RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 LTAP01374 205 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 RBMY1DP0C7P1 496 aaKnown RBP6.51□□□□□ -1.37
RIF1-208ENST00000457745 FRMD6-AS1P0C7T7 363 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 ZNF688P0C7X2 276 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 CNN1P51911 297 aaKnown RBP6.51□□□□□ -1.37
RIF1-208ENST00000457745 RPL11P62913 178 aaKnown RBP6.51□□□□□ -1.37
RIF1-208ENST00000457745 PSG9Q00887 426 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 FOXL1Q12952 345 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 LYPD1Q8N2G4 141 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 HIST1H2BAQ96A08 127 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 C16orf92Q96LL3 132 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 SLC50A1Q9BRV3 221 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 NIPSNAP3BQ9BS92 247 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 KRTAP9-9Q9BYP9 154 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 KRTAP9-4Q9BYQ2 154 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 RNASE7Q9H1E1 156 aaKnown RBP6.51□□□□□ -1.37
RIF1-208ENST00000457745 RPS10P5Q9NQ39 176 aa6.51□□□□□ -1.37
RIF1-208ENST00000457745 A0A1W2PS18 150 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 TSPAN4O14817 238 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 CA1P00915 261 aaPredicted RBP6.5□□□□□ -1.37
RIF1-208ENST00000457745 GCGP01275 180 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 GNG4P50150 75 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 TAS2R60P59551 318 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 FLI1Q01543 452 aaPredicted RBP6.5□□□□□ -1.37
RIF1-208ENST00000457745 BAGE2Q86Y30 109 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 TMEM75Q8N9X5 138 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 ZNF738Q8NE65 137 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 CMTM2Q8TAZ6 248 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 GRAMD2BQ96HH9 432 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 WFDC10AQ9H1F0 79 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 C11orf21Q9P2W6 132 aa6.5□□□□□ -1.37
RIF1-208ENST00000457745 ZNF256Q9Y2P7 627 aaPredicted RBP6.5□□□□□ -1.37
RIF1-208ENST00000457745 VWFP04275 2813 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 TRBV6-1A0A0K0K1D8 114 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 C19orf71A6NCJ1 209 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 KNCNA6PVL3 124 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 NPIPB6E9PJ23 425 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 SNAPINO95295 136 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 CXCL1P09341 107 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 CT45A10P0DMU9 189 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 MGST1P10620 155 aaKnown RBP6.49□□□□□ -1.37
RIF1-208ENST00000457745 RPL19P84098 196 aaKnown RBP6.49□□□□□ -1.37
RIF1-208ENST00000457745 ODF3L2Q3SX64 289 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 PSMG4Q5JS54 123 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 PRR31Q5SQ13 230 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.49□□□□□ -1.37
RIF1-208ENST00000457745 MRPL53Q96EL3 112 aaKnown RBP6.49□□□□□ -1.37
RIF1-208ENST00000457745 AAMDCQ9H7C9 122 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 V9GYV3 84 aa6.49□□□□□ -1.37
RIF1-208ENST00000457745 TGIF2-C20orf24A0A0A6YYL0 155 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 A0A1B0GUS0 222 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 COLCA2A8K830 154 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 PFN1P07737 140 aaKnown RBP6.48□□□□□ -1.37
RIF1-208ENST00000457745 GZMBP10144 247 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 UBE2G1P62253 170 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 RHEBQ15382 184 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 PRR27Q6MZM9 219 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 S100A7AQ86SG5 101 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 TMEM183AQ8IXX5 376 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 ZFAND2AQ8N6M9 145 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 NUDT10Q8NFP7 164 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 NUDT11Q96G61 164 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 FMC1Q96HJ9 113 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 FAM19A4Q96LR4 140 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 PRR25Q96S07 402 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 TCEAL7Q9BRU2 100 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 MAP6D1Q9H9H5 199 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 PEMTQ9UBM1 199 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 RNF24Q9Y225 148 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 LY96Q9Y6Y9 160 aa6.48□□□□□ -1.37
RIF1-208ENST00000457745 STAB1Q9NY15 2570 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 A0A087WWC5 75 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 J3KRW8 73 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 SAP30O75446 220 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 IGKV3-20P01619 116 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 IGLV1-51P01701 117 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 CD7P09564 240 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 DEFB131AP59861 70 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 HIST1H1AQ02539 215 aaPredicted RBP6.47□□□□□ -1.37
RIF1-208ENST00000457745 PNRC1Q12796 327 aaPredicted RBP6.47□□□□□ -1.37
RIF1-208ENST00000457745 AMTNQ6UX39 209 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 C9orf47Q6ZRZ4 202 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 APRG1Q8IVJ8 170 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 OR8A1Q8NGG7 326 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 DYNLRB2Q8TF09 96 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 SFRP2Q96HF1 295 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 C19orf73Q9NVV2 129 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 ZNF492Q9P255 531 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 PRELID1Q9Y255 219 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 URGCP-MRPS24S4R325 110 aa6.47□□□□□ -1.37
RIF1-208ENST00000457745 A0A0J9YX75 114 aa6.46□□□□□ -1.38
RIF1-208ENST00000457745 SH2D1AO60880 128 aa6.46□□□□□ -1.38
RIF1-208ENST00000457745 RBMY1A1P0DJD3 496 aaKnown RBP6.46□□□□□ -1.38
RIF1-208ENST00000457745 RBMY1CP0DJD4 496 aa6.46□□□□□ -1.38
RIF1-208ENST00000457745 MEOX2P50222 304 aa6.46□□□□□ -1.38
RIF1-208ENST00000457745 TCL1AP56279 114 aa6.46□□□□□ -1.38
RIF1-208ENST00000457745 FAM3BP58499 235 aaPredicted RBP6.46□□□□□ -1.38
RIF1-208ENST00000457745 FXYD7P58549 80 aa6.46□□□□□ -1.38
RIF1-208ENST00000457745 ELOBQ15370 118 aa6.46□□□□□ -1.38
RIF1-208ENST00000457745 RBMY1FQ15415 496 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms