RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 RPL7P18124 248 aaKnown RBP14.35□□□□□ -0.11
HPS3-204ENST00000462030 EVI2AP22794 236 aa14.35□□□□□ -0.11
HPS3-204ENST00000462030 LEPP41159 167 aa14.35□□□□□ -0.11
HPS3-204ENST00000462030 NPBQ8NG41 125 aa14.35□□□□□ -0.11
HPS3-204ENST00000462030 PSMG3-AS1Q96PY0 264 aa14.35□□□□□ -0.11
HPS3-204ENST00000462030 C21orf62Q9NYP8 219 aa14.35□□□□□ -0.11
HPS3-204ENST00000462030 DPM3Q9P2X0 92 aa14.35□□□□□ -0.11
HPS3-204ENST00000462030 G3V4G9 280 aa14.34□□□□□ -0.11
HPS3-204ENST00000462030 C5orf64Q2M2E5 130 aa14.34□□□□□ -0.11
HPS3-204ENST00000462030 BMI1P35226 326 aa14.34□□□□□ -0.11
HPS3-204ENST00000462030 ODF1Q14990 250 aa14.34□□□□□ -0.11
HPS3-204ENST00000462030 SPTBN2O15020 2390 aa14.34□□□□□ -0.11
HPS3-204ENST00000462030 GATA1P15976 413 aaPredicted RBP14.33□□□□□ -0.12
HPS3-204ENST00000462030 FXYD2P54710 66 aa14.33□□□□□ -0.12
HPS3-204ENST00000462030 NEGR1Q7Z3B1 354 aa14.33□□□□□ -0.12
HPS3-204ENST00000462030 ZNF48Q96MX3 618 aaPredicted RBP14.33□□□□□ -0.12
HPS3-204ENST00000462030 IGHV3-35A0A0C4DH35 117 aa14.33□□□□□ -0.12
HPS3-204ENST00000462030 GCSHP23434 173 aa14.33□□□□□ -0.12
HPS3-204ENST00000462030 Q8NA96 180 aa14.33□□□□□ -0.12
HPS3-204ENST00000462030 NPFFR1Q9GZQ6 430 aa14.33□□□□□ -0.12
HPS3-204ENST00000462030 HHLA3Q9XRX5 114 aa14.33□□□□□ -0.12
HPS3-204ENST00000462030 ZNF292O60281 2723 aa14.32□□□□□ -0.12
HPS3-204ENST00000462030 LY6HO94772 140 aa14.32□□□□□ -0.12
HPS3-204ENST00000462030 CD3EP07766 207 aa14.32□□□□□ -0.12
HPS3-204ENST00000462030 PPIFP30405 207 aaKnown RBP14.32□□□□□ -0.12
HPS3-204ENST00000462030 ERCC8Q13216 396 aa14.32□□□□□ -0.12
HPS3-204ENST00000462030 ARPC1AQ92747 370 aa14.32□□□□□ -0.12
HPS3-204ENST00000462030 ZFHX2Q9C0A1 2572 aaPredicted RBP14.32□□□□□ -0.12
HPS3-204ENST00000462030 LRBAP50851 2863 aa14.32□□□□□ -0.12
HPS3-204ENST00000462030 TNFRSF6BO95407 300 aa14.32□□□□□ -0.12
HPS3-204ENST00000462030 PRR30Q53SZ7 412 aaPredicted RBP14.32□□□□□ -0.12
HPS3-204ENST00000462030 ZNF562Q6V9R5 426 aa14.32□□□□□ -0.12
HPS3-204ENST00000462030 FBLL1A6NHQ2 334 aaKnown RBP14.31□□□□□ -0.12
HPS3-204ENST00000462030 FCER1GP30273 86 aa14.31□□□□□ -0.12
HPS3-204ENST00000462030 LY6G5BQ8NDX9 201 aa14.31□□□□□ -0.12
HPS3-204ENST00000462030 ZMAT4Q9H898 229 aa14.31□□□□□ -0.12
HPS3-204ENST00000462030 LINC01546A6NGU7 62 aa14.31□□□□□ -0.12
HPS3-204ENST00000462030 ZNF672Q499Z4 452 aaPredicted RBP14.31□□□□□ -0.12
HPS3-204ENST00000462030 DYNAPQ8N1N2 210 aa14.31□□□□□ -0.12
HPS3-204ENST00000462030 OR11H6Q8NGC7 330 aa14.31□□□□□ -0.12
HPS3-204ENST00000462030 OR5A1Q8NGJ0 315 aa14.31□□□□□ -0.12
HPS3-204ENST00000462030 CNFNQ9BYD5 112 aa14.31□□□□□ -0.12
HPS3-204ENST00000462030 PRAC2D3DTV9 90 aa14.3□□□□□ -0.12
HPS3-204ENST00000462030 PRSS1P07477 247 aa14.3□□□□□ -0.12
HPS3-204ENST00000462030 CTSGP08311 255 aa14.3□□□□□ -0.12
HPS3-204ENST00000462030 SAMD5Q5TGI4 173 aa14.3□□□□□ -0.12
HPS3-204ENST00000462030 PIFOQ8TCI5 191 aa14.3□□□□□ -0.12
HPS3-204ENST00000462030 K7ERJ3 54 aa14.3□□□□□ -0.12
HPS3-204ENST00000462030 SMIM13P0DJ93 91 aa14.3□□□□□ -0.12
HPS3-204ENST00000462030 FABP2P12104 132 aa14.3□□□□□ -0.12
HPS3-204ENST00000462030 TTC9CQ8N5M4 171 aa14.3□□□□□ -0.12
HPS3-204ENST00000462030 CHAC1Q9BUX1 264 aa14.3□□□□□ -0.12
HPS3-204ENST00000462030 NCBP2LA6PVI3 153 aaKnown RBP14.29□□□□□ -0.12
HPS3-204ENST00000462030 GTSCR1Q86UQ5 136 aa14.29□□□□□ -0.12
HPS3-204ENST00000462030 LINC01560Q8TB33 94 aa14.29□□□□□ -0.12
HPS3-204ENST00000462030 TMEM158Q8WZ71 300 aa14.29□□□□□ -0.12
HPS3-204ENST00000462030 FOXC2Q99958 501 aa14.29□□□□□ -0.12
HPS3-204ENST00000462030 FABP5P3A8MUU1 101 aa14.29□□□□□ -0.12
HPS3-204ENST00000462030 IGKCP01834 107 aa14.28□□□□□ -0.12
HPS3-204ENST00000462030 NXT2Q9NPJ8 142 aaKnown RBP14.28□□□□□ -0.12
HPS3-204ENST00000462030 CEACAM3P40198 252 aa14.27□□□□□ -0.12
HPS3-204ENST00000462030 SRSF2Q01130 221 aaKnown RBP14.27□□□□□ -0.12
HPS3-204ENST00000462030 RNF182Q8N6D2 247 aa14.27□□□□□ -0.12
HPS3-204ENST00000462030 HIGD1BQ9P298 99 aa14.27□□□□□ -0.12
HPS3-204ENST00000462030 ABCA4P78363 2273 aa14.27□□□□□ -0.12
HPS3-204ENST00000462030 K7EMI3 77 aa14.27□□□□□ -0.13
HPS3-204ENST00000462030 IL17RELQ6ZVW7 336 aa14.27□□□□□ -0.13
HPS3-204ENST00000462030 DTX2Q86UW9 622 aa14.27□□□□□ -0.13
HPS3-204ENST00000462030 TRBV25-1A0A075B6N4 114 aa14.26□□□□□ -0.13
HPS3-204ENST00000462030 ODF3BA8MYP8 253 aa14.26□□□□□ -0.13
HPS3-204ENST00000462030 TMEM238C9JI98 176 aa14.26□□□□□ -0.13
HPS3-204ENST00000462030 ZC2HC1BQ5TFG8 222 aa14.26□□□□□ -0.13
HPS3-204ENST00000462030 TRGV3P03979 118 aa14.26□□□□□ -0.13
HPS3-204ENST00000462030 LINC01559Q495D7 138 aa14.26□□□□□ -0.13
HPS3-204ENST00000462030 WNK2Q9Y3S1 2297 aa14.26□□□□□ -0.13
HPS3-204ENST00000462030 IGLV2-18A0A075B6J9 118 aa14.25□□□□□ -0.13
HPS3-204ENST00000462030 TMEM8BA6NDV4 472 aa14.25□□□□□ -0.13
HPS3-204ENST00000462030 PHLDA1Q8WV24 401 aaPredicted RBP14.25□□□□□ -0.13
HPS3-204ENST00000462030 C11orf21Q9P2W6 132 aa14.25□□□□□ -0.13
HPS3-204ENST00000462030 IGKV3D-20A0A0C4DH25 116 aa14.24□□□□□ -0.13
HPS3-204ENST00000462030 NHP2Q9NX24 153 aaKnown RBP14.24□□□□□ -0.13
HPS3-204ENST00000462030 DPM2O94777 84 aa14.24□□□□□ -0.13
HPS3-204ENST00000462030 GRNP28799 593 aaKnown RBP14.24□□□□□ -0.13
HPS3-204ENST00000462030 Q8N8P6 123 aa14.24□□□□□ -0.13
HPS3-204ENST00000462030 IGHV3-66A0A0C4DH42 116 aa14.23□□□□□ -0.13
HPS3-204ENST00000462030 TMEM160Q9NX00 188 aa14.23□□□□□ -0.13
HPS3-204ENST00000462030 TRAV26-2A0A0B4J265 109 aa14.23□□□□□ -0.13
HPS3-204ENST00000462030 TRAV40A0A0B4J280 105 aa14.23□□□□□ -0.13
HPS3-204ENST00000462030 SMIM17P0DL12 118 aa14.23□□□□□ -0.13
HPS3-204ENST00000462030 RPL24P83731 157 aaKnown RBP14.22□□□□□ -0.13
HPS3-204ENST00000462030 MRPL35Q9NZE8 188 aaKnown RBP14.22□□□□□ -0.13
HPS3-204ENST00000462030 TEX48A0A1B0GUV7 120 aa14.22□□□□□ -0.13
HPS3-204ENST00000462030 ATP5LO75964 103 aa14.22□□□□□ -0.13
HPS3-204ENST00000462030 PRTN3P24158 256 aa14.22□□□□□ -0.13
HPS3-204ENST00000462030 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.22□□□□□ -0.13
HPS3-204ENST00000462030 CEND1Q8N111 149 aa14.22□□□□□ -0.13
HPS3-204ENST00000462030 Q8N6K4 173 aa14.22□□□□□ -0.13
HPS3-204ENST00000462030 MAPKAPK5-AS1Q8N8E1 139 aa14.22□□□□□ -0.13
HPS3-204ENST00000462030 IGHV3OR16-13A0A075B7E8 117 aa14.21□□□□□ -0.13
HPS3-204ENST00000462030 IGHV7-81A0A0B4J1V7 117 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms