RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 KLF5Q13887 457 aaPredicted RBP13.14□□□□□ -0.31
CDK11A-209ENST00000460465 OR11H1Q8NG94 326 aa13.14□□□□□ -0.31
CDK11A-209ENST00000460465 DAZAP1Q96EP5 407 aaKnown RBP13.14□□□□□ -0.31
CDK11A-209ENST00000460465 C20orf173Q96LM9 149 aa13.14□□□□□ -0.31
CDK11A-209ENST00000460465 CLEC5AQ9NY25 188 aa13.14□□□□□ -0.31
CDK11A-209ENST00000460465 TRAV9-1A0A075B6T8 112 aa13.14□□□□□ -0.31
CDK11A-209ENST00000460465 SMIM27A0A1W2PRY6 76 aa13.14□□□□□ -0.31
CDK11A-209ENST00000460465 RBAKDNA6NC62 111 aa13.14□□□□□ -0.31
CDK11A-209ENST00000460465 SMIM6P0DI80 62 aa13.14□□□□□ -0.31
CDK11A-209ENST00000460465 BTF3L4Q96K17 158 aa13.14□□□□□ -0.31
CDK11A-209ENST00000460465 DUX3Q96PT4 197 aa13.14□□□□□ -0.31
CDK11A-209ENST00000460465 HIVEP2P31629 2446 aa13.14□□□□□ -0.31
CDK11A-209ENST00000460465 P01737 135 aa13.13□□□□□ -0.31
CDK11A-209ENST00000460465 C11orf44Q8N8P7 122 aa13.13□□□□□ -0.31
CDK11A-209ENST00000460465 PRR25Q96S07 402 aa13.13□□□□□ -0.31
CDK11A-209ENST00000460465 RPP21Q9H633 154 aaKnown RBP13.13□□□□□ -0.31
CDK11A-209ENST00000460465 UBE2CO00762 179 aa13.13□□□□□ -0.31
CDK11A-209ENST00000460465 S100A8P05109 93 aa13.13□□□□□ -0.31
CDK11A-209ENST00000460465 CD28P10747 220 aa13.13□□□□□ -0.31
CDK11A-209ENST00000460465 OR1N2Q8NGR9 330 aa13.13□□□□□ -0.31
CDK11A-209ENST00000460465 DPF1Q92782 380 aa13.13□□□□□ -0.31
CDK11A-209ENST00000460465 GSN-AS1Q9NRJ2 163 aa13.13□□□□□ -0.31
CDK11A-209ENST00000460465 SAPCD1Q5SSQ6 148 aa13.12□□□□□ -0.31
CDK11A-209ENST00000460465 ZNF738Q8NE65 137 aa13.12□□□□□ -0.31
CDK11A-209ENST00000460465 NOTCH2Q04721 2471 aa13.12□□□□□ -0.31
CDK11A-209ENST00000460465 C2orf70A6NJV1 201 aa13.12□□□□□ -0.31
CDK11A-209ENST00000460465 HAX1O00165 279 aa13.12□□□□□ -0.31
CDK11A-209ENST00000460465 GPR61Q9BZJ8 451 aa13.12□□□□□ -0.31
CDK11A-209ENST00000460465 NIT2Q9NQR4 276 aa13.12□□□□□ -0.31
CDK11A-209ENST00000460465 NPIPB6E9PJ23 425 aa13.11□□□□□ -0.31
CDK11A-209ENST00000460465 NDUFA7O95182 113 aa13.11□□□□□ -0.31
CDK11A-209ENST00000460465 CBLN1P23435 193 aa13.11□□□□□ -0.31
CDK11A-209ENST00000460465 CRIP1P50238 77 aa13.11□□□□□ -0.31
CDK11A-209ENST00000460465 WFDC12Q8WWY7 111 aa13.11□□□□□ -0.31
CDK11A-209ENST00000460465 CT45A10P0DMU9 189 aa13.11□□□□□ -0.31
CDK11A-209ENST00000460465 TSKUQ8WUA8 353 aa13.11□□□□□ -0.31
CDK11A-209ENST00000460465 PHOX2AO14813 284 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 SPINK4O60575 86 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 FABP9Q0Z7S8 132 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 COX8CQ7Z4L0 72 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 MTORP42345 2549 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 A0A1W2PRX2 142 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 ZNF124Q15973 351 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 CT83Q5H943 113 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 OR4B1Q8NGF8 309 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 FRZBQ92765 325 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 NEU1Q99519 415 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 NDFIP1Q9BT67 221 aa13.1□□□□□ -0.31
CDK11A-209ENST00000460465 IZUMO1RA6ND01 250 aa13.09□□□□□ -0.31
CDK11A-209ENST00000460465 DCANP1Q8TF63 244 aa13.09□□□□□ -0.31
CDK11A-209ENST00000460465 CITED2Q99967 270 aaPredicted RBP13.09□□□□□ -0.31
CDK11A-209ENST00000460465 A8MWL6 223 aa13.08□□□□□ -0.31
CDK11A-209ENST00000460465 ZNF705DP0CH99 300 aaPredicted RBP13.08□□□□□ -0.31
CDK11A-209ENST00000460465 ZNF705BP0CI00 300 aaPredicted RBP13.08□□□□□ -0.31
CDK11A-209ENST00000460465 ACTL10Q5JWF8 245 aa13.08□□□□□ -0.31
CDK11A-209ENST00000460465 TMEM78Q5T7P6 136 aa13.08□□□□□ -0.31
CDK11A-209ENST00000460465 ADAMTSL5Q6ZMM2 481 aa13.08□□□□□ -0.31
CDK11A-209ENST00000460465 C9orf47Q6ZRZ4 202 aa13.08□□□□□ -0.31
CDK11A-209ENST00000460465 WFDC3Q8IUB2 231 aa13.08□□□□□ -0.31
CDK11A-209ENST00000460465 OR2D3Q8NGH3 330 aa13.08□□□□□ -0.31
CDK11A-209ENST00000460465 DLX4Q92988 240 aaPredicted RBP13.08□□□□□ -0.31
CDK11A-209ENST00000460465 NAT8BQ9UHF3 227 aa13.08□□□□□ -0.31
CDK11A-209ENST00000460465 RNF114Q9Y508 228 aa13.08□□□□□ -0.31
CDK11A-209ENST00000460465 TCF21O43680 179 aa13.08□□□□□ -0.32
CDK11A-209ENST00000460465 FRMD6-AS1P0C7T7 363 aa13.08□□□□□ -0.32
CDK11A-209ENST00000460465 SRSF2Q01130 221 aaKnown RBP13.08□□□□□ -0.32
CDK11A-209ENST00000460465 NUP35Q8NFH5 326 aa13.08□□□□□ -0.32
CDK11A-209ENST00000460465 MS4A6AQ9H2W1 248 aa13.08□□□□□ -0.32
CDK11A-209ENST00000460465 HIGD1CA8MV81 97 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 M0QZ24 198 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 SH2D1AO60880 128 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 TRGC1P0CF51 173 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 ZNF138P52744 262 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 DEFB1P60022 68 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 RPL19P84098 196 aaKnown RBP13.07□□□□□ -0.32
CDK11A-209ENST00000460465 RAX2Q96IS3 184 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 PEMTQ9UBM1 199 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 OVOL1O14753 267 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 HIST1H2BKO60814 126 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 HIST1H2BJP06899 126 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 HIST1H2BOP23527 126 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 HIST1H2BBP33778 126 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 TFPI2P48307 235 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 ZNF80P51504 273 aaPredicted RBP13.07□□□□□ -0.32
CDK11A-209ENST00000460465 HIST1H2BDP58876 126 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 HIST1H2BCP62807 126 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 HIST2H2BEQ16778 126 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.07□□□□□ -0.32
CDK11A-209ENST00000460465 FAM162BQ5T6X4 162 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 MRPL54Q6P161 138 aaKnown RBP13.07□□□□□ -0.32
CDK11A-209ENST00000460465 OR9G4Q8NGQ1 327 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 HIST1H2BHQ93079 126 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 HIST1H2BNQ99877 126 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 HIST1H2BMQ99879 126 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 TRAPPC1Q9Y5R8 145 aa13.07□□□□□ -0.32
CDK11A-209ENST00000460465 TSSC4Q9Y5U2 329 aaPredicted RBP13.07□□□□□ -0.32
CDK11A-209ENST00000460465 NF1P21359 2839 aa13.06□□□□□ -0.32
CDK11A-209ENST00000460465 ID1P41134 155 aa13.06□□□□□ -0.32
CDK11A-209ENST00000460465 SAMD13Q5VXD3 122 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms