RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143	CMTM2	Q8TAZ6	248 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	C11orf52	Q96A22	123 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	C16orf92	Q96LL3	132 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	WWC2-AS2	Q96NR7	200 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	RCHY1	Q96PM5	261 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	SPATA25	Q9BR10	227 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	TCEAL7	Q9BRU2	100 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	SLC50A1	Q9BRV3	221 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	DERL1	Q9BUN8	251 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	SEC11C	Q9BY50	192 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	PARL	Q9H300	379 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	AAMDC	Q9H7C9	122 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	NRN1	Q9NPD7	142 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	EPDR1	Q9UM22	224 aa		5.71	□□□□□ -1.5
ITSN1-223	ENST00000465143	DNAH3	Q8TD57	4116 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	ZNF727	A8MUV8	499 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	ZNF705F	A8MVS1	300 aa	Predicted RBP	5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143		M0R3E3	92 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	DNASE2	O00115	360 aa	Predicted RBP	5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	SOCS3	O14543	225 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	EREG	O14944	169 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	TCRA	P04437	139 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	AKR1C3	P42330	323 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	CSN1S1	P47710	185 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	C10orf91	Q5T1B1	145 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	C2CD4C	Q8TF44	421 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	HIST1H2BA	Q96A08	127 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	C20orf173	Q96LM9	149 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	LINC00479	Q96M42	142 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	SMIM7	Q9BQ49	75 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	ATG101	Q9BSB4	218 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	WFDC10A	Q9H1F0	79 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	MS4A6A	Q9H2W1	248 aa		5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	CARHSP1	Q9Y2V2	147 aa	Known RBP	5.7	□□□□□ -1.5
ITSN1-223	ENST00000465143	TRAV34	A0A0B4J273	112 aa		5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	DIRC3	C9JPN6	131 aa		5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	APOC3	P02656	99 aa		5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	RPL35	P42766	123 aa	Known RBP	5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	CNN1	P51911	297 aa	Known RBP	5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	CMC4	P56277	68 aa	Predicted RBP	5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	PSG3	Q16557	428 aa		5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	FAM74A3	Q4VXF1	159 aa		5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	GOLT1A	Q6ZVE7	132 aa		5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	ZNF738	Q8NE65	137 aa		5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	MRPL53	Q96EL3	112 aa	Known RBP	5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	PRELID1	Q9Y255	219 aa		5.69	□□□□□ -1.5
ITSN1-223	ENST00000465143	TRBV20OR9-2	A0A075B6H5	130 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	RBMY1B	A6NDE4	496 aa	Known RBP	5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	RBMY1E	A6NEQ0	496 aa	Known RBP	5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	PRAC2	D3DTV9	90 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143		K7EQG2	157 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143		K7EQM0	130 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	ISLR	O14498	428 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	IGKV2D-40	P01614	121 aa	Predicted RBP	5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	RBMY1D	P0C7P1	496 aa	Known RBP	5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	ID1	P41134	155 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	TMEM183B	Q1AE95	376 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	TMEM241	Q24JQ0	296 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	SAMD13	Q5VXD3	122 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	FAM24B	Q8N5W8	94 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	DCANP1	Q8TF63	244 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	SGK494	Q96LW2	274 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	TM2D3	Q9BRN9	247 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	NIPSNAP3B	Q9BS92	247 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	CLEC5A	Q9NY25	188 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	NAT8	Q9UHE5	227 aa		5.68	□□□□□ -1.5
ITSN1-223	ENST00000465143	SORL1	Q92673	2214 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	TRAV8-1	A0A0A6YYK1	113 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	PGPEP1L	A6NFU8	196 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143		M0R036	132 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	IGLV2-11	P01706	119 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	S100A9	P06702	114 aa	Known RBP	5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	ZNF688	P0C7X2	276 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	GNG4	P50150	75 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	APOC4	P55056	127 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	TAS2R60	P59551	318 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	UBE2G1	P62253	170 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	ERCC8	Q13216	396 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	CENPW	Q5EE01	88 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	SVBP	Q8N300	66 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	ARL6IP6	Q8N6S5	226 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	TMEM75	Q8N9X5	138 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	FMC1	Q96HJ9	113 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	VGLL1	Q99990	258 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	SDF2L1	Q9HCN8	221 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	RETN	Q9HD89	108 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	KLF12	Q9Y4X4	402 aa		5.67	□□□□□ -1.5
ITSN1-223	ENST00000465143	TRAV2	A0A0B4J234	112 aa		5.66	□□□□□ -1.5
ITSN1-223	ENST00000465143	TRBV6-1	A0A0K0K1D8	114 aa		5.66	□□□□□ -1.5
ITSN1-223	ENST00000465143	SERTM2	A0A1B0GWG4	89 aa		5.66	□□□□□ -1.5
ITSN1-223	ENST00000465143	RBAKDN	A6NC62	111 aa		5.66	□□□□□ -1.5
ITSN1-223	ENST00000465143		C9JCJ5	164 aa		5.66	□□□□□ -1.5
ITSN1-223	ENST00000465143	ZNF705D	P0CH99	300 aa	Predicted RBP	5.66	□□□□□ -1.5
ITSN1-223	ENST00000465143	ZNF705B	P0CI00	300 aa	Predicted RBP	5.66	□□□□□ -1.5
ITSN1-223	ENST00000465143	RPL35A	P18077	110 aa	Known RBP	5.66	□□□□□ -1.5
ITSN1-223	ENST00000465143	DEFB1	P60022	68 aa		5.66	□□□□□ -1.5
ITSN1-223	ENST00000465143	SNRPD3	P62318	126 aa	Known RBP	5.66	□□□□□ -1.5
ITSN1-223	ENST00000465143	RPL23	P62829	140 aa	Known RBP	5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 61 ms