RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 C3orf79P0CE67 100 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 SLC35B1P78383 322 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 SERF2P84101 59 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 EBI3Q14213 229 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 FAM106AQ4KMX7 169 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 SGK494Q96LW2 274 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 SPANXCQ9NY87 97 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 SOX21Q9Y651 276 aaPredicted RBP8.18□□□□□ -1.1
HERC4-207ENST00000460168 XGP55808 180 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 SLC25A34Q6PIV7 304 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 TREML4Q6UXN2 200 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 C1orf159Q96HA4 380 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 C1RLQ9NZP8 487 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 ZFHX3Q15911 3703 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 C9JAW5 83 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 ISLRO14498 428 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 HBE1P02100 147 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 CSN3P07498 182 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 FABP2P12104 132 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 OPRK1P41145 380 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 FAM120AOSQ5T036 256 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 Q8N6K4 173 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 SSMEM1Q8WWF3 244 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 WNT10AQ9GZT5 417 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 HIGD1AQ9Y241 93 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 WDR83OSQ9Y284 106 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 TIMM9Q9Y5J7 89 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 ZANQ9Y493 2812 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 MPDU1O75352 247 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 AVPP01185 164 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 CRISP2P16562 243 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 ORM2P19652 201 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 ADMP35318 185 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 FXYD3Q14802 87 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 MEIG1Q5JSS6 88 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 TEPPQ6URK8 271 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 CYP2G1PQ6ZSU1 146 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 SPATA12Q7Z6I5 190 aa8.17□□□□□ -1.1
HERC4-207ENST00000460168 CREBBPQ92793 2442 aa8.16□□□□□ -1.1
HERC4-207ENST00000460168 A0A1B0GV50 99 aa8.16□□□□□ -1.1
HERC4-207ENST00000460168 TEX22C9J3V5 150 aa8.16□□□□□ -1.1
HERC4-207ENST00000460168 CRYBB3P26998 211 aa8.16□□□□□ -1.1
HERC4-207ENST00000460168 FAM103A1Q9BTL3 118 aaKnown RBP8.16□□□□□ -1.1
HERC4-207ENST00000460168 VSIRQ9H7M9 311 aa8.16□□□□□ -1.1
HERC4-207ENST00000460168 RPRMQ9NS64 109 aa8.16□□□□□ -1.1
HERC4-207ENST00000460168 OR4C46A6NHA9 309 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 LINC00694P0DN24 101 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 IGHV4-31P0DP07 118 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 CD69Q07108 199 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 RPEL1Q2QD12 228 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 ZNF114Q8NC26 417 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 PRO0628Q9UI54 55 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 ABCA1O95477 2261 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 CR1P17927 2039 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 DEFA4P12838 97 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 CX3CL1P78423 397 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 KLF17Q5JT82 389 aaPredicted RBP8.15□□□□□ -1.1
HERC4-207ENST00000460168 KRTAP1-3Q8IUG1 177 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 ATP6V0E2Q8NHE4 81 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 BAALCQ8WXS3 180 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 ARPC1AQ92747 370 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 MGST2Q99735 147 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 RASL11BQ9BPW5 248 aa8.15□□□□□ -1.1
HERC4-207ENST00000460168 UNC79Q9P2D8 2635 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 TRAV1-1A0A0B4J248 108 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 GRIFINA4D1Z8 144 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 MALP21145 153 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 MLANAQ16655 118 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 Q6Q795 121 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 BAGE3Q86Y29 109 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 BAGE2Q86Y30 109 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 Q8N9W7 124 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 VGLL1Q99990 258 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 PMCHL2Q9BQD1 86 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 C20orf78Q9BR46 151 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 MDFICQ9P1T7 246 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 LSM4Q9Y4Z0 139 aaKnown RBP8.14□□□□□ -1.11
HERC4-207ENST00000460168 F11RQ9Y624 299 aaKnown RBP8.14□□□□□ -1.11
HERC4-207ENST00000460168 CCDC168Q8NDH2 2452 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 LOC107984640A0A0U1RRK4 108 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 GPR183P32249 361 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 EMP1P54849 157 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 TMEM219Q86XT9 240 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 WFDC11Q8NEX6 87 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 KCNS1Q96KK3 526 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 LINC01587Q99440 93 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 KCNIP2Q9NS61 270 aa8.14□□□□□ -1.11
HERC4-207ENST00000460168 FASNP49327 2511 aaKnown RBP8.14□□□□□ -1.11
HERC4-207ENST00000460168 CSPG4Q6UVK1 2322 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 PRRC2AP48634 2157 aaKnown RBP8.13□□□□□ -1.11
HERC4-207ENST00000460168 ITPR2Q14571 2701 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 IGHV3-48P01763 117 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 NDPQ00604 133 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 FOXI1Q12951 378 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 MIC13Q5XKP0 118 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 RPP25LQ8N5L8 163 aaKnown RBP8.13□□□□□ -1.11
HERC4-207ENST00000460168 OR2T6Q8NHC8 308 aa8.13□□□□□ -1.11
HERC4-207ENST00000460168 ZNF502Q8TBZ5 544 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms