RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 TMED6Q8WW62 240 aa8.65□□□□□ -1.02
HPS1-206ENST00000462743 LINC01587Q99440 93 aa8.65□□□□□ -1.02
HPS1-206ENST00000462743 VGLL1Q99990 258 aa8.65□□□□□ -1.02
HPS1-206ENST00000462743 TMEM208Q9BTX3 173 aa8.65□□□□□ -1.02
HPS1-206ENST00000462743 DKK2Q9UBU2 259 aa8.65□□□□□ -1.02
HPS1-206ENST00000462743 LENEPQ9Y5L5 61 aa8.65□□□□□ -1.02
HPS1-206ENST00000462743 CTXND1A0A1B0GTU2 59 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 LOC102723971A0A1B0GUV8 181 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 HMGB3O15347 200 aaKnown RBP8.64□□□□□ -1.03
HPS1-206ENST00000462743 EIF3GO75821 320 aaKnown RBP eCLIP8.64□□□□□ -1.03
HPS1-206ENST00000462743 CXorf1O96002 111 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 SEC11BP0C7V7 166 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 GCHFRP30047 84 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 TCTAP57738 103 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 ERCC8Q13216 396 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 PMS2P11Q13670 270 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 KIR3DS1Q14943 382 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 FAM74A1Q5RGS3 127 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 TMEM78Q5T7P6 136 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 GFI1BQ5VTD9 330 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 ZNF493Q6ZR52 646 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 LINC00467Q9BRT7 94 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 TMEM167BQ9NRX6 74 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 CELA1Q9UNI1 258 aa8.64□□□□□ -1.03
HPS1-206ENST00000462743 IGKV2-40A0A087WW87 121 aaPredicted RBP8.63□□□□□ -1.03
HPS1-206ENST00000462743 LCE6AA0A183 80 aa8.63□□□□□ -1.03
HPS1-206ENST00000462743 ZNF705GA8MUZ8 300 aaPredicted RBP8.63□□□□□ -1.03
HPS1-206ENST00000462743 ZNF324O75467 553 aaPredicted RBP8.63□□□□□ -1.03
HPS1-206ENST00000462743 IGKV2D-40P01614 121 aaPredicted RBP8.63□□□□□ -1.03
HPS1-206ENST00000462743 AZU1P20160 251 aa8.63□□□□□ -1.03
HPS1-206ENST00000462743 ZNF138P52744 262 aa8.63□□□□□ -1.03
HPS1-206ENST00000462743 EIF5AP63241 154 aaKnown RBP8.63□□□□□ -1.03
HPS1-206ENST00000462743 ZNF726P1Q15940 193 aa8.63□□□□□ -1.03
HPS1-206ENST00000462743 AKR1C8PQ5T2L2 129 aa8.63□□□□□ -1.03
HPS1-206ENST00000462743 ZFAND2AQ8N6M9 145 aa8.63□□□□□ -1.03
HPS1-206ENST00000462743 YTHDF2Q9Y5A9 579 aaKnown RBP8.63□□□□□ -1.03
HPS1-206ENST00000462743 KMT2CQ8NEZ4 4911 aaKnown RBP8.63□□□□□ -1.03
HPS1-206ENST00000462743 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 A0A1W2PRE2 83 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 PLAC8L1A1L4L8 177 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 LYRM9A8MSI8 78 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 BCL2L11O43521 198 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 FAM222AQ5U5X8 452 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 Q6ZTC4 211 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 TMUB2Q71RG4 321 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 CMTM2Q8TAZ6 248 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 PYGO2Q9BRQ0 406 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 NIPSNAP3BQ9BS92 247 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 PLA2G2EQ9NZK7 142 aa8.62□□□□□ -1.03
HPS1-206ENST00000462743 SERTM2A0A1B0GWG4 89 aa8.61□□□□□ -1.03
HPS1-206ENST00000462743 KANTRA0A1W2PQU2 76 aa8.61□□□□□ -1.03
HPS1-206ENST00000462743 C7orf71A4D174 169 aa8.61□□□□□ -1.03
HPS1-206ENST00000462743 UMAD1C9J7I0 102 aa8.61□□□□□ -1.03
HPS1-206ENST00000462743 C1QBP02746 253 aa8.61□□□□□ -1.03
HPS1-206ENST00000462743 PRM2P04554 102 aa8.61□□□□□ -1.03
HPS1-206ENST00000462743 PLECQ15149 4684 aaKnown RBP8.61□□□□□ -1.03
HPS1-206ENST00000462743 LGALSLQ3ZCW2 172 aaPredicted RBP8.61□□□□□ -1.03
HPS1-206ENST00000462743 SSX7Q7RTT5 188 aa8.61□□□□□ -1.03
HPS1-206ENST00000462743 C5orf17Q8NAS9 161 aa8.61□□□□□ -1.03
HPS1-206ENST00000462743 RNASE8Q8TDE3 154 aaKnown RBP8.61□□□□□ -1.03
HPS1-206ENST00000462743 C2CD4CQ8TF44 421 aa8.61□□□□□ -1.03
HPS1-206ENST00000462743 TMEM263Q8WUH6 116 aaKnown RBP8.61□□□□□ -1.03
HPS1-206ENST00000462743 MBD3L1Q8WWY6 194 aa8.61□□□□□ -1.03
HPS1-206ENST00000462743 C16orf74Q96GX8 76 aa8.61□□□□□ -1.03
HPS1-206ENST00000462743 ZNF471Q9BX82 626 aaPredicted RBP8.61□□□□□ -1.03
HPS1-206ENST00000462743 TRAV12-3A0A0B4J271 114 aa8.6□□□□□ -1.03
HPS1-206ENST00000462743 GPX1P07203 203 aa8.6□□□□□ -1.03
HPS1-206ENST00000462743 EMP1P54849 157 aa8.6□□□□□ -1.03
HPS1-206ENST00000462743 SUMO1P63165 101 aaKnown RBP8.6□□□□□ -1.03
HPS1-206ENST00000462743 CD300CQ08708 224 aa8.6□□□□□ -1.03
HPS1-206ENST00000462743 ANXA2RQ3ZCQ2 193 aa8.6□□□□□ -1.03
HPS1-206ENST00000462743 CCDC28AQ8IWP9 274 aa8.6□□□□□ -1.03
HPS1-206ENST00000462743 STOML3Q8TAV4 291 aa8.6□□□□□ -1.03
HPS1-206ENST00000462743 FAM210BQ96KR6 192 aa8.6□□□□□ -1.03
HPS1-206ENST00000462743 HYLS1Q96M11 299 aa8.6□□□□□ -1.03
HPS1-206ENST00000462743 LYSTQ99698 3801 aa8.6□□□□□ -1.03
HPS1-206ENST00000462743 NKX6-2Q9C056 277 aaPredicted RBP8.6□□□□□ -1.03
HPS1-206ENST00000462743 FBLL1A6NHQ2 334 aaKnown RBP8.59□□□□□ -1.03
HPS1-206ENST00000462743 RNASE4P34096 147 aaKnown RBP8.59□□□□□ -1.03
HPS1-206ENST00000462743 DPPA3Q6W0C5 159 aa8.59□□□□□ -1.03
HPS1-206ENST00000462743 EPDR1Q9UM22 224 aa8.59□□□□□ -1.03
HPS1-206ENST00000462743 TIMM8BQ9Y5J9 83 aaPredicted RBP8.59□□□□□ -1.03
HPS1-206ENST00000462743 DEFB131BA0A096LNP1 70 aa8.58□□□□□ -1.04
HPS1-206ENST00000462743 TCRAP04437 139 aa8.58□□□□□ -1.04
HPS1-206ENST00000462743 TPT1P13693 172 aaKnown RBP8.58□□□□□ -1.04
HPS1-206ENST00000462743 DAZ2Q13117 558 aaKnown RBP8.58□□□□□ -1.04
HPS1-206ENST00000462743 PRR9Q5T870 116 aa8.58□□□□□ -1.04
HPS1-206ENST00000462743 Q6AWC8 147 aa8.58□□□□□ -1.04
HPS1-206ENST00000462743 GOLT1AQ6ZVE7 132 aa8.58□□□□□ -1.04
HPS1-206ENST00000462743 EIF4E3Q8N5X7 224 aaKnown RBP8.58□□□□□ -1.04
HPS1-206ENST00000462743 LINC00612Q8N6U2 182 aa8.58□□□□□ -1.04
HPS1-206ENST00000462743 TMPRSS5Q9H3S3 457 aa8.58□□□□□ -1.04
HPS1-206ENST00000462743 APLNQ9ULZ1 77 aa8.58□□□□□ -1.04
HPS1-206ENST00000462743 ARL2-SNX15V9GYD0 113 aa8.58□□□□□ -1.04
HPS1-206ENST00000462743 MUC4Q99102 2169 aa8.58□□□□□ -1.04
HPS1-206ENST00000462743 MAP1LC3B2A6NCE7 125 aa8.57□□□□□ -1.04
HPS1-206ENST00000462743 FAM74A7A6NL05 159 aa8.57□□□□□ -1.04
HPS1-206ENST00000462743 GGTLC3B5MD39 225 aa8.57□□□□□ -1.04
HPS1-206ENST00000462743 J3KRW8 73 aa8.57□□□□□ -1.04
HPS1-206ENST00000462743 PFDN1O60925 122 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms