RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 GUK1Q16774 197 aa6.67□□□□□ -1.34
USP39-212ENST00000465514 MIC13Q5XKP0 118 aa6.67□□□□□ -1.34
USP39-212ENST00000465514 Q6ZRG5 221 aa6.67□□□□□ -1.34
USP39-212ENST00000465514 NRARPQ7Z6K4 114 aa6.67□□□□□ -1.34
USP39-212ENST00000465514 VSIG2Q96IQ7 327 aa6.67□□□□□ -1.34
USP39-212ENST00000465514 SDHCQ99643 169 aaPredicted RBP6.67□□□□□ -1.34
USP39-212ENST00000465514 PYGO2Q9BRQ0 406 aa6.67□□□□□ -1.34
USP39-212ENST00000465514 LSM5Q9Y4Y9 91 aaKnown RBP6.67□□□□□ -1.34
USP39-212ENST00000465514 TRGV2A0A075B6R0 118 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 A0A096LPF7 62 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 CCSO14618 274 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 EREGO14944 169 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 CST7O76096 145 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 CAV2P51636 162 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 LINC00315P59091 139 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 ERVFC1-1P60608 527 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 ERCC8Q13216 396 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 ZNF846Q147U1 533 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
USP39-212ENST00000465514 OR1L4Q8NGR5 311 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 RBM38Q9H0Z9 239 aaKnown RBP6.66□□□□□ -1.34
USP39-212ENST00000465514 GSN-AS1Q9NRJ2 163 aa6.66□□□□□ -1.34
USP39-212ENST00000465514 TRGV1A0A0A0MS02 117 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 C7orf71A4D174 169 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 FAM24AA6NFZ4 105 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 FAM25EA8MYX2 175 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 M0R3E3 92 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 ZNF253O75346 499 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 SLC25A5P05141 298 aaKnown RBP6.65□□□□□ -1.34
USP39-212ENST00000465514 RNASE4P34096 147 aaKnown RBP6.65□□□□□ -1.34
USP39-212ENST00000465514 CNPY1Q3B7I2 92 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 C11orf72Q8NBR9 251 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 ZNF680Q8NEM1 530 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 PFDN5Q99471 154 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 C11orf1Q9H5F2 150 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 SLC39A9Q9NUM3 307 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 UQCC1Q9NVA1 299 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 FUT9Q9Y231 359 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 WDR83OSQ9Y284 106 aa6.65□□□□□ -1.34
USP39-212ENST00000465514 LRP2P98164 4655 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 FAT3Q8TDW7 4589 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 TRBV19A0A075B6N1 114 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 C5orf51A6NDU8 294 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 KLLNB2CW77 178 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 ZNF324O75467 553 aaPredicted RBP6.64□□□□□ -1.35
USP39-212ENST00000465514 NDUFB4O95168 129 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 DNAH10OSP0CZ25 163 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 IL7P13232 177 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 RPL29P47914 159 aaKnown RBP6.64□□□□□ -1.35
USP39-212ENST00000465514 CD300CQ08708 224 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 BTN1A1Q13410 526 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 VWC2Q2TAL6 325 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 C12orf45Q8N5I9 185 aaPredicted RBP6.64□□□□□ -1.35
USP39-212ENST00000465514 EIF4E3Q8N5X7 224 aaKnown RBP6.64□□□□□ -1.35
USP39-212ENST00000465514 DEFB104AQ8WTQ1 72 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 MRPL53Q96EL3 112 aaKnown RBP6.64□□□□□ -1.35
USP39-212ENST00000465514 FAM19A4Q96LR4 140 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 LINC00477Q96M19 166 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 LINC00467Q9BRT7 94 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 AGPAT4-IT1Q9H0P7 198 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 C20orf85Q9H1P6 137 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 KLF12Q9Y4X4 402 aa6.64□□□□□ -1.35
USP39-212ENST00000465514 UBE2L5PA0A1B0GUS4 154 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 SIVA1O15304 175 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 PLA2G10O15496 165 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 SPINK4O60575 86 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 PLA2G1BP04054 148 aaKnown RBP6.63□□□□□ -1.35
USP39-212ENST00000465514 PYYP10082 97 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 HIST1H1EP10412 219 aaKnown RBP6.63□□□□□ -1.35
USP39-212ENST00000465514 GCSHP23434 173 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 S100A11P31949 105 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 SULT1A1P50225 295 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 BAXQ07812 192 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 ANXA2RQ3ZCQ2 193 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 EXOC3-AS1Q8N2X6 119 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 C2orf50Q96LR7 162 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 TMEM14CQ9P0S9 112 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 PRELID1Q9Y255 219 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 TIMM9Q9Y5J7 89 aa6.63□□□□□ -1.35
USP39-212ENST00000465514 TRAV6A0A075B6T7 132 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 IGSF23A1L1A6 192 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 PAX4O43316 350 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 MPDU1O75352 247 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 NXPH4O95158 308 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 IGHV3-53P01767 116 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 TCRBP04435 133 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 GPX1P07203 203 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 CRISP2P16562 243 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 PVALBP20472 110 aaPredicted RBP6.62□□□□□ -1.35
USP39-212ENST00000465514 FGF7P21781 194 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 TCL1AP56279 114 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 S100A10P60903 97 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 C9orf47Q6ZRZ4 202 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 CHAC2Q8WUX2 184 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 BLNKQ8WV28 456 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 SEC22CQ9BRL7 303 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 LYRM2Q9NU23 88 aaPredicted RBP6.62□□□□□ -1.35
USP39-212ENST00000465514 TP53TG3Q9ULZ0 132 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 TNFRSF18Q9Y5U5 241 aa6.62□□□□□ -1.35
USP39-212ENST00000465514 ICOSQ9Y6W8 199 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms