RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 ZNF503Q96F45 646 aa12.02□□□□□ -0.49
TOM1-213ENST00000465529 FAM19A4Q96LR4 140 aa12.02□□□□□ -0.49
TOM1-213ENST00000465529 VGLL1Q99990 258 aa12.02□□□□□ -0.49
TOM1-213ENST00000465529 PAXXQ9BUH6 204 aa12.02□□□□□ -0.49
TOM1-213ENST00000465529 FUT9Q9Y231 359 aa12.02□□□□□ -0.49
TOM1-213ENST00000465529 DYNC1H1Q14204 4646 aaKnown RBP12.01□□□□□ -0.49
TOM1-213ENST00000465529 A0A1B0GVY2 172 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 GAGE12BA1L429 117 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 C7orf71A4D174 169 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 GAGE7O76087 117 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 NBEAP1P0C6P0 100 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 GAGE12FP0CL80 117 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 GAGE12GP0CL81 117 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 GAGE12IP0CL82 117 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 RPL12P30050 165 aaKnown RBP12.01□□□□□ -0.49
TOM1-213ENST00000465529 LGALS9BQ3B8N2 356 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 RNF212Q495C1 297 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 FFAR4Q5NUL3 377 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 CCDC28AQ8IWP9 274 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 LINC00612Q8N6U2 182 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 RNF141Q8WVD5 230 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 MRPL32Q9BYC8 188 aaKnown RBP12.01□□□□□ -0.49
TOM1-213ENST00000465529 WFDC1Q9HC57 220 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 PRELID1Q9Y255 219 aa12.01□□□□□ -0.49
TOM1-213ENST00000465529 PKD1P98161 4303 aa12□□□□□ -0.49
TOM1-213ENST00000465529 KLLNB2CW77 178 aa12□□□□□ -0.49
TOM1-213ENST00000465529 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
TOM1-213ENST00000465529 ALG5Q9Y673 324 aa12□□□□□ -0.49
TOM1-213ENST00000465529 PKHD1P08F94 4074 aa12□□□□□ -0.49
TOM1-213ENST00000465529 PRSS29PA6NIE9 313 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 SNURFLB1AK76 121 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 C17orf112F2Z3M2 114 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 OR7C2O60412 319 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 ZNF324O75467 553 aaPredicted RBP11.99□□□□□ -0.49
TOM1-213ENST00000465529 SLC25A5P05141 298 aaKnown RBP11.99□□□□□ -0.49
TOM1-213ENST00000465529 HOXA5P20719 270 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 RNASE4P34096 147 aaKnown RBP11.99□□□□□ -0.49
TOM1-213ENST00000465529 C9orf47Q6ZRZ4 202 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 Q6ZTI0 123 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 LINC00336Q6ZUF6 198 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 Q8TAT8 98 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 LINC00477Q96M19 166 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 PYGO2Q9BRQ0 406 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 ATG101Q9BSB4 218 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 KCNIP2Q9NS61 270 aa11.99□□□□□ -0.49
TOM1-213ENST00000465529 A0A0J9YY99 117 aa11.98□□□□□ -0.49
TOM1-213ENST00000465529 PET100P0DJ07 73 aa11.98□□□□□ -0.49
TOM1-213ENST00000465529 OR5I1Q13606 314 aa11.98□□□□□ -0.49
TOM1-213ENST00000465529 ZFAND2AQ8N6M9 145 aa11.98□□□□□ -0.49
TOM1-213ENST00000465529 C11orf72Q8NBR9 251 aa11.98□□□□□ -0.49
TOM1-213ENST00000465529 TMPRSS5Q9H3S3 457 aa11.98□□□□□ -0.49
TOM1-213ENST00000465529 GSN-AS1Q9NRJ2 163 aa11.98□□□□□ -0.49
TOM1-213ENST00000465529 DNAH11Q96DT5 4516 aa11.97□□□□□ -0.49
TOM1-213ENST00000465529 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
TOM1-213ENST00000465529 CRISP2P16562 243 aa11.97□□□□□ -0.49
TOM1-213ENST00000465529 UBE2L3P68036 154 aaKnown RBP11.97□□□□□ -0.49
TOM1-213ENST00000465529 BATF3Q9NR55 127 aa11.97□□□□□ -0.49
TOM1-213ENST00000465529 ZNF492Q9P255 531 aa11.97□□□□□ -0.49
TOM1-213ENST00000465529 TP53TG3Q9ULZ0 132 aa11.97□□□□□ -0.49
TOM1-213ENST00000465529 LINC00588Q9Y4M8 146 aa11.97□□□□□ -0.49
TOM1-213ENST00000465529 IFNA5P01569 189 aa11.96□□□□□ -0.49
TOM1-213ENST00000465529 GPX1P07203 203 aa11.96□□□□□ -0.49
TOM1-213ENST00000465529 RANP62826 216 aaKnown RBP11.96□□□□□ -0.49
TOM1-213ENST00000465529 TMEM78Q5T7P6 136 aa11.96□□□□□ -0.49
TOM1-213ENST00000465529 ZNRF2Q8NHG8 242 aa11.96□□□□□ -0.49
TOM1-213ENST00000465529 SCGB1C1Q8TD33 95 aa11.96□□□□□ -0.49
TOM1-213ENST00000465529 Q9H3A6 140 aa11.96□□□□□ -0.49
TOM1-213ENST00000465529 KLF12Q9Y4X4 402 aa11.96□□□□□ -0.49
TOM1-213ENST00000465529 EIF4E3Q8N5X7 224 aaKnown RBP11.95□□□□□ -0.5
TOM1-213ENST00000465529 RAB2AP61019 212 aa11.94□□□□□ -0.5
TOM1-213ENST00000465529 DAZ2Q13117 558 aaKnown RBP11.94□□□□□ -0.5
TOM1-213ENST00000465529 GNPNAT1Q96EK6 184 aaPredicted RBP11.94□□□□□ -0.5
TOM1-213ENST00000465529 TRGV1A0A0A0MS02 117 aa11.93□□□□□ -0.5
TOM1-213ENST00000465529 HMGB3O15347 200 aaKnown RBP11.93□□□□□ -0.5
TOM1-213ENST00000465529 M6PRP20645 277 aa11.93□□□□□ -0.5
TOM1-213ENST00000465529 ZNF138P52744 262 aa11.93□□□□□ -0.5
TOM1-213ENST00000465529 ANXA2RQ3ZCQ2 193 aa11.93□□□□□ -0.5
TOM1-213ENST00000465529 KHDC3LQ587J8 217 aa11.93□□□□□ -0.5
TOM1-213ENST00000465529 ZNF680Q8NEM1 530 aa11.93□□□□□ -0.5
TOM1-213ENST00000465529 LINC00467Q9BRT7 94 aa11.93□□□□□ -0.5
TOM1-213ENST00000465529 RGS13O14921 159 aa11.92□□□□□ -0.5
TOM1-213ENST00000465529 Q5BKY6 102 aa11.92□□□□□ -0.5
TOM1-213ENST00000465529 SSX7Q7RTT5 188 aa11.92□□□□□ -0.5
TOM1-213ENST00000465529 RXFP4Q8TDU9 374 aa11.92□□□□□ -0.5
TOM1-213ENST00000465529 HYLS1Q96M11 299 aa11.92□□□□□ -0.5
TOM1-213ENST00000465529 MRPL16Q9NX20 251 aaKnown RBP11.92□□□□□ -0.5
TOM1-213ENST00000465529 RPH3ALQ9UNE2 315 aa11.92□□□□□ -0.5
TOM1-213ENST00000465529 MUC4Q99102 2169 aa11.91□□□□□ -0.5
TOM1-213ENST00000465529 TRGV2A0A075B6R0 118 aa11.91□□□□□ -0.5
TOM1-213ENST00000465529 IGHV1OR15-1A0A075B7D0 117 aa11.91□□□□□ -0.5
TOM1-213ENST00000465529 NBDYA0A0U1RRE5 68 aa11.91□□□□□ -0.5
TOM1-213ENST00000465529 DIRC3C9JPN6 131 aa11.91□□□□□ -0.5
TOM1-213ENST00000465529 CSN1S1P47710 185 aa11.91□□□□□ -0.5
TOM1-213ENST00000465529 CCL18P55774 89 aa11.91□□□□□ -0.5
TOM1-213ENST00000465529 TCL1AP56279 114 aa11.91□□□□□ -0.5
TOM1-213ENST00000465529 FAM3BP58499 235 aaPredicted RBP11.91□□□□□ -0.5
TOM1-213ENST00000465529 MUC21Q5SSG8 566 aa11.91□□□□□ -0.5
TOM1-213ENST00000465529 C1orf134Q5TEV5 83 aa11.91□□□□□ -0.5
TOM1-213ENST00000465529 SPINK4O60575 86 aa11.9□□□□□ -0.5
TOM1-213ENST00000465529 PTTG1O95997 202 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms