RNA–Protein interactions for RNA: ENST00000464117.1

SHISA4-202, Transcript of shisa family member 4, humanhuman

TSL 2

Gene SHISA4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-202ENST00000464117 GAGE12BA1L429 117 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 H0YIZ8 118 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 GAGE7O76087 117 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 GAGE12FP0CL80 117 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 GAGE12GP0CL81 117 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 GAGE12IP0CL82 117 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 M6PRP20645 277 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 C9orf47Q6ZRZ4 202 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 EXOC3-AS1Q8N2X6 119 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 ZNF680Q8NEM1 530 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 GNPNAT1Q96EK6 184 aaPredicted RBP13.91□□□□□ -0.18
SHISA4-202ENST00000464117 FAM167A-AS1Q96KT0 104 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 LINC00467Q9BRT7 94 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 MRPL32Q9BYC8 188 aaKnown RBP13.91□□□□□ -0.18
SHISA4-202ENST00000464117 WDR61Q9GZS3 305 aaKnown RBP13.91□□□□□ -0.18
SHISA4-202ENST00000464117 AGPAT4-IT1Q9H0P7 198 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 LINC00588Q9Y4M8 146 aa13.91□□□□□ -0.18
SHISA4-202ENST00000464117 TRAV26-1A0A087WT03 109 aa13.9□□□□□ -0.18
SHISA4-202ENST00000464117 NMBP08949 121 aa13.9□□□□□ -0.18
SHISA4-202ENST00000464117 NBEAP1P0C6P0 100 aa13.9□□□□□ -0.18
SHISA4-202ENST00000464117 CRISP2P16562 243 aa13.9□□□□□ -0.18
SHISA4-202ENST00000464117 IFITM3Q01628 133 aa13.9□□□□□ -0.18
SHISA4-202ENST00000464117 ICAM4Q14773 271 aa13.9□□□□□ -0.18
SHISA4-202ENST00000464117 MIR17HGQ75NE6 70 aa13.9□□□□□ -0.18
SHISA4-202ENST00000464117 RXFP4Q8TDU9 374 aa13.9□□□□□ -0.18
SHISA4-202ENST00000464117 OR51M1Q9H341 326 aa13.9□□□□□ -0.18
SHISA4-202ENST00000464117 PTTG2Q9NZH5 202 aa13.9□□□□□ -0.18
SHISA4-202ENST00000464117 A6NHS1 94 aa13.89□□□□□ -0.19
SHISA4-202ENST00000464117 C17orf112F2Z3M2 114 aa13.89□□□□□ -0.19
SHISA4-202ENST00000464117 H3BNG1 76 aa13.89□□□□□ -0.19
SHISA4-202ENST00000464117 ZNF324O75467 553 aaPredicted RBP13.89□□□□□ -0.19
SHISA4-202ENST00000464117 ANXA2RQ3ZCQ2 193 aa13.89□□□□□ -0.19
SHISA4-202ENST00000464117 TMEM78Q5T7P6 136 aa13.89□□□□□ -0.19
SHISA4-202ENST00000464117 MARVELD1Q9BSK0 173 aa13.89□□□□□ -0.19
SHISA4-202ENST00000464117 KRTAP17-1Q9BYP8 105 aa13.89□□□□□ -0.19
SHISA4-202ENST00000464117 PCLOQ9Y6V0 5065 aa13.89□□□□□ -0.19
SHISA4-202ENST00000464117 GPX1P07203 203 aa13.88□□□□□ -0.19
SHISA4-202ENST00000464117 HOXA5P20719 270 aa13.88□□□□□ -0.19
SHISA4-202ENST00000464117 Q6ZTI0 123 aa13.88□□□□□ -0.19
SHISA4-202ENST00000464117 SSX7Q7RTT5 188 aa13.88□□□□□ -0.19
SHISA4-202ENST00000464117 EIF4E3Q8N5X7 224 aaKnown RBP13.88□□□□□ -0.19
SHISA4-202ENST00000464117 PPP1R1CQ8WVI7 109 aa13.88□□□□□ -0.19
SHISA4-202ENST00000464117 C18orf15Q96N68 181 aa13.88□□□□□ -0.19
SHISA4-202ENST00000464117 PAXXQ9BUH6 204 aa13.88□□□□□ -0.19
SHISA4-202ENST00000464117 FUT9Q9Y231 359 aa13.88□□□□□ -0.19
SHISA4-202ENST00000464117 RNASE4P34096 147 aaKnown RBP13.87□□□□□ -0.19
SHISA4-202ENST00000464117 H2BFSP57053 126 aa13.87□□□□□ -0.19
SHISA4-202ENST00000464117 CD300CQ08708 224 aa13.87□□□□□ -0.19
SHISA4-202ENST00000464117 BTN1A1Q13410 526 aa13.87□□□□□ -0.19
SHISA4-202ENST00000464117 FAM122CQ6P4D5 195 aa13.87□□□□□ -0.19
SHISA4-202ENST00000464117 C6orf223Q8N319 242 aa13.87□□□□□ -0.19
SHISA4-202ENST00000464117 C11orf72Q8NBR9 251 aa13.87□□□□□ -0.19
SHISA4-202ENST00000464117 FXYD5Q96DB9 178 aa13.87□□□□□ -0.19
SHISA4-202ENST00000464117 ATP5SQ99766 215 aa13.87□□□□□ -0.19
SHISA4-202ENST00000464117 GSN-AS1Q9NRJ2 163 aa13.87□□□□□ -0.19
SHISA4-202ENST00000464117 IGKV2-40A0A087WW87 121 aaPredicted RBP13.86□□□□□ -0.19
SHISA4-202ENST00000464117 A0A0J9YY99 117 aa13.86□□□□□ -0.19
SHISA4-202ENST00000464117 IGKV2D-40P01614 121 aaPredicted RBP13.86□□□□□ -0.19
SHISA4-202ENST00000464117 PET100P0DJ07 73 aa13.86□□□□□ -0.19
SHISA4-202ENST00000464117 TMPRSS5Q9H3S3 457 aa13.86□□□□□ -0.19
SHISA4-202ENST00000464117 ZNF492Q9P255 531 aa13.86□□□□□ -0.19
SHISA4-202ENST00000464117 TRGV2A0A075B6R0 118 aa13.85□□□□□ -0.19
SHISA4-202ENST00000464117 TRBV7-9A0A0J9YWB2 115 aa13.85□□□□□ -0.19
SHISA4-202ENST00000464117 SSNA1O43805 119 aa13.85□□□□□ -0.19
SHISA4-202ENST00000464117 OR10J4P0C629 311 aa13.85□□□□□ -0.19
SHISA4-202ENST00000464117 DEFA1P59665 94 aa13.85□□□□□ -0.19
SHISA4-202ENST00000464117 DEFA3P59666 94 aa13.85□□□□□ -0.19
SHISA4-202ENST00000464117 ZFAND2AQ8N6M9 145 aa13.85□□□□□ -0.19
SHISA4-202ENST00000464117 VGLL1Q99990 258 aa13.85□□□□□ -0.19
SHISA4-202ENST00000464117 Q9H8V8 135 aa13.85□□□□□ -0.19
SHISA4-202ENST00000464117 HSPB11Q9Y547 144 aa13.85□□□□□ -0.19
SHISA4-202ENST00000464117 RYR1P21817 5038 aa13.84□□□□□ -0.19
SHISA4-202ENST00000464117 OR7C2O60412 319 aa13.84□□□□□ -0.19
SHISA4-202ENST00000464117 MPC2O95563 127 aa13.84□□□□□ -0.19
SHISA4-202ENST00000464117 TCL1AP56279 114 aa13.84□□□□□ -0.19
SHISA4-202ENST00000464117 IBA57Q5T440 356 aaKnown RBP13.84□□□□□ -0.19
SHISA4-202ENST00000464117 LYPD1Q8N2G4 141 aa13.84□□□□□ -0.19
SHISA4-202ENST00000464117 RGS13O14921 159 aa13.83□□□□□ -0.2
SHISA4-202ENST00000464117 CSN1S1P47710 185 aa13.83□□□□□ -0.2
SHISA4-202ENST00000464117 ZNF138P52744 262 aa13.83□□□□□ -0.2
SHISA4-202ENST00000464117 TTC32Q5I0X7 151 aa13.83□□□□□ -0.2
SHISA4-202ENST00000464117 PHYHIPLQ96FC7 376 aa13.83□□□□□ -0.2
SHISA4-202ENST00000464117 UPK3BQ9BT76 320 aa13.83□□□□□ -0.2
SHISA4-202ENST00000464117 IGHV1OR15-1A0A075B7D0 117 aa13.82□□□□□ -0.2
SHISA4-202ENST00000464117 TRGV1A0A0A0MS02 117 aa13.82□□□□□ -0.2
SHISA4-202ENST00000464117 RBAKDNA6NC62 111 aa13.82□□□□□ -0.2
SHISA4-202ENST00000464117 SPINK4O60575 86 aa13.82□□□□□ -0.2
SHISA4-202ENST00000464117 IFNA5P01569 189 aa13.82□□□□□ -0.2
SHISA4-202ENST00000464117 TNP2Q05952 138 aa13.82□□□□□ -0.2
SHISA4-202ENST00000464117 FFAR4Q5NUL3 377 aa13.82□□□□□ -0.2
SHISA4-202ENST00000464117 PRR9Q5T870 116 aa13.82□□□□□ -0.2
SHISA4-202ENST00000464117 MUC4Q99102 2169 aa13.81□□□□□ -0.2
SHISA4-202ENST00000464117 RPL12P30050 165 aaKnown RBP13.81□□□□□ -0.2
SHISA4-202ENST00000464117 TAS2R45P59539 299 aa13.81□□□□□ -0.2
SHISA4-202ENST00000464117 RANP62826 216 aaKnown RBP13.81□□□□□ -0.2
SHISA4-202ENST00000464117 UBE2L3P68036 154 aaKnown RBP13.81□□□□□ -0.2
SHISA4-202ENST00000464117 ESRGQ1W209 222 aa13.81□□□□□ -0.2
SHISA4-202ENST00000464117 KHDC3LQ587J8 217 aa13.81□□□□□ -0.2
SHISA4-202ENST00000464117 SCGB1C1Q8TD33 95 aa13.81□□□□□ -0.2
SHISA4-202ENST00000464117 ARPC5LQ9BPX5 153 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms