RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 TNCP24821 2201 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 CENPVL3A0A0U1RRI6 287 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 ZNF474Q6S9Z5 364 aaPredicted RBP3.04□□□□□ -1.92
CCNL1-204ENST00000464316 COX8CQ7Z4L0 72 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 ANKRD29Q8N6D5 301 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 TMEM101Q96IK0 257 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 CNFNQ9BYD5 112 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 ZNF71Q9NQZ8 489 aaPredicted RBP3.04□□□□□ -1.92
CCNL1-204ENST00000464316 IGHV3-72A0A0B4J1Y9 119 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 E7EUB6 86 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 LGALS1P09382 135 aaKnown RBP3.04□□□□□ -1.92
CCNL1-204ENST00000464316 CCL3L1P16619 93 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 UBE2D3P61077 147 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 UBE2D2P62837 147 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 PAX8Q06710 450 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 C3orf36Q3SXR2 165 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 PRR30Q53SZ7 412 aaPredicted RBP3.04□□□□□ -1.92
CCNL1-204ENST00000464316 MORN3Q6PF18 240 aaPredicted RBP3.04□□□□□ -1.92
CCNL1-204ENST00000464316 NDUFA11Q86Y39 141 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 TDHQ8IZJ6 230 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 ZNF491Q8N8L2 437 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 C15orf53Q8NAA6 179 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 SMIM2Q9BVW6 85 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 KLK15Q9H2R5 256 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 YAE1D1Q9NRH1 226 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 INTS1Q8N201 2190 aaKnown RBP3.04□□□□□ -1.92
CCNL1-204ENST00000464316 KIAA1549Q9HCM3 1950 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 IGKV2-40A0A087WW87 121 aaPredicted RBP3.04□□□□□ -1.92
CCNL1-204ENST00000464316 TRAV17A0A0B4J275 112 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 IGKV1-17P01599 117 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 IGKV2D-40P01614 121 aaPredicted RBP3.04□□□□□ -1.92
CCNL1-204ENST00000464316 UBE2D1P51668 147 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 TEX36Q5VZQ5 186 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 TMEM200BQ69YZ2 307 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 MDS2Q8NDY4 140 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 PTH2Q96A98 100 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 SPRR3Q9UBC9 169 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 SIT1Q9Y3P8 196 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 DOCK7Q96N67 2140 aa3.04□□□□□ -1.92
CCNL1-204ENST00000464316 IGLV3-9A0A075B6K5 115 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 H3BMM0 161 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 IGLV2-23P01705 113 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 WT1P19544 449 aaPredicted RBP3.03□□□□□ -1.92
CCNL1-204ENST00000464316 EMP1P54849 157 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 NFE4Q86UQ8 179 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 UBE2WQ96B02 151 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 RNF185Q96GF1 192 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 C17orf77Q96MU5 243 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 C21orf62Q9NYP8 219 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 SLC25A15Q9Y619 301 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 DNAJC13O75165 2243 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 BRWD1Q9NSI6 2320 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 I3L2K1 104 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 TCL1BO95988 128 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 IGHV1-46P01743 117 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 ACYP1P07311 99 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 CFC1BP0CG36 223 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 CFC1P0CG37 223 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 DLX6P56179 175 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 SUMO2P61956 95 aaKnown RBP3.03□□□□□ -1.92
CCNL1-204ENST00000464316 TMEM155Q4W5P6 130 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 TMEM170BQ5T4T1 132 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 PMS2CLQ68D20 193 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 SHISA2Q6UWI4 295 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 C2orf82Q6UX34 121 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 ZFP2Q6ZN57 461 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 SBSPONQ8IVN8 264 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 NTN5Q8WTR8 489 aaPredicted RBP3.03□□□□□ -1.92
CCNL1-204ENST00000464316 KIR2DL4Q99706 377 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 DKK4Q9UBT3 224 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 IGHV1-69DA0A0B4J2H0 117 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 RBAKDNA6NC62 111 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 CGB1A6NKQ9 187 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 EFNA4P52798 201 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 CCL8P80075 99 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 ANXA2RQ3ZCQ2 193 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 C2orf66Q6UXQ4 117 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 OR13C6PQ8NH95 151 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 CCL17Q92583 94 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 TMEM141Q96I45 108 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 CITED1Q99966 193 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 DYNLRB1Q9NP97 96 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 MSRB1Q9NZV6 116 aa3.03□□□□□ -1.92
CCNL1-204ENST00000464316 PCNX2A6NKB5 2137 aa3.03□□□□□ -1.93
CCNL1-204ENST00000464316 DOCK10Q96BY6 2186 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 EML6Q6ZMW3 1958 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 H7C2G1 150 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 M0R2P5 195 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 TGFAP01135 160 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 IGHG3P01860 377 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 CD59P13987 128 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 GATA3P23771 443 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 FAM159AQ6UWV7 190 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 TOMM6Q96B49 74 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 PLEKHB2Q96CS7 222 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 CARD19Q96LW7 228 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 DPH3P1Q9H4G8 78 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 ZNRD1Q9P1U0 126 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 PHLDA3Q9Y5J5 127 aa3.02□□□□□ -1.93
CCNL1-204ENST00000464316 REV3LO60673 3130 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms