RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ERCC8Q13216 396 aa11.59□□□□□ -0.55
CD28-203ENST00000458610 AKR1C8PQ5T2L2 129 aa11.59□□□□□ -0.55
CD28-203ENST00000458610 TMEM167BQ9NRX6 74 aa11.59□□□□□ -0.55
CD28-203ENST00000458610 DKK2Q9UBU2 259 aa11.59□□□□□ -0.55
CD28-203ENST00000458610 YTHDF2Q9Y5A9 579 aaKnown RBP11.59□□□□□ -0.55
CD28-203ENST00000458610 KANTRA0A1W2PQU2 76 aa11.58□□□□□ -0.56
CD28-203ENST00000458610 PGPA6NDG6 321 aa11.58□□□□□ -0.56
CD28-203ENST00000458610 HMGB3O15347 200 aaKnown RBP11.58□□□□□ -0.56
CD28-203ENST00000458610 ARL14EPLP0DKL9 152 aa11.58□□□□□ -0.56
CD28-203ENST00000458610 HTN1P15515 57 aa11.58□□□□□ -0.56
CD28-203ENST00000458610 ZNF138P52744 262 aa11.58□□□□□ -0.56
CD28-203ENST00000458610 C12orf74Q32Q52 190 aa11.58□□□□□ -0.56
CD28-203ENST00000458610 GFI1BQ5VTD9 330 aa11.58□□□□□ -0.56
CD28-203ENST00000458610 C16orf74Q96GX8 76 aa11.58□□□□□ -0.56
CD28-203ENST00000458610 ZNF492Q9P255 531 aa11.58□□□□□ -0.56
CD28-203ENST00000458610 IGKV2-40A0A087WW87 121 aaPredicted RBP11.57□□□□□ -0.56
CD28-203ENST00000458610 LYRM9A8MSI8 78 aa11.57□□□□□ -0.56
CD28-203ENST00000458610 IGKV2D-40P01614 121 aaPredicted RBP11.57□□□□□ -0.56
CD28-203ENST00000458610 GPX1P07203 203 aa11.57□□□□□ -0.56
CD28-203ENST00000458610 CRISP2P16562 243 aa11.57□□□□□ -0.56
CD28-203ENST00000458610 FAM222AQ5U5X8 452 aa11.57□□□□□ -0.56
CD28-203ENST00000458610 Q6ZTC4 211 aa11.57□□□□□ -0.56
CD28-203ENST00000458610 HYLS1Q96M11 299 aa11.57□□□□□ -0.56
CD28-203ENST00000458610 PYGO2Q9BRQ0 406 aa11.57□□□□□ -0.56
CD28-203ENST00000458610 CYTL1Q9NRR1 136 aa11.57□□□□□ -0.56
CD28-203ENST00000458610 CELA1Q9UNI1 258 aa11.57□□□□□ -0.56
CD28-203ENST00000458610 DEFB131BA0A096LNP1 70 aa11.56□□□□□ -0.56
CD28-203ENST00000458610 TRAV12-3A0A0B4J271 114 aa11.56□□□□□ -0.56
CD28-203ENST00000458610 CTXND1A0A1B0GTU2 59 aa11.56□□□□□ -0.56
CD28-203ENST00000458610 A0A1B0GVG6 124 aa11.56□□□□□ -0.56
CD28-203ENST00000458610 C7orf71A4D174 169 aa11.56□□□□□ -0.56
CD28-203ENST00000458610 DIRC3C9JPN6 131 aa11.56□□□□□ -0.56
CD28-203ENST00000458610 J3KRW8 73 aa11.56□□□□□ -0.56
CD28-203ENST00000458610 EIF3GO75821 320 aaKnown RBP eCLIP11.56□□□□□ -0.56
CD28-203ENST00000458610 GCHFRP30047 84 aa11.56□□□□□ -0.56
CD28-203ENST00000458610 FAM19A4Q96LR4 140 aa11.56□□□□□ -0.56
CD28-203ENST00000458610 VGLL1Q99990 258 aa11.56□□□□□ -0.56
CD28-203ENST00000458610 LENEPQ9Y5L5 61 aa11.56□□□□□ -0.56
CD28-203ENST00000458610 SERTM2A0A1B0GWG4 89 aa11.55□□□□□ -0.56
CD28-203ENST00000458610 KLLNB2CW77 178 aa11.55□□□□□ -0.56
CD28-203ENST00000458610 K7EQM0 130 aa11.55□□□□□ -0.56
CD28-203ENST00000458610 RNASE4P34096 147 aaKnown RBP11.55□□□□□ -0.56
CD28-203ENST00000458610 DAD1P61803 113 aa11.55□□□□□ -0.56
CD28-203ENST00000458610 SUN5Q8TC36 379 aa11.55□□□□□ -0.56
CD28-203ENST00000458610 TMEM263Q8WUH6 116 aaKnown RBP11.55□□□□□ -0.56
CD28-203ENST00000458610 TMED6Q8WW62 240 aa11.55□□□□□ -0.56
CD28-203ENST00000458610 ST6GAL2Q96JF0 529 aa11.55□□□□□ -0.56
CD28-203ENST00000458610 TIMM8BQ9Y5J9 83 aaPredicted RBP11.55□□□□□ -0.56
CD28-203ENST00000458610 IGLL5B9A064 214 aa11.54□□□□□ -0.56
CD28-203ENST00000458610 BCL2L11O43521 198 aa11.54□□□□□ -0.56
CD28-203ENST00000458610 AZU1P20160 251 aa11.54□□□□□ -0.56
CD28-203ENST00000458610 KIR3DS1Q14943 382 aa11.54□□□□□ -0.56
CD28-203ENST00000458610 IQCF2Q8IXL9 164 aa11.54□□□□□ -0.56
CD28-203ENST00000458610 OR11H4Q8NGC9 324 aa11.54□□□□□ -0.56
CD28-203ENST00000458610 STOML3Q8TAV4 291 aa11.54□□□□□ -0.56
CD28-203ENST00000458610 ZNF471Q9BX82 626 aaPredicted RBP11.54□□□□□ -0.56
CD28-203ENST00000458610 UMAD1C9J7I0 102 aa11.53□□□□□ -0.56
CD28-203ENST00000458610 SEC11BP0C7V7 166 aa11.53□□□□□ -0.56
CD28-203ENST00000458610 ZNF767PQ75MW2 155 aa11.53□□□□□ -0.56
CD28-203ENST00000458610 TCTE3Q8IZS6 198 aa11.53□□□□□ -0.56
CD28-203ENST00000458610 C5orf17Q8NAS9 161 aa11.53□□□□□ -0.56
CD28-203ENST00000458610 FAM210BQ96KR6 192 aa11.53□□□□□ -0.56
CD28-203ENST00000458610 LINC00467Q9BRT7 94 aa11.53□□□□□ -0.56
CD28-203ENST00000458610 NKX6-2Q9C056 277 aaPredicted RBP11.53□□□□□ -0.56
CD28-203ENST00000458610 SNURFLB1AK76 121 aa11.52□□□□□ -0.57
CD28-203ENST00000458610 PRM2P04554 102 aa11.52□□□□□ -0.57
CD28-203ENST00000458610 ZFAND2AQ8N6M9 145 aa11.52□□□□□ -0.57
CD28-203ENST00000458610 ZNF680Q8NEM1 530 aa11.52□□□□□ -0.57
CD28-203ENST00000458610 RPH3ALQ9UNE2 315 aa11.52□□□□□ -0.57
CD28-203ENST00000458610 hCG_2014768A0A024R1R8 64 aa11.51□□□□□ -0.57
CD28-203ENST00000458610 A0A1W2PRE2 83 aa11.51□□□□□ -0.57
CD28-203ENST00000458610 FBLL1A6NHQ2 334 aaKnown RBP11.51□□□□□ -0.57
CD28-203ENST00000458610 RGS13O14921 159 aa11.51□□□□□ -0.57
CD28-203ENST00000458610 ZNF324O75467 553 aaPredicted RBP11.51□□□□□ -0.57
CD28-203ENST00000458610 LY6G6CO95867 125 aa11.51□□□□□ -0.57
CD28-203ENST00000458610 SUMO1P63165 101 aaKnown RBP11.51□□□□□ -0.57
CD28-203ENST00000458610 CD300CQ08708 224 aa11.51□□□□□ -0.57
CD28-203ENST00000458610 EIF5AL1Q6IS14 154 aaKnown RBP11.51□□□□□ -0.57
CD28-203ENST00000458610 GOLT1AQ6ZVE7 132 aa11.51□□□□□ -0.57
CD28-203ENST00000458610 TMUB2Q71RG4 321 aa11.51□□□□□ -0.57
CD28-203ENST00000458610 EIF4E3Q8N5X7 224 aaKnown RBP11.51□□□□□ -0.57
CD28-203ENST00000458610 RNASE8Q8TDE3 154 aaKnown RBP11.51□□□□□ -0.57
CD28-203ENST00000458610 LINC00476Q8WZB0 136 aa11.51□□□□□ -0.57
CD28-203ENST00000458610 NDFIP1Q9BT67 221 aa11.51□□□□□ -0.57
CD28-203ENST00000458610 IGHV4-4A0A075B6R2 117 aa11.5□□□□□ -0.57
CD28-203ENST00000458610 CBY3A6NI87 242 aa11.5□□□□□ -0.57
CD28-203ENST00000458610 DEFB130BP0DP73 79 aa11.5□□□□□ -0.57
CD28-203ENST00000458610 DEFB130AP0DP74 79 aa11.5□□□□□ -0.57
CD28-203ENST00000458610 TPT1P13693 172 aaKnown RBP11.5□□□□□ -0.57
CD28-203ENST00000458610 BTN1A1Q13410 526 aa11.5□□□□□ -0.57
CD28-203ENST00000458610 ANXA2RQ3ZCQ2 193 aa11.5□□□□□ -0.57
CD28-203ENST00000458610 DPPA3Q6W0C5 159 aa11.5□□□□□ -0.57
CD28-203ENST00000458610 Q8TAT8 98 aa11.5□□□□□ -0.57
CD28-203ENST00000458610 NDUFAF3Q9BU61 184 aa11.5□□□□□ -0.57
CD28-203ENST00000458610 NOP10Q9NPE3 64 aaKnown RBP11.5□□□□□ -0.57
CD28-203ENST00000458610 PLAC8L1A1L4L8 177 aa11.49□□□□□ -0.57
CD28-203ENST00000458610 MAP1LC3B2A6NCE7 125 aa11.49□□□□□ -0.57
CD28-203ENST00000458610 TCRAP04437 139 aa11.49□□□□□ -0.57
CD28-203ENST00000458610 ZNF726P1Q15940 193 aa11.49□□□□□ -0.57
CD28-203ENST00000458610 LGALS9CQ6DKI2 356 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms