RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 LINC00477Q96M19 166 aa10.24□□□□□ -0.77
SMPD4-215ENST00000457039 TRAV12-2A0A075B6T6 113 aa10.23□□□□□ -0.77
SMPD4-215ENST00000457039 RBMY1A1P0DJD3 496 aaKnown RBP10.23□□□□□ -0.77
SMPD4-215ENST00000457039 RBMY1CP0DJD4 496 aa10.23□□□□□ -0.77
SMPD4-215ENST00000457039 KIR3DS1Q14943 382 aa10.23□□□□□ -0.77
SMPD4-215ENST00000457039 RBMY1FQ15415 496 aaKnown RBP10.23□□□□□ -0.77
SMPD4-215ENST00000457039 CMTM2Q8TAZ6 248 aa10.23□□□□□ -0.77
SMPD4-215ENST00000457039 SFT2D1Q8WV19 159 aa10.23□□□□□ -0.77
SMPD4-215ENST00000457039 WWC2-AS2Q96NR7 200 aa10.23□□□□□ -0.77
SMPD4-215ENST00000457039 PPP1R14DQ9NXH3 145 aa10.23□□□□□ -0.77
SMPD4-215ENST00000457039 YTHDF2Q9Y5A9 579 aaKnown RBP10.23□□□□□ -0.77
SMPD4-215ENST00000457039 FAM74A7A6NL05 159 aa10.22□□□□□ -0.77
SMPD4-215ENST00000457039 INSP01308 110 aa10.22□□□□□ -0.77
SMPD4-215ENST00000457039 H2AFB1P0C5Y9 115 aa10.22□□□□□ -0.77
SMPD4-215ENST00000457039 CRISP2P16562 243 aa10.22□□□□□ -0.77
SMPD4-215ENST00000457039 SUMO1P63165 101 aaKnown RBP10.22□□□□□ -0.77
SMPD4-215ENST00000457039 GNG5P63218 68 aa10.22□□□□□ -0.77
SMPD4-215ENST00000457039 Q8NAQ8 132 aa10.22□□□□□ -0.77
SMPD4-215ENST00000457039 C5orf17Q8NAS9 161 aa10.22□□□□□ -0.77
SMPD4-215ENST00000457039 NEU1Q99519 415 aa10.22□□□□□ -0.77
SMPD4-215ENST00000457039 ZNF492Q9P255 531 aa10.22□□□□□ -0.77
SMPD4-215ENST00000457039 TRAV1-1A0A0B4J248 108 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 TRBV7-9A0A0J9YWB2 115 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 A0A0J9YWU9 116 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 KLLNB2CW77 178 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 TCRAP04437 139 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 MIFP14174 115 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 TSPOP30536 169 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 LEPP41159 167 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 UBE2G2P60604 165 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 TMEM78Q5T7P6 136 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 GFI1BQ5VTD9 330 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 C11orf68Q9H3H3 251 aaKnown RBP10.21□□□□□ -0.77
SMPD4-215ENST00000457039 GOLT1BQ9Y3E0 138 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 ARL2-SNX15V9GYD0 113 aa10.21□□□□□ -0.77
SMPD4-215ENST00000457039 NMBP08949 121 aa10.2□□□□□ -0.78
SMPD4-215ENST00000457039 ZNF138P52744 262 aa10.2□□□□□ -0.78
SMPD4-215ENST00000457039 GOLT1AQ6ZVE7 132 aa10.2□□□□□ -0.78
SMPD4-215ENST00000457039 CCDC28AQ8IWP9 274 aa10.2□□□□□ -0.78
SMPD4-215ENST00000457039 ZFAND2AQ8N6M9 145 aa10.2□□□□□ -0.78
SMPD4-215ENST00000457039 Q8TAT8 98 aa10.2□□□□□ -0.78
SMPD4-215ENST00000457039 C20orf144Q9BQM9 153 aa10.2□□□□□ -0.78
SMPD4-215ENST00000457039 NKX6-2Q9C056 277 aaPredicted RBP10.2□□□□□ -0.78
SMPD4-215ENST00000457039 EPDR1Q9UM22 224 aa10.2□□□□□ -0.78
SMPD4-215ENST00000457039 RPH3ALQ9UNE2 315 aa10.2□□□□□ -0.78
SMPD4-215ENST00000457039 IGHV4-28A0A0C4DH34 117 aa10.19□□□□□ -0.78
SMPD4-215ENST00000457039 A0A1B0GV50 99 aa10.19□□□□□ -0.78
SMPD4-215ENST00000457039 SERTM2A0A1B0GWG4 89 aa10.19□□□□□ -0.78
SMPD4-215ENST00000457039 SMIM9A6NGZ8 99 aa10.19□□□□□ -0.78
SMPD4-215ENST00000457039 CCL20P78556 96 aa10.19□□□□□ -0.78
SMPD4-215ENST00000457039 ALKAL2Q6UX46 152 aa10.19□□□□□ -0.78
SMPD4-215ENST00000457039 STARD9Q9P2P6 4700 aa10.19□□□□□ -0.78
SMPD4-215ENST00000457039 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
SMPD4-215ENST00000457039 TRAV8-1A0A0A6YYK1 113 aa10.18□□□□□ -0.78
SMPD4-215ENST00000457039 DEFB4AO15263 64 aa10.18□□□□□ -0.78
SMPD4-215ENST00000457039 IGLV2-11P01706 119 aa10.18□□□□□ -0.78
SMPD4-215ENST00000457039 PRR9Q5T870 116 aa10.18□□□□□ -0.78
SMPD4-215ENST00000457039 TMEM256Q8N2U0 113 aa10.18□□□□□ -0.78
SMPD4-215ENST00000457039 CYB561D1Q8N8Q1 229 aa10.18□□□□□ -0.78
SMPD4-215ENST00000457039 ATG101Q9BSB4 218 aa10.18□□□□□ -0.78
SMPD4-215ENST00000457039 LENEPQ9Y5L5 61 aa10.18□□□□□ -0.78
SMPD4-215ENST00000457039 C7orf71A4D174 169 aa10.17□□□□□ -0.78
SMPD4-215ENST00000457039 J3KRW8 73 aa10.17□□□□□ -0.78
SMPD4-215ENST00000457039 PAGE4O60829 102 aa10.17□□□□□ -0.78
SMPD4-215ENST00000457039 ZNF324O75467 553 aaPredicted RBP10.17□□□□□ -0.78
SMPD4-215ENST00000457039 ATP5G3P48201 142 aa10.17□□□□□ -0.78
SMPD4-215ENST00000457039 PPT1P50897 306 aa10.17□□□□□ -0.78
SMPD4-215ENST00000457039 BTN1A1Q13410 526 aa10.17□□□□□ -0.78
SMPD4-215ENST00000457039 TVP23CQ96ET8 276 aa10.17□□□□□ -0.78
SMPD4-215ENST00000457039 TCEAL7Q9BRU2 100 aa10.17□□□□□ -0.78
SMPD4-215ENST00000457039 TMEM208Q9BTX3 173 aa10.17□□□□□ -0.78
SMPD4-215ENST00000457039 DYNC2H1Q8NCM8 4307 aaKnown RBP10.17□□□□□ -0.78
SMPD4-215ENST00000457039 CSMD3Q7Z407 3707 aa10.16□□□□□ -0.78
SMPD4-215ENST00000457039 TRAV12-3A0A0B4J271 114 aa10.16□□□□□ -0.78
SMPD4-215ENST00000457039 H7BYZ3 331 aa10.16□□□□□ -0.78
SMPD4-215ENST00000457039 PEX7O00628 323 aa10.16□□□□□ -0.78
SMPD4-215ENST00000457039 HBE1P02100 147 aa10.16□□□□□ -0.78
SMPD4-215ENST00000457039 PRM2P04554 102 aa10.16□□□□□ -0.78
SMPD4-215ENST00000457039 PMS2P11Q13670 270 aa10.16□□□□□ -0.78
SMPD4-215ENST00000457039 TMEM75Q8N9X5 138 aa10.16□□□□□ -0.78
SMPD4-215ENST00000457039 HIST1H2BAQ96A08 127 aa10.16□□□□□ -0.78
SMPD4-215ENST00000457039 SGK494Q96LW2 274 aa10.16□□□□□ -0.78
SMPD4-215ENST00000457039 LINC01587Q99440 93 aa10.16□□□□□ -0.78
SMPD4-215ENST00000457039 ZNF705GA8MUZ8 300 aaPredicted RBP10.15□□□□□ -0.78
SMPD4-215ENST00000457039 K7EQM0 130 aa10.15□□□□□ -0.78
SMPD4-215ENST00000457039 IFNA7P01567 189 aa10.15□□□□□ -0.78
SMPD4-215ENST00000457039 GPX1P07203 203 aa10.15□□□□□ -0.78
SMPD4-215ENST00000457039 TAS2R60P59551 318 aa10.15□□□□□ -0.78
SMPD4-215ENST00000457039 RRN3P1Q2M238 152 aa10.15□□□□□ -0.78
SMPD4-215ENST00000457039 CST9LP1Q5W188 147 aa10.15□□□□□ -0.78
SMPD4-215ENST00000457039 IL17DQ8TAD2 202 aa10.15□□□□□ -0.78
SMPD4-215ENST00000457039 MUC7Q8TAX7 377 aa10.15□□□□□ -0.78
SMPD4-215ENST00000457039 LINC00479Q96M42 142 aa10.15□□□□□ -0.78
SMPD4-215ENST00000457039 MANBALQ9NQG1 85 aa10.15□□□□□ -0.78
SMPD4-215ENST00000457039 PSG8Q9UQ74 426 aa10.15□□□□□ -0.78
SMPD4-215ENST00000457039 LOC102723971A0A1B0GUV8 181 aa10.14□□□□□ -0.79
SMPD4-215ENST00000457039 FBLL1A6NHQ2 334 aaKnown RBP10.14□□□□□ -0.79
SMPD4-215ENST00000457039 TEX46H3BTG2 121 aa10.14□□□□□ -0.79
SMPD4-215ENST00000457039 AZU1P20160 251 aa10.14□□□□□ -0.79
SMPD4-215ENST00000457039 RNASE4P34096 147 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms