RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 IL3RAP26951 378 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF138P52744 262 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 MRPS36P82909 103 aaKnown RBP4.19□□□□□ -1.74
LRCH3-212ENST00000466845 CDK5R1Q15078 307 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 LINC00173Q6ZV60 143 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF101Q8IZC7 436 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 Q8N2B8 174 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 POM121L12Q8N7R1 296 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 MORN4Q8NDC4 146 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 MYOZ3Q8TDC0 251 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 ABHD14BQ96IU4 210 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 SIX2Q9NPC8 291 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 HCFC1P51610 2035 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 TICRRQ7Z2Z1 1910 aa4.19□□□□□ -1.74
LRCH3-212ENST00000466845 ZFHX2Q9C0A1 2572 aaPredicted RBP4.18□□□□□ -1.74
LRCH3-212ENST00000466845 C17orf112F2Z3M2 114 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 K7ERJ3 54 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF253O75346 499 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 IGLV3-27P01718 113 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 IGKCP01834 107 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 FAUP35544 74 aaKnown RBP4.18□□□□□ -1.74
LRCH3-212ENST00000466845 ERVK-16P61578 105 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 SNRPFP62306 86 aaKnown RBP4.18□□□□□ -1.74
LRCH3-212ENST00000466845 RPL23P62829 140 aaKnown RBP4.18□□□□□ -1.74
LRCH3-212ENST00000466845 KIAA0087Q14695 138 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 EBLN2Q6P2I7 272 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 C19orf48Q6RUI8 117 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 SBSPONQ8IVN8 264 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 APCDD1LQ8NCL9 501 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 CMTM2Q8TAZ6 248 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 FAM57AQ8TBR7 257 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 TAF15Q92804 592 aaKnown RBP eCLIP4.18□□□□□ -1.74
LRCH3-212ENST00000466845 HIST1H4GQ99525 98 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 SCRT1Q9BWW7 348 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 GABARAPL3Q9BY60 117 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 PARP12Q9H0J9 701 aaKnown RBP4.18□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF702PQ9H963 129 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 SDF2L1Q9HCN8 221 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF835Q9Y2P0 537 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 TRIOO75962 3097 aa4.18□□□□□ -1.74
LRCH3-212ENST00000466845 LRRK1Q38SD2 2015 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 PATJQ8NI35 1801 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 IGHV3OR16-13A0A075B7E8 117 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 FXYD6-FXYD2A0A087WZ82 144 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 ZFP92A6NM28 416 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 BUB1B-PAK6H3BSN5 160 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 K7EM74 188 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 SDCBPO00560 298 aaPredicted RBP4.17□□□□□ -1.74
LRCH3-212ENST00000466845 CD7P09564 240 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 IGHV4-30-4P0DP06 118 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF136P52737 540 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 ADIGQ0VDE8 80 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 RBMY1FQ15415 496 aaKnown RBP4.17□□□□□ -1.74
LRCH3-212ENST00000466845 MPV17LQ2QL34 196 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 MIC13Q5XKP0 118 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 Q6ZQT7 251 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF584Q8IVC4 421 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 AMN1Q8IY45 258 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 C15orf53Q8NAA6 179 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 OR10G2Q8NGC3 310 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 TMEM243Q9BU79 118 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 CHAC1Q9BUX1 264 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 FXYD6Q9H0Q3 95 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 MOB4Q9Y3A3 225 aa4.17□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF706Q9Y5V0 76 aaPredicted RBP4.17□□□□□ -1.74
LRCH3-212ENST00000466845 NXPH4O95158 308 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 HLA-DQA1P01909 254 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 C1QAP02745 245 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF823P16415 610 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 SSR2P43308 183 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 CSN1S1P47710 185 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 FUT5Q11128 374 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 TMEM155Q4W5P6 130 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 LAIR2Q6ISS4 152 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 MDP1Q86V88 176 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 C17orf82Q86X59 251 aaPredicted RBP4.16□□□□□ -1.74
LRCH3-212ENST00000466845 GPHB5Q86YW7 130 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.16□□□□□ -1.74
LRCH3-212ENST00000466845 GTSF1Q8WW33 167 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 GEMIN6Q8WXD5 167 aaKnown RBP4.16□□□□□ -1.74
LRCH3-212ENST00000466845 ZNF286AQ9HBT8 521 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 FAM186AA6NE01 2351 aa4.16□□□□□ -1.74
LRCH3-212ENST00000466845 COL4A2P08572 1712 aa4.15□□□□□ -1.74
LRCH3-212ENST00000466845 POLEQ07864 2286 aa4.15□□□□□ -1.74
LRCH3-212ENST00000466845 RIF1Q5UIP0 2472 aaKnown RBP4.15□□□□□ -1.74
LRCH3-212ENST00000466845 PTPRZ1P23471 2315 aaPredicted RBP4.15□□□□□ -1.74
LRCH3-212ENST00000466845 IGKV1-9A0A0C4DH69 117 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 hADV29S1A0JD25 119 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 BMPR1BO00238 502 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 HCRTO43612 131 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 NUPR1O60356 82 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 COX7A2P2O60397 106 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 HBDP02042 147 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 HMGA1P17096 107 aaKnown RBP4.15□□□□□ -1.75
LRCH3-212ENST00000466845 LMO2P25791 158 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 DYNLT3P51808 116 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 UBE2BP63146 152 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 REG3AQ06141 175 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 LPAL2Q16609 132 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms