RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 C15orf53Q8NAA6 179 aa10.85□□□□□ -0.67
NUP50-213ENST00000461437 ATG101Q9BSB4 218 aa10.85□□□□□ -0.67
NUP50-213ENST00000461437 MARVELD1Q9BSK0 173 aa10.85□□□□□ -0.67
NUP50-213ENST00000461437 AGPAT4-IT1Q9H0P7 198 aa10.85□□□□□ -0.67
NUP50-213ENST00000461437 A0A0J9YY99 117 aa10.84□□□□□ -0.67
NUP50-213ENST00000461437 HOXA5P20719 270 aa10.84□□□□□ -0.67
NUP50-213ENST00000461437 OR5I1Q13606 314 aa10.84□□□□□ -0.67
NUP50-213ENST00000461437 RNF212Q495C1 297 aa10.84□□□□□ -0.67
NUP50-213ENST00000461437 ZNF493Q6ZR52 646 aa10.84□□□□□ -0.67
NUP50-213ENST00000461437 CCDC28AQ8IWP9 274 aa10.84□□□□□ -0.67
NUP50-213ENST00000461437 PHYHIPLQ96FC7 376 aa10.84□□□□□ -0.67
NUP50-213ENST00000461437 VGLL1Q99990 258 aa10.84□□□□□ -0.67
NUP50-213ENST00000461437 C20orf144Q9BQM9 153 aa10.84□□□□□ -0.67
NUP50-213ENST00000461437 C7orf71A4D174 169 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 SNURFLB1AK76 121 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 MPC2O95563 127 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 RNASE4P34096 147 aaKnown RBP10.83□□□□□ -0.68
NUP50-213ENST00000461437 Q6ZTI0 123 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 FXYD5Q96DB9 178 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 MRPL53Q96EL3 112 aaKnown RBP10.83□□□□□ -0.68
NUP50-213ENST00000461437 ZNF503Q96F45 646 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 FAM19A4Q96LR4 140 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 ODF3Q96PU9 254 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 PAXXQ9BUH6 204 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 OR51M1Q9H341 326 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 GSN-AS1Q9NRJ2 163 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 LINC00588Q9Y4M8 146 aa10.83□□□□□ -0.68
NUP50-213ENST00000461437 TRAV26-1A0A087WT03 109 aa10.82□□□□□ -0.68
NUP50-213ENST00000461437 NBEAP1P0C6P0 100 aa10.82□□□□□ -0.68
NUP50-213ENST00000461437 CYCSP99999 105 aaKnown RBP10.82□□□□□ -0.68
NUP50-213ENST00000461437 LINC00612Q8N6U2 182 aa10.82□□□□□ -0.68
NUP50-213ENST00000461437 Q8TAT8 98 aa10.82□□□□□ -0.68
NUP50-213ENST00000461437 ATP5SQ99766 215 aa10.82□□□□□ -0.68
NUP50-213ENST00000461437 TMPRSS5Q9H3S3 457 aa10.82□□□□□ -0.68
NUP50-213ENST00000461437 MBD2Q9UBB5 411 aa10.82□□□□□ -0.68
NUP50-213ENST00000461437 TP53TG3Q9ULZ0 132 aa10.82□□□□□ -0.68
NUP50-213ENST00000461437 FUT9Q9Y231 359 aa10.82□□□□□ -0.68
NUP50-213ENST00000461437 HSPB11Q9Y547 144 aa10.82□□□□□ -0.68
NUP50-213ENST00000461437 KLLNB2CW77 178 aa10.81□□□□□ -0.68
NUP50-213ENST00000461437 OR7C2O60412 319 aa10.81□□□□□ -0.68
NUP50-213ENST00000461437 SLC25A5P05141 298 aaKnown RBP10.81□□□□□ -0.68
NUP50-213ENST00000461437 PDE6HQ13956 83 aa10.81□□□□□ -0.68
NUP50-213ENST00000461437 FFAR4Q5NUL3 377 aa10.81□□□□□ -0.68
NUP50-213ENST00000461437 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
NUP50-213ENST00000461437 PYGO2Q9BRQ0 406 aa10.81□□□□□ -0.68
NUP50-213ENST00000461437 AAMDCQ9H7C9 122 aa10.81□□□□□ -0.68
NUP50-213ENST00000461437 WFDC1Q9HC57 220 aa10.81□□□□□ -0.68
NUP50-213ENST00000461437 PRELID1Q9Y255 219 aa10.81□□□□□ -0.68
NUP50-213ENST00000461437 ZNF324O75467 553 aaPredicted RBP10.8□□□□□ -0.68
NUP50-213ENST00000461437 RPL12P30050 165 aaKnown RBP10.8□□□□□ -0.68
NUP50-213ENST00000461437 DEFA1P59665 94 aa10.8□□□□□ -0.68
NUP50-213ENST00000461437 DEFA3P59666 94 aa10.8□□□□□ -0.68
NUP50-213ENST00000461437 ZFAND2AQ8N6M9 145 aa10.8□□□□□ -0.68
NUP50-213ENST00000461437 C11orf72Q8NBR9 251 aa10.8□□□□□ -0.68
NUP50-213ENST00000461437 LINC00477Q96M19 166 aa10.8□□□□□ -0.68
NUP50-213ENST00000461437 MRPL32Q9BYC8 188 aaKnown RBP10.8□□□□□ -0.68
NUP50-213ENST00000461437 KLF12Q9Y4X4 402 aa10.8□□□□□ -0.68
NUP50-213ENST00000461437 C17orf112F2Z3M2 114 aa10.79□□□□□ -0.68
NUP50-213ENST00000461437 GPX1P07203 203 aa10.79□□□□□ -0.68
NUP50-213ENST00000461437 RANP62826 216 aaKnown RBP10.79□□□□□ -0.68
NUP50-213ENST00000461437 C9orf47Q6ZRZ4 202 aa10.79□□□□□ -0.68
NUP50-213ENST00000461437 GNPNAT1Q96EK6 184 aaPredicted RBP10.79□□□□□ -0.68
NUP50-213ENST00000461437 ALG5Q9Y673 324 aa10.79□□□□□ -0.68
NUP50-213ENST00000461437 TRGV1A0A0A0MS02 117 aa10.78□□□□□ -0.68
NUP50-213ENST00000461437 CRISP2P16562 243 aa10.78□□□□□ -0.68
NUP50-213ENST00000461437 UBE2L3P68036 154 aaKnown RBP10.78□□□□□ -0.68
NUP50-213ENST00000461437 TMEM78Q5T7P6 136 aa10.78□□□□□ -0.68
NUP50-213ENST00000461437 C1orf134Q5TEV5 83 aa10.78□□□□□ -0.68
NUP50-213ENST00000461437 SSX7Q7RTT5 188 aa10.78□□□□□ -0.68
NUP50-213ENST00000461437 EIF4E3Q8N5X7 224 aaKnown RBP10.78□□□□□ -0.68
NUP50-213ENST00000461437 Q9H3A6 140 aa10.78□□□□□ -0.68
NUP50-213ENST00000461437 KCNIP2Q9NS61 270 aa10.78□□□□□ -0.68
NUP50-213ENST00000461437 ZNF492Q9P255 531 aa10.78□□□□□ -0.68
NUP50-213ENST00000461437 NBDYA0A0U1RRE5 68 aa10.77□□□□□ -0.69
NUP50-213ENST00000461437 IGHV3-53P01767 116 aa10.77□□□□□ -0.69
NUP50-213ENST00000461437 M6PRP20645 277 aa10.77□□□□□ -0.69
NUP50-213ENST00000461437 CCL18P55774 89 aa10.77□□□□□ -0.69
NUP50-213ENST00000461437 ZNF575Q86XF7 245 aa10.77□□□□□ -0.69
NUP50-213ENST00000461437 MRPL16Q9NX20 251 aaKnown RBP10.77□□□□□ -0.69
NUP50-213ENST00000461437 RPH3ALQ9UNE2 315 aa10.77□□□□□ -0.69
NUP50-213ENST00000461437 TRGV2A0A075B6R0 118 aa10.76□□□□□ -0.69
NUP50-213ENST00000461437 RGS13O14921 159 aa10.76□□□□□ -0.69
NUP50-213ENST00000461437 HMGB3O15347 200 aaKnown RBP10.76□□□□□ -0.69
NUP50-213ENST00000461437 IFNA5P01569 189 aa10.76□□□□□ -0.69
NUP50-213ENST00000461437 RAB2AP61019 212 aa10.76□□□□□ -0.69
NUP50-213ENST00000461437 TNP2Q05952 138 aa10.76□□□□□ -0.69
NUP50-213ENST00000461437 DAZ2Q13117 558 aaKnown RBP10.76□□□□□ -0.69
NUP50-213ENST00000461437 MUC21Q5SSG8 566 aa10.76□□□□□ -0.69
NUP50-213ENST00000461437 SCGB1C1Q8TD33 95 aa10.76□□□□□ -0.69
NUP50-213ENST00000461437 RXFP4Q8TDU9 374 aa10.76□□□□□ -0.69
NUP50-213ENST00000461437 HYLS1Q96M11 299 aa10.76□□□□□ -0.69
NUP50-213ENST00000461437 IGHV1OR15-1A0A075B7D0 117 aa10.75□□□□□ -0.69
NUP50-213ENST00000461437 PET100P0DJ07 73 aa10.75□□□□□ -0.69
NUP50-213ENST00000461437 ZNF138P52744 262 aa10.75□□□□□ -0.69
NUP50-213ENST00000461437 ESRGQ1W209 222 aa10.75□□□□□ -0.69
NUP50-213ENST00000461437 ZNF680Q8NEM1 530 aa10.75□□□□□ -0.69
NUP50-213ENST00000461437 VSIG2Q96IQ7 327 aa10.75□□□□□ -0.69
NUP50-213ENST00000461437 KRTAP1-5Q9BYS1 174 aa10.75□□□□□ -0.69
NUP50-213ENST00000461437 BATF3Q9NR55 127 aa10.75□□□□□ -0.69
NUP50-213ENST00000461437 TCL1AP56279 114 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms