RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 IGHV3-48P01763 117 aa7.63□□□□□ -1.19
LINC01940-201ENST00000455228 LINC00336Q6ZUF6 198 aa7.63□□□□□ -1.19
LINC01940-201ENST00000455228 DMDP11532 3685 aa7.63□□□□□ -1.19
LINC01940-201ENST00000455228 IGHV1-18A0A0C4DH31 117 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 PLAUP00749 431 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 FOXA3P55318 350 aaPredicted RBP7.62□□□□□ -1.19
LINC01940-201ENST00000455228 TMEM258P61165 79 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 DEFB121Q5J5C9 76 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 IGFBPL1Q8WX77 278 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 SLC25A2Q9BXI2 301 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 TP53TG1Q9Y2A0 90 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 DSPP15924 2871 aaKnown RBP7.62□□□□□ -1.19
LINC01940-201ENST00000455228 DLL1O00548 723 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 TM4SF5O14894 197 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 SAA1P0DJI8 122 aaPredicted RBP7.62□□□□□ -1.19
LINC01940-201ENST00000455228 RNASE2P10153 161 aaKnown RBP7.62□□□□□ -1.19
LINC01940-201ENST00000455228 ITLN1Q8WWA0 313 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 C2orf48Q96LS8 159 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 CHAC1Q9BUX1 264 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 A0A1W2PRX2 142 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 SRRM4A7MD48 611 aaKnown RBP7.62□□□□□ -1.19
LINC01940-201ENST00000455228 OVOL1O14753 267 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 EMP1P54849 157 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 GNG5P63218 68 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 SDIM1Q6ZPB5 146 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 PDPNQ86YL7 162 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 C9orf106Q8NAJ2 232 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 OR4C13Q8NGP0 309 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 EDA2RQ9HAV5 297 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 ARFGEF3Q5TH69 2177 aa7.62□□□□□ -1.19
LINC01940-201ENST00000455228 LINC01546A6NGU7 62 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 M0R1B8 84 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 C4orf26Q17RF5 130 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 Q6ZQT7 251 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 PLEKHB2Q96CS7 222 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 A0A1W2PNU3 283 aaPredicted RBP7.61□□□□□ -1.19
LINC01940-201ENST00000455228 ZNF561-AS1K7EIQ3 104 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 HBBP68871 147 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 ZNF329Q86UD4 541 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 FAM167A-AS1Q96KT0 104 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 ZNRD1Q9P1U0 126 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 TRBV7-3A0A075B6L6 115 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 SH2D7A6NKC9 451 aaPredicted RBP7.61□□□□□ -1.19
LINC01940-201ENST00000455228 K7ERJ3 54 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 HIST1H4AP62805 103 aaKnown RBP7.61□□□□□ -1.19
LINC01940-201ENST00000455228 DUX4L9Q6RFH8 374 aaPredicted RBP7.61□□□□□ -1.19
LINC01940-201ENST00000455228 CCL13Q99616 98 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 ARRDC1-AS1Q9H2J1 176 aa7.61□□□□□ -1.19
LINC01940-201ENST00000455228 PLCE1Q9P212 2302 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 A0A096LNJ9 63 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 OOSP1A8MZH6 123 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 PSMB8P28062 276 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 CCL11P51671 97 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 SUB1P53999 127 aaKnown RBP eCLIP7.6□□□□□ -1.19
LINC01940-201ENST00000455228 CIARTQ8N365 385 aaPredicted RBP7.6□□□□□ -1.19
LINC01940-201ENST00000455228 LINC00477Q96M19 166 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 SIRPDQ9H106 197 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 C7orf69Q9H7B7 122 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 ABCA1O95477 2261 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 PGPA6NDG6 321 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 CGB3P0DN86 165 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 CGB7P0DN87 165 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 ZNF137PP52743 207 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 HES3Q5TGS1 186 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 LINC00305Q7Z4B0 112 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 ZNF714Q96N38 554 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 JPT2Q9H910 190 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 RNF7Q9UBF6 113 aa7.6□□□□□ -1.19
LINC01940-201ENST00000455228 C19orf71A6NCJ1 209 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 A8MWL6 223 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 OVOL3O00110 214 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 CHEK1O14757 476 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 IGLV1-44P01699 117 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 P01737 135 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 FAM19A1Q7Z5A9 133 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 PGLYRP4Q96LB8 373 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 ROS1P08922 2347 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 K7EM74 188 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 CD24P25063 80 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 SSX8Q7RTT4 187 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 FAM216BQ8N7L0 139 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 C9orf85Q96MD7 179 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 DSCAMO60469 2012 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 CSN1S1P47710 185 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 MSMPQ1L6U9 139 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 CT83Q5H943 113 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 C1orf43Q9BWL3 253 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 RPP21Q9H633 154 aaKnown RBP7.59□□□□□ -1.19
LINC01940-201ENST00000455228 EPDR1Q9UM22 224 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 NAV3Q8IVL0 2385 aa7.59□□□□□ -1.19
LINC01940-201ENST00000455228 SRSF2Q01130 221 aaKnown RBP7.58□□□□□ -1.2
LINC01940-201ENST00000455228 MRPL20Q9BYC9 149 aaKnown RBP7.58□□□□□ -1.2
LINC01940-201ENST00000455228 RPUSD1Q9UJJ7 312 aaKnown RBP7.58□□□□□ -1.2
LINC01940-201ENST00000455228 HHLA3Q9XRX5 114 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 MUC6Q6W4X9 2439 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 A8MZ25 164 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 P0DMU3 169 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 FAM231AP0DMU4 169 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 FAM231CP0DMU5 169 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 SLC25A48Q6ZT89 311 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms