RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 IGHV3OR16-12A0A075B7B8 117 aa14.63□□□□□ -0.07
SKA3-205ENST00000465471 PGPA6NDG6 321 aa14.63□□□□□ -0.07
SKA3-205ENST00000465471 UMAD1C9J7I0 102 aa14.63□□□□□ -0.07
SKA3-205ENST00000465471 DIRC3C9JPN6 131 aa14.63□□□□□ -0.07
SKA3-205ENST00000465471 LEPP41159 167 aa14.63□□□□□ -0.07
SKA3-205ENST00000465471 CSN1S1P47710 185 aa14.63□□□□□ -0.07
SKA3-205ENST00000465471 GFI1BQ5VTD9 330 aa14.63□□□□□ -0.07
SKA3-205ENST00000465471 C9orf62Q8N4C0 152 aa14.63□□□□□ -0.07
SKA3-205ENST00000465471 KLLNB2CW77 178 aa14.62□□□□□ -0.07
SKA3-205ENST00000465471 CRISP2P16562 243 aa14.62□□□□□ -0.07
SKA3-205ENST00000465471 FHITP49789 147 aa14.62□□□□□ -0.07
SKA3-205ENST00000465471 FAM74A1Q5RGS3 127 aa14.62□□□□□ -0.07
SKA3-205ENST00000465471 TMEM256Q8N2U0 113 aa14.62□□□□□ -0.07
SKA3-205ENST00000465471 C20orf144Q9BQM9 153 aa14.62□□□□□ -0.07
SKA3-205ENST00000465471 DYNC2H1Q8NCM8 4307 aaKnown RBP14.61□□□□□ -0.07
SKA3-205ENST00000465471 TRBV7-9A0A0J9YWB2 115 aa14.61□□□□□ -0.07
SKA3-205ENST00000465471 MAP1LC3B2A6NCE7 125 aa14.61□□□□□ -0.07
SKA3-205ENST00000465471 NMBP08949 121 aa14.61□□□□□ -0.07
SKA3-205ENST00000465471 ZFP69Q49AA0 526 aa14.61□□□□□ -0.07
SKA3-205ENST00000465471 TMEM78Q5T7P6 136 aa14.61□□□□□ -0.07
SKA3-205ENST00000465471 TMED6Q8WW62 240 aa14.61□□□□□ -0.07
SKA3-205ENST00000465471 MAP1LC3BQ9GZQ8 125 aa14.61□□□□□ -0.07
SKA3-205ENST00000465471 ZNF492Q9P255 531 aa14.61□□□□□ -0.07
SKA3-205ENST00000465471 A0A1W2PRE2 83 aa14.6□□□□□ -0.07
SKA3-205ENST00000465471 GGTLC3B5MD39 225 aa14.6□□□□□ -0.07
SKA3-205ENST00000465471 HBE1P02100 147 aa14.6□□□□□ -0.07
SKA3-205ENST00000465471 FGF8P55075 233 aaPredicted RBP14.6□□□□□ -0.07
SKA3-205ENST00000465471 DPPA3Q6W0C5 159 aa14.6□□□□□ -0.07
SKA3-205ENST00000465471 TMEM208Q9BTX3 173 aa14.6□□□□□ -0.07
SKA3-205ENST00000465471 TMPRSS5Q9H3S3 457 aa14.6□□□□□ -0.07
SKA3-205ENST00000465471 TMEM189A5PLL7 270 aa14.59□□□□□ -0.07
SKA3-205ENST00000465471 ZNF138P52744 262 aa14.59□□□□□ -0.07
SKA3-205ENST00000465471 RRN3P1Q2M238 152 aa14.59□□□□□ -0.07
SKA3-205ENST00000465471 ZFAND6Q6FIF0 208 aa14.59□□□□□ -0.07
SKA3-205ENST00000465471 SLC51BQ86UW2 128 aa14.59□□□□□ -0.07
SKA3-205ENST00000465471 ZFAND2AQ8N6M9 145 aa14.59□□□□□ -0.07
SKA3-205ENST00000465471 C5orf17Q8NAS9 161 aa14.59□□□□□ -0.07
SKA3-205ENST00000465471 C11orf45Q8TAV5 145 aa14.59□□□□□ -0.07
SKA3-205ENST00000465471 CMTM2Q8TAZ6 248 aa14.59□□□□□ -0.07
SKA3-205ENST00000465471 MBD3L1Q8WWY6 194 aa14.59□□□□□ -0.07
SKA3-205ENST00000465471 Q8TAT8 98 aa14.58□□□□□ -0.08
SKA3-205ENST00000465471 CELA1Q9UNI1 258 aa14.58□□□□□ -0.08
SKA3-205ENST00000465471 KMT2CQ8NEZ4 4911 aaKnown RBP14.57□□□□□ -0.08
SKA3-205ENST00000465471 LOC102723971A0A1B0GUV8 181 aa14.57□□□□□ -0.08
SKA3-205ENST00000465471 H7BYZ3 331 aa14.57□□□□□ -0.08
SKA3-205ENST00000465471 TAS2R60P59551 318 aa14.57□□□□□ -0.08
SKA3-205ENST00000465471 NANOS2P60321 138 aaKnown RBP14.57□□□□□ -0.08
SKA3-205ENST00000465471 GNG5P63218 68 aa14.57□□□□□ -0.08
SKA3-205ENST00000465471 GOLT1AQ6ZVE7 132 aa14.57□□□□□ -0.08
SKA3-205ENST00000465471 IQCF2Q8IXL9 164 aa14.57□□□□□ -0.08
SKA3-205ENST00000465471 FAM213BQ8TBF2 198 aa14.57□□□□□ -0.08
SKA3-205ENST00000465471 LINC01587Q99440 93 aa14.57□□□□□ -0.08
SKA3-205ENST00000465471 YTHDF2Q9Y5A9 579 aaKnown RBP14.57□□□□□ -0.08
SKA3-205ENST00000465471 LENEPQ9Y5L5 61 aa14.57□□□□□ -0.08
SKA3-205ENST00000465471 TENM2Q9NT68 2774 aa14.56□□□□□ -0.08
SKA3-205ENST00000465471 SERTM2A0A1B0GWG4 89 aa14.56□□□□□ -0.08
SKA3-205ENST00000465471 C7orf71A4D174 169 aa14.56□□□□□ -0.08
SKA3-205ENST00000465471 ZNF705GA8MUZ8 300 aaPredicted RBP14.56□□□□□ -0.08
SKA3-205ENST00000465471 J3KRW8 73 aa14.56□□□□□ -0.08
SKA3-205ENST00000465471 TCRAP04437 139 aa14.56□□□□□ -0.08
SKA3-205ENST00000465471 PRM2P04554 102 aa14.56□□□□□ -0.08
SKA3-205ENST00000465471 SUMO1P63165 101 aaKnown RBP14.56□□□□□ -0.08
SKA3-205ENST00000465471 PRR9Q5T870 116 aa14.56□□□□□ -0.08
SKA3-205ENST00000465471 EIF5AL1Q6IS14 154 aaKnown RBP14.56□□□□□ -0.08
SKA3-205ENST00000465471 RPH3ALQ9UNE2 315 aa14.56□□□□□ -0.08
SKA3-205ENST00000465471 PLAC8L1A1L4L8 177 aa14.55□□□□□ -0.08
SKA3-205ENST00000465471 FAM74A7A6NL05 159 aa14.55□□□□□ -0.08
SKA3-205ENST00000465471 ZNF324O75467 553 aaPredicted RBP14.55□□□□□ -0.08
SKA3-205ENST00000465471 BTN1A1Q13410 526 aa14.55□□□□□ -0.08
SKA3-205ENST00000465471 EPDR1Q9UM22 224 aa14.55□□□□□ -0.08
SKA3-205ENST00000465471 ARL2-SNX15V9GYD0 113 aa14.55□□□□□ -0.08
SKA3-205ENST00000465471 PLECQ15149 4684 aaKnown RBP14.54□□□□□ -0.08
SKA3-205ENST00000465471 TRAV12-3A0A0B4J271 114 aa14.54□□□□□ -0.08
SKA3-205ENST00000465471 AZU1P20160 251 aa14.54□□□□□ -0.08
SKA3-205ENST00000465471 RAB5CP51148 216 aa14.54□□□□□ -0.08
SKA3-205ENST00000465471 PMS2P11Q13670 270 aa14.54□□□□□ -0.08
SKA3-205ENST00000465471 SFT2D1Q8WV19 159 aa14.54□□□□□ -0.08
SKA3-205ENST00000465471 NKX6-2Q9C056 277 aaPredicted RBP14.54□□□□□ -0.08
SKA3-205ENST00000465471 DKK2Q9UBU2 259 aa14.54□□□□□ -0.08
SKA3-205ENST00000465471 TRAV8-1A0A0A6YYK1 113 aa14.53□□□□□ -0.08
SKA3-205ENST00000465471 CXorf65A6NEN9 183 aa14.53□□□□□ -0.08
SKA3-205ENST00000465471 GPX1P07203 203 aa14.53□□□□□ -0.08
SKA3-205ENST00000465471 SULT1A2P50226 295 aa14.53□□□□□ -0.08
SKA3-205ENST00000465471 UBE2G2P60604 165 aa14.53□□□□□ -0.08
SKA3-205ENST00000465471 RNASE8Q8TDE3 154 aaKnown RBP14.53□□□□□ -0.08
SKA3-205ENST00000465471 LINC00467Q9BRT7 94 aa14.53□□□□□ -0.08
SKA3-205ENST00000465471 NIPSNAP3BQ9BS92 247 aa14.53□□□□□ -0.08
SKA3-205ENST00000465471 TEX48A0A1B0GUV7 120 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 NUPR2A6NF83 97 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 IGLV2-11P01706 119 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 H2AFB1P0C5Y9 115 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 RNASE4P34096 147 aaKnown RBP14.52□□□□□ -0.09
SKA3-205ENST00000465471 EMP1P54849 157 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 C12orf74Q32Q52 190 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 ZNF493Q6ZR52 646 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 CCDC28AQ8IWP9 274 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 CYB561D1Q8N8Q1 229 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 PHLDA1Q8WV24 401 aaPredicted RBP14.52□□□□□ -0.09
SKA3-205ENST00000465471 TVP23CQ96ET8 276 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 C16orf74Q96GX8 76 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms