RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TMED6Q8WW62 240 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 MBD3L1Q8WWY6 194 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 LINC00477Q96M19 166 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 VGLL1Q99990 258 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 OTORQ9NRC9 128 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 TMEM167BQ9NRX6 74 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 X6R8D5 127 aa7.28□□□□□ -1.24
ATG4A-206ENST00000457035 DIRC3C9JPN6 131 aa7.27□□□□□ -1.25
ATG4A-206ENST00000457035 BOLA2-SMG1P6H3BVE0 249 aa7.27□□□□□ -1.25
ATG4A-206ENST00000457035 AMBPP02760 352 aa7.27□□□□□ -1.25
ATG4A-206ENST00000457035 NKX2-5P52952 324 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-206ENST00000457035 FGF8P55075 233 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-206ENST00000457035 KIR3DS1Q14943 382 aa7.27□□□□□ -1.25
ATG4A-206ENST00000457035 ARL6IP6Q8N6S5 226 aa7.27□□□□□ -1.25
ATG4A-206ENST00000457035 RXFP4Q8TDU9 374 aa7.27□□□□□ -1.25
ATG4A-206ENST00000457035 FAM19A4Q96LR4 140 aa7.27□□□□□ -1.25
ATG4A-206ENST00000457035 IGF2BP2-AS1Q96M15 143 aa7.27□□□□□ -1.25
ATG4A-206ENST00000457035 ODF3Q96PU9 254 aa7.27□□□□□ -1.25
ATG4A-206ENST00000457035 NEU1Q99519 415 aa7.27□□□□□ -1.25
ATG4A-206ENST00000457035 PLECQ15149 4684 aaKnown RBP7.27□□□□□ -1.25
ATG4A-206ENST00000457035 DYNC2H1Q8NCM8 4307 aaKnown RBP7.26□□□□□ -1.25
ATG4A-206ENST00000457035 TRAV12-2A0A075B6T6 113 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 IGKV2-40A0A087WW87 121 aaPredicted RBP7.26□□□□□ -1.25
ATG4A-206ENST00000457035 A0A0J9YWU9 116 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 A0A1W2PRE2 83 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 RBAKDNA6NC62 111 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 MAP1LC3B2A6NCE7 125 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 C3orf84H3BNL1 204 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 IGKV2D-40P01614 121 aaPredicted RBP7.26□□□□□ -1.25
ATG4A-206ENST00000457035 CDKN1BP46527 198 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 CSN1S1P47710 185 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 SUMO1P63165 101 aaKnown RBP7.26□□□□□ -1.25
ATG4A-206ENST00000457035 DPPA3Q6W0C5 159 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 Q8NAQ8 132 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 MAP1LC3BQ9GZQ8 125 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 PPP1R14DQ9NXH3 145 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 ZNF492Q9P255 531 aa7.26□□□□□ -1.25
ATG4A-206ENST00000457035 GGTLC3B5MD39 225 aa7.25□□□□□ -1.25
ATG4A-206ENST00000457035 SLC25A5P05141 298 aaKnown RBP7.25□□□□□ -1.25
ATG4A-206ENST00000457035 RBMY1A1P0DJD3 496 aaKnown RBP7.25□□□□□ -1.25
ATG4A-206ENST00000457035 RBMY1CP0DJD4 496 aa7.25□□□□□ -1.25
ATG4A-206ENST00000457035 MIFP14174 115 aa7.25□□□□□ -1.25
ATG4A-206ENST00000457035 TSPOP30536 169 aa7.25□□□□□ -1.25
ATG4A-206ENST00000457035 SULT1A2P50226 295 aa7.25□□□□□ -1.25
ATG4A-206ENST00000457035 RAB5CP51148 216 aa7.25□□□□□ -1.25
ATG4A-206ENST00000457035 RBMY1FQ15415 496 aaKnown RBP7.25□□□□□ -1.25
ATG4A-206ENST00000457035 FAM74A1Q5RGS3 127 aa7.25□□□□□ -1.25
ATG4A-206ENST00000457035 EIF5AL1Q6IS14 154 aaKnown RBP7.25□□□□□ -1.25
ATG4A-206ENST00000457035 CMTM2Q8TAZ6 248 aa7.25□□□□□ -1.25
ATG4A-206ENST00000457035 FAM213BQ8TBF2 198 aa7.25□□□□□ -1.25
ATG4A-206ENST00000457035 SFT2D1Q8WV19 159 aa7.25□□□□□ -1.25
ATG4A-206ENST00000457035 IGHV3OR16-12A0A075B7B8 117 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 IGHV4-28A0A0C4DH34 117 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 TMEM238LA0A1B0GVL6 79 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 SMIM9A6NGZ8 99 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 FAM74A7A6NL05 159 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 KLLNB2CW77 178 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 DEFB4AO15263 64 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 INSP01308 110 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 PRM2P04554 102 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 CRISP2P16562 243 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 ZNF138P52744 262 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 GNG5P63218 68 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 CASC10Q5T4H9 136 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 TMEM78Q5T7P6 136 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 IQCF2Q8IXL9 164 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 ZFAND2AQ8N6M9 145 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 C5orf17Q8NAS9 161 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 MUC7Q8TAX7 377 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 C11orf68Q9H3H3 251 aaKnown RBP7.24□□□□□ -1.25
ATG4A-206ENST00000457035 EPDR1Q9UM22 224 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 GOLT1BQ9Y3E0 138 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 YTHDF2Q9Y5A9 579 aaKnown RBP7.24□□□□□ -1.25
ATG4A-206ENST00000457035 TENM2Q9NT68 2774 aa7.24□□□□□ -1.25
ATG4A-206ENST00000457035 TRAV1-1A0A0B4J248 108 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 TRBV7-9A0A0J9YWB2 115 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 ZNF324O75467 553 aaPredicted RBP7.23□□□□□ -1.25
ATG4A-206ENST00000457035 TCRAP04437 139 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 NMBP08949 121 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 LEPP41159 167 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 UBE2G2P60604 165 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 CCL20P78556 96 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 GFI1BQ5VTD9 330 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 GOLT1AQ6ZVE7 132 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 CCDC28AQ8IWP9 274 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 C20orf144Q9BQM9 153 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 NKX6-2Q9C056 277 aaPredicted RBP7.23□□□□□ -1.25
ATG4A-206ENST00000457035 LENEPQ9Y5L5 61 aa7.23□□□□□ -1.25
ATG4A-206ENST00000457035 TRAV8-1A0A0A6YYK1 113 aa7.22□□□□□ -1.25
ATG4A-206ENST00000457035 ZNF705GA8MUZ8 300 aaPredicted RBP7.22□□□□□ -1.25
ATG4A-206ENST00000457035 J3KRW8 73 aa7.22□□□□□ -1.25
ATG4A-206ENST00000457035 IGLV2-11P01706 119 aa7.22□□□□□ -1.25
ATG4A-206ENST00000457035 AZU1P20160 251 aa7.22□□□□□ -1.25
ATG4A-206ENST00000457035 CDPF1Q6NVV7 123 aa7.22□□□□□ -1.25
ATG4A-206ENST00000457035 TMEM256Q8N2U0 113 aa7.22□□□□□ -1.25
ATG4A-206ENST00000457035 IL17DQ8TAD2 202 aa7.22□□□□□ -1.25
ATG4A-206ENST00000457035 Q8TAT8 98 aa7.22□□□□□ -1.25
ATG4A-206ENST00000457035 TVP23CQ96ET8 276 aa7.22□□□□□ -1.25
ATG4A-206ENST00000457035 LINC01587Q99440 93 aa7.22□□□□□ -1.25
ATG4A-206ENST00000457035 TMEM208Q9BTX3 173 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms