RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 Q8N814 137 aa9.72□□□□□ -0.85
SMC1A-204ENST00000463684 ARPC5LQ9BPX5 153 aa9.72□□□□□ -0.85
SMC1A-204ENST00000463684 SLC25A21Q9BQT8 299 aaPredicted RBP9.72□□□□□ -0.85
SMC1A-204ENST00000463684 BOLA1Q9Y3E2 137 aa9.72□□□□□ -0.85
SMC1A-204ENST00000463684 UBR4Q5T4S7 5183 aa9.72□□□□□ -0.85
SMC1A-204ENST00000463684 ORM1P02763 201 aa9.71□□□□□ -0.86
SMC1A-204ENST00000463684 OR4E1P0C645 316 aa9.71□□□□□ -0.86
SMC1A-204ENST00000463684 AP3S2P59780 193 aa9.71□□□□□ -0.86
SMC1A-204ENST00000463684 ZNF415Q09FC8 603 aa9.71□□□□□ -0.86
SMC1A-204ENST00000463684 TMEM14EPQ6UXP3 125 aa9.71□□□□□ -0.86
SMC1A-204ENST00000463684 Q6ZRG5 221 aa9.71□□□□□ -0.86
SMC1A-204ENST00000463684 LINC00528Q8N1L1 170 aa9.71□□□□□ -0.86
SMC1A-204ENST00000463684 MRPL53Q96EL3 112 aaKnown RBP9.71□□□□□ -0.86
SMC1A-204ENST00000463684 DNAJC4Q9NNZ3 241 aa9.71□□□□□ -0.86
SMC1A-204ENST00000463684 TP53TG3Q9ULZ0 132 aa9.71□□□□□ -0.86
SMC1A-204ENST00000463684 TRAV5A0A0B4J249 113 aa9.7□□□□□ -0.86
SMC1A-204ENST00000463684 FABP12A6NFH5 140 aa9.7□□□□□ -0.86
SMC1A-204ENST00000463684 ZNF253O75346 499 aa9.7□□□□□ -0.86
SMC1A-204ENST00000463684 GYPEP15421 78 aa9.7□□□□□ -0.86
SMC1A-204ENST00000463684 SPCS2Q15005 226 aa9.7□□□□□ -0.86
SMC1A-204ENST00000463684 IQCF2Q8IXL9 164 aa9.7□□□□□ -0.86
SMC1A-204ENST00000463684 TOMM5Q8N4H5 51 aa9.7□□□□□ -0.86
SMC1A-204ENST00000463684 MCFD2Q8NI22 146 aa9.7□□□□□ -0.86
SMC1A-204ENST00000463684 TXNDC17Q9BRA2 123 aa9.7□□□□□ -0.86
SMC1A-204ENST00000463684 RCL1Q9Y2P8 373 aaKnown RBP9.7□□□□□ -0.86
SMC1A-204ENST00000463684 IGHV1OR15-1A0A075B7D0 117 aa9.69□□□□□ -0.86
SMC1A-204ENST00000463684 NMBP08949 121 aa9.69□□□□□ -0.86
SMC1A-204ENST00000463684 RAB31Q13636 194 aa9.69□□□□□ -0.86
SMC1A-204ENST00000463684 HMCN2Q8NDA2 5059 aa9.69□□□□□ -0.86
SMC1A-204ENST00000463684 FAM19A4Q96LR4 140 aa9.69□□□□□ -0.86
SMC1A-204ENST00000463684 GGACTQ9BVM4 153 aa9.69□□□□□ -0.86
SMC1A-204ENST00000463684 AGPAT4-IT1Q9H0P7 198 aa9.69□□□□□ -0.86
SMC1A-204ENST00000463684 PLA2G2DQ9UNK4 145 aa9.69□□□□□ -0.86
SMC1A-204ENST00000463684 PRELID1Q9Y255 219 aa9.69□□□□□ -0.86
SMC1A-204ENST00000463684 IGHV3-38A0A0C4DH36 116 aa9.68□□□□□ -0.86
SMC1A-204ENST00000463684 C9JCJ5 164 aa9.68□□□□□ -0.86
SMC1A-204ENST00000463684 M0R3E3 92 aa9.68□□□□□ -0.86
SMC1A-204ENST00000463684 SFTA3P0C7M3 94 aa9.68□□□□□ -0.86
SMC1A-204ENST00000463684 CRISP2P16562 243 aa9.68□□□□□ -0.86
SMC1A-204ENST00000463684 TAS2R30P59541 319 aa9.68□□□□□ -0.86
SMC1A-204ENST00000463684 C12orf45Q8N5I9 185 aaPredicted RBP9.68□□□□□ -0.86
SMC1A-204ENST00000463684 OR1L4Q8NGR5 311 aa9.68□□□□□ -0.86
SMC1A-204ENST00000463684 RAB2BQ8WUD1 216 aa9.68□□□□□ -0.86
SMC1A-204ENST00000463684 MGST2Q99735 147 aa9.68□□□□□ -0.86
SMC1A-204ENST00000463684 TIMM9Q9Y5J7 89 aa9.68□□□□□ -0.86
SMC1A-204ENST00000463684 TRBV19A0A075B6N1 114 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 TSC22D2O75157 780 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 SCGB1D2O95969 90 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 TNFSF8P32971 234 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 CAMLGP49069 296 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 TMEM78Q5T7P6 136 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 SH2D6Q7Z4S9 175 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 ZNF479Q96JC4 524 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 PFDN5Q99471 154 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 SOSTQ9BQB4 213 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 SRRQ9GZT4 340 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 Q9HAA7 133 aa9.67□□□□□ -0.86
SMC1A-204ENST00000463684 C9orf170A2RU37 121 aa9.66□□□□□ -0.86
SMC1A-204ENST00000463684 IBA57-AS1B1ANH7 110 aa9.66□□□□□ -0.86
SMC1A-204ENST00000463684 HIST1H1EP10412 219 aaKnown RBP9.66□□□□□ -0.86
SMC1A-204ENST00000463684 UBE2MP61081 183 aaKnown RBP9.66□□□□□ -0.86
SMC1A-204ENST00000463684 ARL16Q0P5N6 197 aa9.66□□□□□ -0.86
SMC1A-204ENST00000463684 C9orf47Q6ZRZ4 202 aa9.66□□□□□ -0.86
SMC1A-204ENST00000463684 OR10G4Q8NGN3 311 aa9.66□□□□□ -0.86
SMC1A-204ENST00000463684 SLC25A31Q9H0C2 315 aa9.66□□□□□ -0.86
SMC1A-204ENST00000463684 OXTP01178 125 aa9.65□□□□□ -0.86
SMC1A-204ENST00000463684 PPT1P50897 306 aa9.65□□□□□ -0.86
SMC1A-204ENST00000463684 PYDC2Q56P42 97 aa9.65□□□□□ -0.86
SMC1A-204ENST00000463684 LINC01556Q5JQF7 62 aa9.65□□□□□ -0.86
SMC1A-204ENST00000463684 MIC13Q5XKP0 118 aa9.65□□□□□ -0.86
SMC1A-204ENST00000463684 NRARPQ7Z6K4 114 aa9.65□□□□□ -0.86
SMC1A-204ENST00000463684 ZFAND2AQ8N6M9 145 aa9.65□□□□□ -0.86
SMC1A-204ENST00000463684 DYNC2LI1Q8TCX1 351 aa9.65□□□□□ -0.86
SMC1A-204ENST00000463684 BLNKQ8WV28 456 aa9.65□□□□□ -0.86
SMC1A-204ENST00000463684 AAMDCQ9H7C9 122 aa9.65□□□□□ -0.86
SMC1A-204ENST00000463684 TRAV8-6A0A0B4J262 113 aa9.64□□□□□ -0.87
SMC1A-204ENST00000463684 PDE6HQ13956 83 aa9.64□□□□□ -0.87
SMC1A-204ENST00000463684 PRR9Q5T870 116 aa9.64□□□□□ -0.87
SMC1A-204ENST00000463684 Q6ZQT7 251 aa9.64□□□□□ -0.87
SMC1A-204ENST00000463684 Q6ZSA8 131 aa9.64□□□□□ -0.87
SMC1A-204ENST00000463684 NHLRC2Q8NBF2 726 aa9.64□□□□□ -0.87
SMC1A-204ENST00000463684 DEDD2Q8WXF8 326 aa9.64□□□□□ -0.87
SMC1A-204ENST00000463684 RASL10AQ92737 203 aa9.64□□□□□ -0.87
SMC1A-204ENST00000463684 SPXQ9BT56 116 aa9.64□□□□□ -0.87
SMC1A-204ENST00000463684 GSKIPQ9P0R6 139 aa9.64□□□□□ -0.87
SMC1A-204ENST00000463684 IGKV2-40A0A087WW87 121 aaPredicted RBP9.63□□□□□ -0.87
SMC1A-204ENST00000463684 NDUFB4O95168 129 aa9.63□□□□□ -0.87
SMC1A-204ENST00000463684 IGKV2D-40P01614 121 aaPredicted RBP9.63□□□□□ -0.87
SMC1A-204ENST00000463684 SMIM18P0DKX4 95 aa9.63□□□□□ -0.87
SMC1A-204ENST00000463684 TIRAPP58753 221 aa9.63□□□□□ -0.87
SMC1A-204ENST00000463684 IAH1Q2TAA2 248 aaPredicted RBP9.63□□□□□ -0.87
SMC1A-204ENST00000463684 EXOC3-AS1Q8N2X6 119 aa9.63□□□□□ -0.87
SMC1A-204ENST00000463684 TRIM63Q969Q1 353 aa9.63□□□□□ -0.87
SMC1A-204ENST00000463684 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
SMC1A-204ENST00000463684 TMEM14CQ9P0S9 112 aa9.63□□□□□ -0.87
SMC1A-204ENST00000463684 ZNF492Q9P255 531 aa9.63□□□□□ -0.87
SMC1A-204ENST00000463684 DNAH8Q96JB1 4490 aa9.63□□□□□ -0.87
SMC1A-204ENST00000463684 C7orf66A4D0T2 115 aa9.62□□□□□ -0.87
SMC1A-204ENST00000463684 L7N2F9 121 aa9.62□□□□□ -0.87
SMC1A-204ENST00000463684 VAMP2P63027 116 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms