RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 PAXXQ9BUH6 204 aa11.42□□□□□ -0.58
COL7A1-203ENST00000459756 SH3BGRL3Q9H299 93 aa11.42□□□□□ -0.58
COL7A1-203ENST00000459756 TIMM8BQ9Y5J9 83 aaPredicted RBP11.42□□□□□ -0.58
COL7A1-203ENST00000459756 FRAS1Q86XX4 4008 aa11.42□□□□□ -0.58
COL7A1-203ENST00000459756 OR7C2O60412 319 aa11.41□□□□□ -0.58
COL7A1-203ENST00000459756 DEFB130BP0DP73 79 aa11.41□□□□□ -0.58
COL7A1-203ENST00000459756 DEFB130AP0DP74 79 aa11.41□□□□□ -0.58
COL7A1-203ENST00000459756 ATP6V0CP27449 155 aa11.41□□□□□ -0.58
COL7A1-203ENST00000459756 ICAM4Q14773 271 aa11.41□□□□□ -0.58
COL7A1-203ENST00000459756 CCDC28AQ8IWP9 274 aa11.41□□□□□ -0.58
COL7A1-203ENST00000459756 POM121L12Q8N7R1 296 aa11.41□□□□□ -0.58
COL7A1-203ENST00000459756 RNF141Q8WVD5 230 aa11.41□□□□□ -0.58
COL7A1-203ENST00000459756 TRAV12-3A0A0B4J271 114 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 J3KRW8 73 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 SLC25A5P05141 298 aaKnown RBP11.4□□□□□ -0.58
COL7A1-203ENST00000459756 OR10J4P0C629 311 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 RAB2AP61019 212 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 CD300CQ08708 224 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 ERCC8Q13216 396 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 FAM122CQ6P4D5 195 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 C9orf47Q6ZRZ4 202 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 TCTE3Q8IZS6 198 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 ARPC5LQ9BPX5 153 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 AGPAT4-IT1Q9H0P7 198 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 BIRC6Q9NR09 4857 aa11.4□□□□□ -0.58
COL7A1-203ENST00000459756 CBY3A6NI87 242 aa11.39□□□□□ -0.59
COL7A1-203ENST00000459756 HMSDA8MTL9 139 aa11.39□□□□□ -0.59
COL7A1-203ENST00000459756 PFDN1O60925 122 aa11.39□□□□□ -0.59
COL7A1-203ENST00000459756 TAS2R45P59539 299 aa11.39□□□□□ -0.59
COL7A1-203ENST00000459756 ZNF345Q14585 488 aa11.39□□□□□ -0.59
COL7A1-203ENST00000459756 ACOT6Q3I5F7 207 aaPredicted RBP11.39□□□□□ -0.59
COL7A1-203ENST00000459756 KHDC3LQ587J8 217 aa11.39□□□□□ -0.59
COL7A1-203ENST00000459756 TMEM88Q6PEY1 159 aa11.39□□□□□ -0.59
COL7A1-203ENST00000459756 KCNRGQ8N5I3 272 aa11.39□□□□□ -0.59
COL7A1-203ENST00000459756 FAM19A4Q96LR4 140 aa11.39□□□□□ -0.59
COL7A1-203ENST00000459756 PYGO2Q9BRQ0 406 aa11.39□□□□□ -0.59
COL7A1-203ENST00000459756 KANTRA0A1W2PQU2 76 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 C7orf71A4D174 169 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 KLLNB2CW77 178 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 TAAR5O14804 337 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 ATP5G1P05496 136 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 NMBP08949 121 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 ATP5G3P48201 142 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 UBE2L3P68036 154 aaKnown RBP11.38□□□□□ -0.59
COL7A1-203ENST00000459756 TMEM78Q5T7P6 136 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 C15orf53Q8NAA6 179 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 OR10G4Q8NGN3 311 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 OR10G9Q8NGN4 311 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 OR10G7Q8NGN6 311 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 ZNF503Q96F45 646 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 PHYHIPLQ96FC7 376 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 NOP10Q9NPE3 64 aaKnown RBP11.38□□□□□ -0.59
COL7A1-203ENST00000459756 CYTL1Q9NRR1 136 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 DNAH10Q8IVF4 4471 aa11.38□□□□□ -0.59
COL7A1-203ENST00000459756 IGKV2-40A0A087WW87 121 aaPredicted RBP11.37□□□□□ -0.59
COL7A1-203ENST00000459756 A0A0D9SG52 128 aa11.37□□□□□ -0.59
COL7A1-203ENST00000459756 A0A1W2PPV4 95 aa11.37□□□□□ -0.59
COL7A1-203ENST00000459756 HMGB3O15347 200 aaKnown RBP11.37□□□□□ -0.59
COL7A1-203ENST00000459756 BCL2L11O43521 198 aa11.37□□□□□ -0.59
COL7A1-203ENST00000459756 IGKV2D-40P01614 121 aaPredicted RBP11.37□□□□□ -0.59
COL7A1-203ENST00000459756 CRISP2P16562 243 aa11.37□□□□□ -0.59
COL7A1-203ENST00000459756 M6PRP20645 277 aa11.37□□□□□ -0.59
COL7A1-203ENST00000459756 CSN1S1P47710 185 aa11.37□□□□□ -0.59
COL7A1-203ENST00000459756 RANP62826 216 aaKnown RBP11.37□□□□□ -0.59
COL7A1-203ENST00000459756 OR2G3Q8NGZ4 309 aa11.37□□□□□ -0.59
COL7A1-203ENST00000459756 PSMG3Q9BT73 122 aaPredicted RBP11.37□□□□□ -0.59
COL7A1-203ENST00000459756 ZNF471Q9BX82 626 aaPredicted RBP11.37□□□□□ -0.59
COL7A1-203ENST00000459756 SNURFLB1AK76 121 aa11.36□□□□□ -0.59
COL7A1-203ENST00000459756 F5H768 121 aa11.36□□□□□ -0.59
COL7A1-203ENST00000459756 C1QBP02746 253 aa11.36□□□□□ -0.59
COL7A1-203ENST00000459756 GPX1P07203 203 aa11.36□□□□□ -0.59
COL7A1-203ENST00000459756 TMUB2Q71RG4 321 aa11.36□□□□□ -0.59
COL7A1-203ENST00000459756 UBE2DNLQ8IWF7 75 aa11.36□□□□□ -0.59
COL7A1-203ENST00000459756 GNPNAT1Q96EK6 184 aaPredicted RBP11.36□□□□□ -0.59
COL7A1-203ENST00000459756 VGLL1Q99990 258 aa11.36□□□□□ -0.59
COL7A1-203ENST00000459756 TRBV7-9A0A0J9YWB2 115 aa11.35□□□□□ -0.59
COL7A1-203ENST00000459756 ZNF324O75467 553 aaPredicted RBP11.35□□□□□ -0.59
COL7A1-203ENST00000459756 RNASE4P34096 147 aaKnown RBP11.35□□□□□ -0.59
COL7A1-203ENST00000459756 RNF212Q495C1 297 aa11.35□□□□□ -0.59
COL7A1-203ENST00000459756 LINC00612Q8N6U2 182 aa11.35□□□□□ -0.59
COL7A1-203ENST00000459756 LINC00467Q9BRT7 94 aa11.35□□□□□ -0.59
COL7A1-203ENST00000459756 Q9H3A6 140 aa11.35□□□□□ -0.59
COL7A1-203ENST00000459756 ZNF492Q9P255 531 aa11.35□□□□□ -0.59
COL7A1-203ENST00000459756 RBAKDNA6NC62 111 aa11.34□□□□□ -0.59
COL7A1-203ENST00000459756 CDC34P49427 236 aaPredicted RBP11.34□□□□□ -0.59
COL7A1-203ENST00000459756 ZNF138P52744 262 aa11.34□□□□□ -0.59
COL7A1-203ENST00000459756 BTN1A1Q13410 526 aa11.34□□□□□ -0.59
COL7A1-203ENST00000459756 ZFP69Q49AA0 526 aa11.34□□□□□ -0.59
COL7A1-203ENST00000459756 PQLC2Q6ZP29 291 aa11.34□□□□□ -0.59
COL7A1-203ENST00000459756 ZFAND2AQ8N6M9 145 aa11.34□□□□□ -0.59
COL7A1-203ENST00000459756 ZNF680Q8NEM1 530 aa11.34□□□□□ -0.59
COL7A1-203ENST00000459756 RXFP4Q8TDU9 374 aa11.34□□□□□ -0.59
COL7A1-203ENST00000459756 SERF2P84101 59 aa11.33□□□□□ -0.6
COL7A1-203ENST00000459756 DAZ2Q13117 558 aaKnown RBP11.33□□□□□ -0.6
COL7A1-203ENST00000459756 LGALSLQ3ZCW2 172 aaPredicted RBP11.33□□□□□ -0.6
COL7A1-203ENST00000459756 AKR1C8PQ5T2L2 129 aa11.33□□□□□ -0.6
COL7A1-203ENST00000459756 HYLS1Q96M11 299 aa11.33□□□□□ -0.6
COL7A1-203ENST00000459756 OTORQ9NRC9 128 aa11.33□□□□□ -0.6
COL7A1-203ENST00000459756 MBP02144 154 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms