RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ZNF833PQ6ZTB9 187 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 ZNF581Q9P0T4 197 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 IGKV1-39P01597 117 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 IGKV1D-39P04432 117 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 RPL18AQ02543 176 aaKnown RBP6.97□□□□□ -1.29
HPS4-209ENST00000466781 ZNRD1Q9P1U0 126 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 hADV29S1A0JD25 119 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 MLANAQ16655 118 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 Q8N8P6 123 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 ATRXP46100 2492 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 UBE2CO00762 179 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 ELANEP08246 267 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 A0A0J9YY99 117 aa6.96□□□□□ -1.29
HPS4-209ENST00000466781 ZNF134P52741 427 aa6.96□□□□□ -1.29
HPS4-209ENST00000466781 HIST3H2BBQ8N257 126 aa6.96□□□□□ -1.29
HPS4-209ENST00000466781 ZNF492Q9P255 531 aa6.96□□□□□ -1.29
HPS4-209ENST00000466781 TMEM213A2RRL7 107 aa6.96□□□□□ -1.3
HPS4-209ENST00000466781 RHOHQ15669 191 aa6.96□□□□□ -1.3
HPS4-209ENST00000466781 Q9HAA7 133 aa6.96□□□□□ -1.3
HPS4-209ENST00000466781 KLF2Q9Y5W3 355 aaPredicted RBP6.96□□□□□ -1.3
HPS4-209ENST00000466781 IGHV7-4-1A0A0J9YVY3 117 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 HERVK_113P63121 156 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 C2orf66Q6UXQ4 117 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 HAMPP81172 84 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 ASXL3Q9C0F0 2248 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 KNL1Q8NG31 2342 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 TRAV13-2A0A0B4J235 113 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 Q6ZS49 121 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 PRORYQ9H606 182 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 C3orf79P0CE67 100 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 WT1P19544 449 aaPredicted RBP6.95□□□□□ -1.3
HPS4-209ENST00000466781 FAM120AOSQ5T036 256 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 FOXL2NBQ6ZUU3 175 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 PROK2Q9HC23 129 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 LMO1P25800 156 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 DEFB105AQ8NG35 78 aa6.95□□□□□ -1.3
HPS4-209ENST00000466781 A0A1B0GUS0 222 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 SDHAF1A6NFY7 115 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 K7EM74 188 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 TEX36Q5VZQ5 186 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 NOP10Q9NPE3 64 aaKnown RBP6.94□□□□□ -1.3
HPS4-209ENST00000466781 CYTL1Q9NRR1 136 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 H3BRN7 92 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 CCL24O00175 119 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 NDUFA4L2Q9NRX3 87 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 TRAV26-2A0A0B4J265 109 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 H3BUA1 57 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 TIRAPP58753 221 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 SRSF2Q01130 221 aaKnown RBP6.94□□□□□ -1.3
HPS4-209ENST00000466781 DEFB113Q30KQ7 82 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 Q6ZQT7 251 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 VPREB3Q9UKI3 123 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 COX11Q9Y6N1 276 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 TRBV19A0A075B6N1 114 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 SLX1AQ9BQ83 275 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 SPINK8P0C7L1 97 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 UTF1Q5T230 341 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 ATP6V0BQ99437 205 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 C1orf43Q9BWL3 253 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 TMEM14BQ9NUH8 114 aa6.94□□□□□ -1.3
HPS4-209ENST00000466781 IGHG4P01861 327 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 CCL18P55774 89 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 FOXI2Q6ZQN5 318 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 MDC1Q14676 2089 aaKnown RBP6.93□□□□□ -1.3
HPS4-209ENST00000466781 HOXB4P17483 251 aaPredicted RBP6.93□□□□□ -1.3
HPS4-209ENST00000466781 ZNF503Q96F45 646 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 IGLV2-23P01705 113 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 CFPP27918 469 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 FAM215AQ9Y5M1 114 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 XCL1P47992 114 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 ADAMTSL5Q6ZMM2 481 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 MRPL53Q96EL3 112 aaKnown RBP6.93□□□□□ -1.3
HPS4-209ENST00000466781 ICOSQ9Y6W8 199 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 FAM104BQ5XKR9 115 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 LINC00479Q96M42 142 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 NDUFA12Q9UI09 145 aa6.93□□□□□ -1.3
HPS4-209ENST00000466781 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 IGFL2Q6UWQ7 119 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 A0A0G2JRQ6 117 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 DEFB112Q30KQ8 113 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 OR11H6Q8NGC7 330 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 ETDCA0A1B0GVM5 59 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 BUB3O43684 328 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 CRYGCP07315 174 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 LOXP28300 417 aaPredicted RBP6.92□□□□□ -1.3
HPS4-209ENST00000466781 C17orf58Q2M2W7 97 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 STPG4Q8N801 248 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 CHKB-CPT1BH3BT56 60 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 MPV17L2Q567V2 206 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 TRAV12-1A0A0B4J245 112 aa6.92□□□□□ -1.3
HPS4-209ENST00000466781 F8W735 103 aaPredicted RBP6.92□□□□□ -1.3
HPS4-209ENST00000466781 COL4A3Q01955 1670 aa6.91□□□□□ -1.3
HPS4-209ENST00000466781 QRFPP83859 136 aa6.91□□□□□ -1.3
HPS4-209ENST00000466781 MRPL51Q4U2R6 128 aaKnown RBP6.91□□□□□ -1.3
HPS4-209ENST00000466781 MORN5Q5VZ52 161 aa6.91□□□□□ -1.3
HPS4-209ENST00000466781 LINC00311Q8N616 119 aa6.91□□□□□ -1.3
HPS4-209ENST00000466781 FAM231BA6NCW3 169 aa6.91□□□□□ -1.3
HPS4-209ENST00000466781 GP9P14770 177 aa6.91□□□□□ -1.3
HPS4-209ENST00000466781 TMEM14CQ9P0S9 112 aa6.91□□□□□ -1.3
HPS4-209ENST00000466781 KLK5Q9Y337 293 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms