RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 MPDU1O75352 247 aa13.27□□□□□ -0.29
COL9A3-206ENST00000466532 PDE6HQ13956 83 aa13.27□□□□□ -0.29
COL9A3-206ENST00000466532 EXOC3-AS1Q8N2X6 119 aa13.27□□□□□ -0.29
COL9A3-206ENST00000466532 ZNF680Q8NEM1 530 aa13.27□□□□□ -0.29
COL9A3-206ENST00000466532 BLNKQ8WV28 456 aa13.27□□□□□ -0.29
COL9A3-206ENST00000466532 LINC00477Q96M19 166 aa13.27□□□□□ -0.29
COL9A3-206ENST00000466532 UPK3BQ9BT76 320 aa13.27□□□□□ -0.29
COL9A3-206ENST00000466532 KRTAP1-5Q9BYS1 174 aa13.27□□□□□ -0.29
COL9A3-206ENST00000466532 GSN-AS1Q9NRJ2 163 aa13.27□□□□□ -0.29
COL9A3-206ENST00000466532 NDUFA13Q9P0J0 144 aa13.27□□□□□ -0.29
COL9A3-206ENST00000466532 TRGV2A0A075B6R0 118 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 KLLNB2CW77 178 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 CD300CQ08708 224 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 BTN1A1Q13410 526 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 GCSAMLQ5JQS6 135 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 C11orf72Q8NBR9 251 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 FAM19A4Q96LR4 140 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 NPCDR1Q9BY65 106 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 KRTAP4-5Q9BYR2 181 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 AGPAT4-IT1Q9H0P7 198 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 Q9H3A6 140 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 AAMDCQ9H7C9 122 aa13.26□□□□□ -0.29
COL9A3-206ENST00000466532 RNASE4P34096 147 aaKnown RBP13.25□□□□□ -0.29
COL9A3-206ENST00000466532 EIF4E3Q8N5X7 224 aaKnown RBP13.25□□□□□ -0.29
COL9A3-206ENST00000466532 SLC25A2Q9BXI2 301 aa13.25□□□□□ -0.29
COL9A3-206ENST00000466532 MRPS16Q9Y3D3 137 aaKnown RBP13.25□□□□□ -0.29
COL9A3-206ENST00000466532 TRGV1A0A0A0MS02 117 aa13.24□□□□□ -0.29
COL9A3-206ENST00000466532 ZNF324O75467 553 aaPredicted RBP13.24□□□□□ -0.29
COL9A3-206ENST00000466532 CDK2AP2O75956 126 aa13.24□□□□□ -0.29
COL9A3-206ENST00000466532 NHLH2Q02577 135 aa13.24□□□□□ -0.29
COL9A3-206ENST00000466532 ICAM4Q14773 271 aa13.24□□□□□ -0.29
COL9A3-206ENST00000466532 MZT2BQ6NZ67 158 aa13.24□□□□□ -0.29
COL9A3-206ENST00000466532 THAP6Q8TBB0 222 aa13.24□□□□□ -0.29
COL9A3-206ENST00000466532 LINC00467Q9BRT7 94 aa13.24□□□□□ -0.29
COL9A3-206ENST00000466532 GPX1P07203 203 aa13.23□□□□□ -0.29
COL9A3-206ENST00000466532 ANXA2RQ3ZCQ2 193 aa13.23□□□□□ -0.29
COL9A3-206ENST00000466532 FAM122CQ6P4D5 195 aa13.23□□□□□ -0.29
COL9A3-206ENST00000466532 C9orf47Q6ZRZ4 202 aa13.23□□□□□ -0.29
COL9A3-206ENST00000466532 MIR17HGQ75NE6 70 aa13.23□□□□□ -0.29
COL9A3-206ENST00000466532 SPATA12Q7Z6I5 190 aa13.23□□□□□ -0.29
COL9A3-206ENST00000466532 OR5C1Q8NGR4 320 aa13.23□□□□□ -0.29
COL9A3-206ENST00000466532 VSIG2Q96IQ7 327 aa13.23□□□□□ -0.29
COL9A3-206ENST00000466532 C18orf15Q96N68 181 aa13.23□□□□□ -0.29
COL9A3-206ENST00000466532 FUT9Q9Y231 359 aa13.23□□□□□ -0.29
COL9A3-206ENST00000466532 IGKV2-40A0A087WW87 121 aaPredicted RBP13.22□□□□□ -0.29
COL9A3-206ENST00000466532 A0A096LPF7 62 aa13.22□□□□□ -0.29
COL9A3-206ENST00000466532 A0A1W2PPQ1 181 aa13.22□□□□□ -0.29
COL9A3-206ENST00000466532 IGKV2D-40P01614 121 aaPredicted RBP13.22□□□□□ -0.29
COL9A3-206ENST00000466532 CRISP2P16562 243 aa13.22□□□□□ -0.29
COL9A3-206ENST00000466532 TMEM78Q5T7P6 136 aa13.22□□□□□ -0.29
COL9A3-206ENST00000466532 FAM167A-AS1Q96KT0 104 aa13.22□□□□□ -0.29
COL9A3-206ENST00000466532 KLF12Q9Y4X4 402 aa13.22□□□□□ -0.29
COL9A3-206ENST00000466532 APOBP04114 4563 aaKnown RBP13.21□□□□□ -0.29
COL9A3-206ENST00000466532 RGS13O14921 159 aa13.21□□□□□ -0.29
COL9A3-206ENST00000466532 SPINK4O60575 86 aa13.21□□□□□ -0.29
COL9A3-206ENST00000466532 SIX6O95475 246 aa13.21□□□□□ -0.29
COL9A3-206ENST00000466532 TCL1AP56279 114 aa13.21□□□□□ -0.29
COL9A3-206ENST00000466532 VGLL1Q99990 258 aa13.21□□□□□ -0.29
COL9A3-206ENST00000466532 SLC25A31Q9H0C2 315 aa13.21□□□□□ -0.29
COL9A3-206ENST00000466532 OR51M1Q9H341 326 aa13.21□□□□□ -0.29
COL9A3-206ENST00000466532 E5RGE8 158 aa13.2□□□□□ -0.3
COL9A3-206ENST00000466532 NMBP08949 121 aa13.2□□□□□ -0.3
COL9A3-206ENST00000466532 NBEAP1P0C6P0 100 aa13.2□□□□□ -0.3
COL9A3-206ENST00000466532 ASAH1Q13510 395 aa13.2□□□□□ -0.3
COL9A3-206ENST00000466532 PRR9Q5T870 116 aa13.2□□□□□ -0.3
COL9A3-206ENST00000466532 ZFAND2AQ8N6M9 145 aa13.2□□□□□ -0.3
COL9A3-206ENST00000466532 MAPKAPK5-AS1Q8N8E1 139 aa13.2□□□□□ -0.3
COL9A3-206ENST00000466532 OR5AC2Q9NZP5 309 aa13.2□□□□□ -0.3
COL9A3-206ENST00000466532 ZNF492Q9P255 531 aa13.2□□□□□ -0.3
COL9A3-206ENST00000466532 TP53TG3Q9ULZ0 132 aa13.2□□□□□ -0.3
COL9A3-206ENST00000466532 DNAH5Q8TE73 4624 aa13.2□□□□□ -0.3
COL9A3-206ENST00000466532 LRRC37A5PQ49AS3 106 aa13.19□□□□□ -0.3
COL9A3-206ENST00000466532 IBA57Q5T440 356 aaKnown RBP13.19□□□□□ -0.3
COL9A3-206ENST00000466532 Q6ZQT7 251 aa13.19□□□□□ -0.3
COL9A3-206ENST00000466532 MRPL32Q9BYC8 188 aaKnown RBP13.19□□□□□ -0.3
COL9A3-206ENST00000466532 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
COL9A3-206ENST00000466532 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
COL9A3-206ENST00000466532 OR10J4P0C629 311 aa13.18□□□□□ -0.3
COL9A3-206ENST00000466532 BTF3P20290 206 aaKnown RBP13.18□□□□□ -0.3
COL9A3-206ENST00000466532 LINC00299Q6ZSB3 139 aa13.18□□□□□ -0.3
COL9A3-206ENST00000466532 ENKURQ8TC29 256 aa13.18□□□□□ -0.3
COL9A3-206ENST00000466532 FXYD5Q96DB9 178 aa13.18□□□□□ -0.3
COL9A3-206ENST00000466532 ARPC5LQ9BPX5 153 aa13.18□□□□□ -0.3
COL9A3-206ENST00000466532 PAXXQ9BUH6 204 aa13.18□□□□□ -0.3
COL9A3-206ENST00000466532 NMES1Q9C002 83 aa13.18□□□□□ -0.3
COL9A3-206ENST00000466532 WDR61Q9GZS3 305 aaKnown RBP13.18□□□□□ -0.3
COL9A3-206ENST00000466532 MRPL16Q9NX20 251 aaKnown RBP13.18□□□□□ -0.3
COL9A3-206ENST00000466532 IGHV3-53P01767 116 aa13.17□□□□□ -0.3
COL9A3-206ENST00000466532 ZNF138P52744 262 aa13.17□□□□□ -0.3
COL9A3-206ENST00000466532 S100ZQ8WXG8 99 aa13.17□□□□□ -0.3
COL9A3-206ENST00000466532 PHYHIPLQ96FC7 376 aa13.17□□□□□ -0.3
COL9A3-206ENST00000466532 ST6GAL2Q96JF0 529 aa13.17□□□□□ -0.3
COL9A3-206ENST00000466532 H0YIZ8 118 aa13.16□□□□□ -0.3
COL9A3-206ENST00000466532 PAX4O43316 350 aa13.16□□□□□ -0.3
COL9A3-206ENST00000466532 Q8TAT8 98 aa13.16□□□□□ -0.3
COL9A3-206ENST00000466532 ICOSQ9Y6W8 199 aa13.16□□□□□ -0.3
COL9A3-206ENST00000466532 C17orf112F2Z3M2 114 aa13.15□□□□□ -0.3
COL9A3-206ENST00000466532 SIVA1O15304 175 aa13.15□□□□□ -0.3
COL9A3-206ENST00000466532 OR7C2O60412 319 aa13.15□□□□□ -0.3
COL9A3-206ENST00000466532 LINC00315P59091 139 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms