RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 PGPEP1Q9NXJ5 209 aa11.45□□□□□ -0.58
TVP23A-202ENST00000456096 SRRM2Q9UQ35 2752 aaKnown RBP11.45□□□□□ -0.58
TVP23A-202ENST00000456096 FAM24AA6NFZ4 105 aa11.44□□□□□ -0.58
TVP23A-202ENST00000456096 FAM25EA8MYX2 175 aa11.44□□□□□ -0.58
TVP23A-202ENST00000456096 NDUFB4O95168 129 aa11.44□□□□□ -0.58
TVP23A-202ENST00000456096 ANXA2RQ3ZCQ2 193 aa11.44□□□□□ -0.58
TVP23A-202ENST00000456096 LINC00477Q96M19 166 aa11.44□□□□□ -0.58
TVP23A-202ENST00000456096 C11orf1Q9H5F2 150 aa11.44□□□□□ -0.58
TVP23A-202ENST00000456096 TNFRSF18Q9Y5U5 241 aa11.44□□□□□ -0.58
TVP23A-202ENST00000456096 PAX4O43316 350 aa11.43□□□□□ -0.58
TVP23A-202ENST00000456096 IGHV3-53P01767 116 aa11.43□□□□□ -0.58
TVP23A-202ENST00000456096 RPL29P47914 159 aaKnown RBP11.43□□□□□ -0.58
TVP23A-202ENST00000456096 TCL1AP56279 114 aa11.43□□□□□ -0.58
TVP23A-202ENST00000456096 VWC2Q2TAL6 325 aa11.43□□□□□ -0.58
TVP23A-202ENST00000456096 EXOC3-AS1Q8N2X6 119 aa11.43□□□□□ -0.58
TVP23A-202ENST00000456096 C12orf45Q8N5I9 185 aaPredicted RBP11.43□□□□□ -0.58
TVP23A-202ENST00000456096 RBM38Q9H0Z9 239 aaKnown RBP11.43□□□□□ -0.58
TVP23A-202ENST00000456096 C20orf85Q9H1P6 137 aa11.43□□□□□ -0.58
TVP23A-202ENST00000456096 TMEM14CQ9P0S9 112 aa11.43□□□□□ -0.58
TVP23A-202ENST00000456096 TP53TG3Q9ULZ0 132 aa11.43□□□□□ -0.58
TVP23A-202ENST00000456096 TIMM9Q9Y5J7 89 aa11.43□□□□□ -0.58
TVP23A-202ENST00000456096 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
TVP23A-202ENST00000456096 UBE2L5PA0A1B0GUS4 154 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 EREGO14944 169 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 MPDU1O75352 247 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 GPX1P07203 203 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 PYYP10082 97 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 HIST1H1EP10412 219 aaKnown RBP11.42□□□□□ -0.58
TVP23A-202ENST00000456096 XGP55808 180 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 ERVFC1-1P60608 527 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 BAXQ07812 192 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 CNPY1Q3B7I2 92 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 BLNKQ8WV28 456 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 ST6GAL2Q96JF0 529 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 PRELID1Q9Y255 219 aa11.42□□□□□ -0.58
TVP23A-202ENST00000456096 MYCBP2O75592 4640 aa11.41□□□□□ -0.58
TVP23A-202ENST00000456096 IL7P13232 177 aa11.41□□□□□ -0.58
TVP23A-202ENST00000456096 CRISP2P16562 243 aa11.41□□□□□ -0.58
TVP23A-202ENST00000456096 PRR9Q5T870 116 aa11.41□□□□□ -0.58
TVP23A-202ENST00000456096 Q6ZQT7 251 aa11.41□□□□□ -0.58
TVP23A-202ENST00000456096 C9orf47Q6ZRZ4 202 aa11.41□□□□□ -0.58
TVP23A-202ENST00000456096 LYPD1Q8N2G4 141 aa11.41□□□□□ -0.58
TVP23A-202ENST00000456096 MRPL16Q9NX20 251 aaKnown RBP11.41□□□□□ -0.58
TVP23A-202ENST00000456096 PTTG2Q9NZH5 202 aa11.41□□□□□ -0.58
TVP23A-202ENST00000456096 PRO0255Q9UI72 69 aa11.41□□□□□ -0.58
TVP23A-202ENST00000456096 C5orf51A6NDU8 294 aa11.4□□□□□ -0.58
TVP23A-202ENST00000456096 RGS13O14921 159 aa11.4□□□□□ -0.58
TVP23A-202ENST00000456096 S100A11P31949 105 aa11.4□□□□□ -0.58
TVP23A-202ENST00000456096 SULT1A1P50225 295 aa11.4□□□□□ -0.58
TVP23A-202ENST00000456096 PDE6HQ13956 83 aa11.4□□□□□ -0.58
TVP23A-202ENST00000456096 IBA57Q5T440 356 aaKnown RBP11.4□□□□□ -0.58
TVP23A-202ENST00000456096 LYPD5Q6UWN5 251 aa11.4□□□□□ -0.58
TVP23A-202ENST00000456096 ZFAND2AQ8N6M9 145 aa11.4□□□□□ -0.58
TVP23A-202ENST00000456096 CHAC2Q8WUX2 184 aa11.4□□□□□ -0.58
TVP23A-202ENST00000456096 C8orf49Q96NF6 230 aa11.4□□□□□ -0.58
TVP23A-202ENST00000456096 VGLL1Q99990 258 aa11.4□□□□□ -0.58
TVP23A-202ENST00000456096 HHLA3Q9XRX5 114 aa11.4□□□□□ -0.58
TVP23A-202ENST00000456096 IGHV1OR15-1A0A075B7D0 117 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 IGKV2-40A0A087WW87 121 aaPredicted RBP11.39□□□□□ -0.59
TVP23A-202ENST00000456096 IGSF23A1L1A6 192 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 PLA2G10O15496 165 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 PRAF2O60831 178 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 IGKV2D-40P01614 121 aaPredicted RBP11.39□□□□□ -0.59
TVP23A-202ENST00000456096 NMBP08949 121 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 INAFM2P0DMQ5 153 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 PVALBP20472 110 aaPredicted RBP11.39□□□□□ -0.59
TVP23A-202ENST00000456096 FGF7P21781 194 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 CRYBA4P53673 196 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 FHL2Q14192 279 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 ICAM4Q14773 271 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 GCSAMLQ5JQS6 135 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 TMEM78Q5T7P6 136 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 CDPF1Q6NVV7 123 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 C2orf50Q96LR7 162 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 SEC22CQ9BRL7 303 aa11.39□□□□□ -0.59
TVP23A-202ENST00000456096 LYRM2Q9NU23 88 aaPredicted RBP11.39□□□□□ -0.59
TVP23A-202ENST00000456096 TRAV6A0A075B6T7 132 aa11.38□□□□□ -0.59
TVP23A-202ENST00000456096 DNAH10OSP0CZ25 163 aa11.38□□□□□ -0.59
TVP23A-202ENST00000456096 KRTAP10-1P60331 282 aa11.38□□□□□ -0.59
TVP23A-202ENST00000456096 S100A10P60903 97 aa11.38□□□□□ -0.59
TVP23A-202ENST00000456096 SLAQ13239 276 aa11.38□□□□□ -0.59
TVP23A-202ENST00000456096 MRPL23Q16540 153 aaKnown RBP11.38□□□□□ -0.59
TVP23A-202ENST00000456096 FAM122CQ6P4D5 195 aa11.38□□□□□ -0.59
TVP23A-202ENST00000456096 NFE4Q86UQ8 179 aa11.38□□□□□ -0.59
TVP23A-202ENST00000456096 TMEM252Q8N6L7 170 aa11.38□□□□□ -0.59
TVP23A-202ENST00000456096 AAMDCQ9H7C9 122 aa11.38□□□□□ -0.59
TVP23A-202ENST00000456096 A0A087WTM6 91 aa11.37□□□□□ -0.59
TVP23A-202ENST00000456096 HBG1P69891 147 aa11.37□□□□□ -0.59
TVP23A-202ENST00000456096 HBG2P69892 147 aa11.37□□□□□ -0.59
TVP23A-202ENST00000456096 STX12Q86Y82 276 aa11.37□□□□□ -0.59
TVP23A-202ENST00000456096 ARPC5LQ9BPX5 153 aa11.37□□□□□ -0.59
TVP23A-202ENST00000456096 SLC25A2Q9BXI2 301 aa11.37□□□□□ -0.59
TVP23A-202ENST00000456096 ZNF492Q9P255 531 aa11.37□□□□□ -0.59
TVP23A-202ENST00000456096 TRAV9-2A0A087WT02 112 aa11.36□□□□□ -0.59
TVP23A-202ENST00000456096 TCRBP04435 133 aa11.36□□□□□ -0.59
TVP23A-202ENST00000456096 RAB32Q13637 225 aa11.36□□□□□ -0.59
TVP23A-202ENST00000456096 ATP6V1FQ16864 119 aa11.36□□□□□ -0.59
TVP23A-202ENST00000456096 Q5VSD8 79 aa11.36□□□□□ -0.59
TVP23A-202ENST00000456096 MIR17HGQ75NE6 70 aa11.36□□□□□ -0.59
TVP23A-202ENST00000456096 NEGR1Q7Z3B1 354 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms