RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 SNURFLB1AK76 121 aa14.95□□□□□ -0.02
HMGB3-205ENST00000455596 RNF212Q495C1 297 aa14.95□□□□□ -0.02
HMGB3-205ENST00000455596 FAM19A4Q96LR4 140 aa14.95□□□□□ -0.02
HMGB3-205ENST00000455596 IGKV2-40A0A087WW87 121 aaPredicted RBP14.94□□□□□ -0.02
HMGB3-205ENST00000455596 KLLNB2CW77 178 aa14.94□□□□□ -0.02
HMGB3-205ENST00000455596 IGKV2D-40P01614 121 aaPredicted RBP14.94□□□□□ -0.02
HMGB3-205ENST00000455596 TAS2R45P59539 299 aa14.94□□□□□ -0.02
HMGB3-205ENST00000455596 KHDC3LQ587J8 217 aa14.94□□□□□ -0.02
HMGB3-205ENST00000455596 TMEM78Q5T7P6 136 aa14.94□□□□□ -0.02
HMGB3-205ENST00000455596 PHYHIPLQ96FC7 376 aa14.94□□□□□ -0.02
HMGB3-205ENST00000455596 WFDC1Q9HC57 220 aa14.94□□□□□ -0.02
HMGB3-205ENST00000455596 UBE2L3P68036 154 aaKnown RBP14.93□□□□□ -0.02
HMGB3-205ENST00000455596 ZNF503Q96F45 646 aa14.93□□□□□ -0.02
HMGB3-205ENST00000455596 MED28Q9H204 178 aa14.93□□□□□ -0.02
HMGB3-205ENST00000455596 GPX1P07203 203 aa14.92□□□□□ -0.02
HMGB3-205ENST00000455596 CRISP2P16562 243 aa14.92□□□□□ -0.02
HMGB3-205ENST00000455596 CSN1S1P47710 185 aa14.92□□□□□ -0.02
HMGB3-205ENST00000455596 CD300CQ08708 224 aa14.92□□□□□ -0.02
HMGB3-205ENST00000455596 BTN1A1Q13410 526 aa14.92□□□□□ -0.02
HMGB3-205ENST00000455596 LYPD1Q8N2G4 141 aa14.92□□□□□ -0.02
HMGB3-205ENST00000455596 LINC00612Q8N6U2 182 aa14.92□□□□□ -0.02
HMGB3-205ENST00000455596 VGLL1Q99990 258 aa14.92□□□□□ -0.02
HMGB3-205ENST00000455596 VPS13DQ5THJ4 4388 aa14.91□□□□□ -0.02
HMGB3-205ENST00000455596 M0R2N4 97 aa14.91□□□□□ -0.02
HMGB3-205ENST00000455596 NMBP08949 121 aa14.91□□□□□ -0.02
HMGB3-205ENST00000455596 RNASE4P34096 147 aaKnown RBP14.91□□□□□ -0.02
HMGB3-205ENST00000455596 RANP62826 216 aaKnown RBP14.91□□□□□ -0.02
HMGB3-205ENST00000455596 ACOT6Q3I5F7 207 aaPredicted RBP14.91□□□□□ -0.02
HMGB3-205ENST00000455596 Q9H3A6 140 aa14.91□□□□□ -0.02
HMGB3-205ENST00000455596 ZNF492Q9P255 531 aa14.91□□□□□ -0.02
HMGB3-205ENST00000455596 BIRC6Q9NR09 4857 aa14.91□□□□□ -0.02
HMGB3-205ENST00000455596 GAGE12BA1L429 117 aa14.9□□□□□ -0.02
HMGB3-205ENST00000455596 ZNF324O75467 553 aaPredicted RBP14.9□□□□□ -0.02
HMGB3-205ENST00000455596 GAGE7O76087 117 aa14.9□□□□□ -0.02
HMGB3-205ENST00000455596 NUDT3O95989 172 aa14.9□□□□□ -0.02
HMGB3-205ENST00000455596 GAGE12FP0CL80 117 aa14.9□□□□□ -0.02
HMGB3-205ENST00000455596 GAGE12GP0CL81 117 aa14.9□□□□□ -0.02
HMGB3-205ENST00000455596 GAGE12IP0CL82 117 aa14.9□□□□□ -0.02
HMGB3-205ENST00000455596 M6PRP20645 277 aa14.9□□□□□ -0.02
HMGB3-205ENST00000455596 LGALS9BQ3B8N2 356 aa14.9□□□□□ -0.02
HMGB3-205ENST00000455596 ZNF680Q8NEM1 530 aa14.9□□□□□ -0.02
HMGB3-205ENST00000455596 LINC00467Q9BRT7 94 aa14.9□□□□□ -0.02
HMGB3-205ENST00000455596 A0A1W2PPV4 95 aa14.89□□□□□ -0.03
HMGB3-205ENST00000455596 RBAKDNA6NC62 111 aa14.89□□□□□ -0.03
HMGB3-205ENST00000455596 DAZ2Q13117 558 aaKnown RBP14.89□□□□□ -0.03
HMGB3-205ENST00000455596 LINC00336Q6ZUF6 198 aa14.89□□□□□ -0.03
HMGB3-205ENST00000455596 EIF4E3Q8N5X7 224 aaKnown RBP14.89□□□□□ -0.03
HMGB3-205ENST00000455596 ZFAND2AQ8N6M9 145 aa14.89□□□□□ -0.03
HMGB3-205ENST00000455596 ATG101Q9BSB4 218 aa14.89□□□□□ -0.03
HMGB3-205ENST00000455596 IGLV2-18A0A075B6J9 118 aa14.88□□□□□ -0.03
HMGB3-205ENST00000455596 ZNF138P52744 262 aa14.88□□□□□ -0.03
HMGB3-205ENST00000455596 FAM3BP58499 235 aaPredicted RBP14.88□□□□□ -0.03
HMGB3-205ENST00000455596 ZNF266Q14584 549 aa14.88□□□□□ -0.03
HMGB3-205ENST00000455596 ANXA2RQ3ZCQ2 193 aa14.88□□□□□ -0.03
HMGB3-205ENST00000455596 TRBV7-9A0A0J9YWB2 115 aa14.87□□□□□ -0.03
HMGB3-205ENST00000455596 OR5I1Q13606 314 aa14.87□□□□□ -0.03
HMGB3-205ENST00000455596 PRR9Q5T870 116 aa14.87□□□□□ -0.03
HMGB3-205ENST00000455596 PQLC2Q6ZP29 291 aa14.87□□□□□ -0.03
HMGB3-205ENST00000455596 C11orf72Q8NBR9 251 aa14.87□□□□□ -0.03
HMGB3-205ENST00000455596 GSN-AS1Q9NRJ2 163 aa14.87□□□□□ -0.03
HMGB3-205ENST00000455596 DNAH6Q9C0G6 4158 aa14.87□□□□□ -0.03
HMGB3-205ENST00000455596 FRAS1Q86XX4 4008 aa14.87□□□□□ -0.03
HMGB3-205ENST00000455596 RGS13O14921 159 aa14.86□□□□□ -0.03
HMGB3-205ENST00000455596 EIF3GO75821 320 aaKnown RBP eCLIP14.86□□□□□ -0.03
HMGB3-205ENST00000455596 RAB2AP61019 212 aa14.86□□□□□ -0.03
HMGB3-205ENST00000455596 Q8TAT8 98 aa14.86□□□□□ -0.03
HMGB3-205ENST00000455596 RXFP4Q8TDU9 374 aa14.86□□□□□ -0.03
HMGB3-205ENST00000455596 AQP10Q96PS8 301 aa14.86□□□□□ -0.03
HMGB3-205ENST00000455596 DIRC3C9JPN6 131 aa14.85□□□□□ -0.03
HMGB3-205ENST00000455596 FAM74A1Q5RGS3 127 aa14.85□□□□□ -0.03
HMGB3-205ENST00000455596 Q6ZR54 194 aa14.85□□□□□ -0.03
HMGB3-205ENST00000455596 Q6ZTI0 123 aa14.85□□□□□ -0.03
HMGB3-205ENST00000455596 OR10G4Q8NGN3 311 aa14.85□□□□□ -0.03
HMGB3-205ENST00000455596 OR10G9Q8NGN4 311 aa14.85□□□□□ -0.03
HMGB3-205ENST00000455596 OR10G7Q8NGN6 311 aa14.85□□□□□ -0.03
HMGB3-205ENST00000455596 ASB13Q8WXK3 278 aa14.85□□□□□ -0.03
HMGB3-205ENST00000455596 OTORQ9NRC9 128 aa14.85□□□□□ -0.03
HMGB3-205ENST00000455596 GIPP09681 153 aaPredicted RBP14.84□□□□□ -0.03
HMGB3-205ENST00000455596 IBA57Q5T440 356 aaKnown RBP14.84□□□□□ -0.03
HMGB3-205ENST00000455596 HSD17B11Q8NBQ5 300 aa14.84□□□□□ -0.03
HMGB3-205ENST00000455596 GNPNAT1Q96EK6 184 aaPredicted RBP14.84□□□□□ -0.03
HMGB3-205ENST00000455596 HYLS1Q96M11 299 aa14.84□□□□□ -0.03
HMGB3-205ENST00000455596 IGHV1OR15-1A0A075B7D0 117 aa14.83□□□□□ -0.04
HMGB3-205ENST00000455596 TRAV26-1A0A087WT03 109 aa14.83□□□□□ -0.04
HMGB3-205ENST00000455596 PGPA6NDG6 321 aa14.83□□□□□ -0.04
HMGB3-205ENST00000455596 HOXA5P20719 270 aa14.83□□□□□ -0.04
HMGB3-205ENST00000455596 CCL18P55774 89 aa14.83□□□□□ -0.04
HMGB3-205ENST00000455596 TCL1AP56279 114 aa14.83□□□□□ -0.04
HMGB3-205ENST00000455596 CMTM2Q8TAZ6 248 aa14.83□□□□□ -0.04
HMGB3-205ENST00000455596 PSMG3Q9BT73 122 aaPredicted RBP14.83□□□□□ -0.04
HMGB3-205ENST00000455596 LENEPQ9Y5L5 61 aa14.83□□□□□ -0.04
HMGB3-205ENST00000455596 TRGV2A0A075B6R0 118 aa14.82□□□□□ -0.04
HMGB3-205ENST00000455596 RTL8CO15255 209 aa14.82□□□□□ -0.04
HMGB3-205ENST00000455596 CDC34P49427 236 aaPredicted RBP14.82□□□□□ -0.04
HMGB3-205ENST00000455596 Q5BKY6 102 aa14.82□□□□□ -0.04
HMGB3-205ENST00000455596 Q6ZQT7 251 aa14.82□□□□□ -0.04
HMGB3-205ENST00000455596 OR2G3Q8NGZ4 309 aa14.82□□□□□ -0.04
HMGB3-205ENST00000455596 ARPC5LQ9BPX5 153 aa14.82□□□□□ -0.04
HMGB3-205ENST00000455596 TMPRSS5Q9H3S3 457 aa14.82□□□□□ -0.04
HMGB3-205ENST00000455596 TP53TG3Q9ULZ0 132 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms