RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 MBD3L1Q8WWY6 194 aa8.47□□□□□ -1.05
TRAF3IP1-204ENST00000462122 NEU1Q99519 415 aa8.47□□□□□ -1.05
TRAF3IP1-204ENST00000462122 SERTM2A0A1B0GWG4 89 aa8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 DIRC3C9JPN6 131 aa8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 CRXO43186 299 aaPredicted RBP8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 H2AFB1P0C5Y9 115 aa8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 CT45A10P0DMU9 189 aa8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 FGF8P55075 233 aaPredicted RBP8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 ERCC8Q13216 396 aa8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 C5orf17Q8NAS9 161 aa8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 SFT2D1Q8WV19 159 aa8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 NKX6-2Q9C056 277 aaPredicted RBP8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 C11orf68Q9H3H3 251 aaKnown RBP8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 ARL2-SNX15V9GYD0 113 aa8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 X6R8D5 127 aa8.46□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TRBV7-9A0A0J9YWB2 115 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 A0A0J9YWU9 116 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 SMIM9A6NGZ8 99 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 NMBP08949 121 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 SULT1A2P50226 295 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 ZNF138P52744 262 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 NKX2-5P52952 324 aaPredicted RBP8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 C1orf158Q8N1D5 194 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TMEM256Q8N2U0 113 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 Q8NAQ8 132 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 FAM19A4Q96LR4 140 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 VGLL1Q99990 258 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 C20orf144Q9BQM9 153 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TMEM208Q9BTX3 173 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 AGPAT4-IT1Q9H0P7 198 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TMPRSS5Q9H3S3 457 aa8.45□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TRAV12-2A0A075B6T6 113 aa8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 IGHV3OR16-12A0A075B7B8 117 aa8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 IGHV4-28A0A0C4DH34 117 aa8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 GGTLC3B5MD39 225 aa8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TEX46H3BTG2 121 aa8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 K7EQM0 130 aa8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 PPT1P50897 306 aa8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 SUMO1P63165 101 aaKnown RBP8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 IL17DQ8TAD2 202 aa8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 ZNF492Q9P255 531 aa8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 RPH3ALQ9UNE2 315 aa8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 LENEPQ9Y5L5 61 aa8.44□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TMEM189A5PLL7 270 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 FAM74A7A6NL05 159 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 KLLNB2CW77 178 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 H7BYZ3 331 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 HBE1P02100 147 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TCRAP04437 139 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 CRISP2P16562 243 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 UBE2G2P60604 165 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 GNG5P63218 68 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 GFI1BQ5VTD9 330 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 GOLT1AQ6ZVE7 132 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TCEAL7Q9BRU2 100 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 EPDR1Q9UM22 224 aa8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 YTHDF2Q9Y5A9 579 aaKnown RBP8.43□□□□□ -1.06
TRAF3IP1-204ENST00000462122 CSMD3Q7Z407 3707 aa8.42□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TRAV1-1A0A0B4J248 108 aa8.42□□□□□ -1.06
TRAF3IP1-204ENST00000462122 FBLL1A6NHQ2 334 aaKnown RBP8.42□□□□□ -1.06
TRAF3IP1-204ENST00000462122 RRN3P1Q2M238 152 aa8.42□□□□□ -1.06
TRAF3IP1-204ENST00000462122 CYB561D1Q8N8Q1 229 aa8.42□□□□□ -1.06
TRAF3IP1-204ENST00000462122 Q8TAT8 98 aa8.42□□□□□ -1.06
TRAF3IP1-204ENST00000462122 MUC7Q8TAX7 377 aa8.42□□□□□ -1.06
TRAF3IP1-204ENST00000462122 HIST1H2BAQ96A08 127 aa8.42□□□□□ -1.06
TRAF3IP1-204ENST00000462122 NIPSNAP3BQ9BS92 247 aa8.42□□□□□ -1.06
TRAF3IP1-204ENST00000462122 ATG101Q9BSB4 218 aa8.42□□□□□ -1.06
TRAF3IP1-204ENST00000462122 A0A1B0GV50 99 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 C7orf71A4D174 169 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 J3KRW8 73 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 IFNA7P01567 189 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 GPX1P07203 203 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 RBMY1A1P0DJD3 496 aaKnown RBP8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 RBMY1CP0DJD4 496 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TAS2R60P59551 318 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 KIR3DS1Q14943 382 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 RBMY1FQ15415 496 aaKnown RBP8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 ZFAND2AQ8N6M9 145 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TMEM75Q8N9X5 138 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 LINC01587Q99440 93 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 NDFIP1Q9BT67 221 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 MANBALQ9NQG1 85 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 STARD9Q9P2P6 4700 aa8.41□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TRAV8-1A0A0A6YYK1 113 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TRAV12-3A0A0B4J271 114 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 TEX48A0A1B0GUV7 120 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 LOC102723971A0A1B0GUV8 181 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 F6UZH7 168 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 C3orf84H3BNL1 204 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 DEFB4AO15263 64 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 PAGE4O60829 102 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 CST9LP1Q5W188 147 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 ALKAL2Q6UX46 152 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 CCDC28AQ8IWP9 274 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 PYGO2Q9BRQ0 406 aa8.4□□□□□ -1.06
TRAF3IP1-204ENST00000462122 PEX7O00628 323 aa8.39□□□□□ -1.07
TRAF3IP1-204ENST00000462122 RNASE4P34096 147 aaKnown RBP8.39□□□□□ -1.07
TRAF3IP1-204ENST00000462122 FLI1Q01543 452 aaPredicted RBP8.39□□□□□ -1.07
TRAF3IP1-204ENST00000462122 BTN1A1Q13410 526 aa8.39□□□□□ -1.07
TRAF3IP1-204ENST00000462122 ZNF493Q6ZR52 646 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms