms