RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 AGPAT4-IT1Q9H0P7 198 aa8.06□□□□□ -1.12
HDAC9-217ENST00000455069 CYTL1Q9NRR1 136 aa8.06□□□□□ -1.12
HDAC9-217ENST00000455069 PGPEP1Q9NXJ5 209 aa8.06□□□□□ -1.12
HDAC9-217ENST00000455069 KLK5Q9Y337 293 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-217ENST00000455069 A0A1W2PPV4 95 aa8.05□□□□□ -1.12
HDAC9-217ENST00000455069 C11orf94C9JXX5 98 aa8.05□□□□□ -1.12
HDAC9-217ENST00000455069 STAG3L2P0CL84 134 aa8.05□□□□□ -1.12
HDAC9-217ENST00000455069 STAG3L3P0CL85 134 aa8.05□□□□□ -1.12
HDAC9-217ENST00000455069 ARL14EPLP0DKL9 152 aa8.05□□□□□ -1.12
HDAC9-217ENST00000455069 TSPOP30536 169 aa8.05□□□□□ -1.12
HDAC9-217ENST00000455069 CDC34P49427 236 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-217ENST00000455069 PRR9Q5T870 116 aa8.05□□□□□ -1.12
HDAC9-217ENST00000455069 PQLC2Q6ZP29 291 aa8.05□□□□□ -1.12
HDAC9-217ENST00000455069 LINC00528Q8N1L1 170 aa8.05□□□□□ -1.12
HDAC9-217ENST00000455069 TMEM256Q8N2U0 113 aa8.05□□□□□ -1.12
HDAC9-217ENST00000455069 TRAV10A0A0B4J240 114 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 KLLNB2CW77 178 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 SPART-AS1P0CW21 52 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 CRISP2P16562 243 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 LEPP41159 167 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 TAS2R60P59551 318 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 SERF2P84101 59 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 ZNF726P1Q15940 193 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 LYPD1Q8N2G4 141 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 ZFAND2AQ8N6M9 145 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 Q8TAT8 98 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 RNASE8Q8TDE3 154 aaKnown RBP8.04□□□□□ -1.12
HDAC9-217ENST00000455069 C2CD4CQ8TF44 421 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 RAB24Q969Q5 203 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 LINC00477Q96M19 166 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 LINC01587Q99440 93 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 C20orf144Q9BQM9 153 aa8.04□□□□□ -1.12
HDAC9-217ENST00000455069 DEFB131BA0A096LNP1 70 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 BORCS7-ASMTA0A0B4J1R7 106 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 TRAV12-3A0A0B4J271 114 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 C7orf71A4D174 169 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 CD300CQ08708 224 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 BTN1A1Q13410 526 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 ZNF345Q14585 488 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 Q6ZQT7 251 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 KCNRGQ8N5I3 272 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 SUN5Q8TC36 379 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 GNPNAT1Q96EK6 184 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-217ENST00000455069 NIPSNAP3BQ9BS92 247 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 ZNF492Q9P255 531 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 APLNQ9ULZ1 77 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 KMT2AQ03164 3969 aa8.03□□□□□ -1.12
HDAC9-217ENST00000455069 IGHV4-4A0A075B6R2 117 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 TEX48A0A1B0GUV7 120 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 RBAKDNA6NC62 111 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 IGLL5B9A064 214 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 DIRC3C9JPN6 131 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 H7BYZ3 331 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 ZNF324O75467 553 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-217ENST00000455069 MBP02144 154 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 HTN1P15515 57 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 GCHFRP30047 84 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 TMEM263Q8WUH6 116 aaKnown RBP8.02□□□□□ -1.13
HDAC9-217ENST00000455069 ST6GAL2Q96JF0 529 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 HYLS1Q96M11 299 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 OTORQ9NRC9 128 aa8.02□□□□□ -1.13
HDAC9-217ENST00000455069 FRAS1Q86XX4 4008 aa8.01□□□□□ -1.13
HDAC9-217ENST00000455069 PGPA6NDG6 321 aa8.01□□□□□ -1.13
HDAC9-217ENST00000455069 HMSDA8MTL9 139 aa8.01□□□□□ -1.13
HDAC9-217ENST00000455069 TAAR5O14804 337 aa8.01□□□□□ -1.13
HDAC9-217ENST00000455069 LY6G6CO95867 125 aa8.01□□□□□ -1.13
HDAC9-217ENST00000455069 SLC25A5P05141 298 aaKnown RBP8.01□□□□□ -1.13
HDAC9-217ENST00000455069 GNG5P63218 68 aa8.01□□□□□ -1.13
HDAC9-217ENST00000455069 TMEM78Q5T7P6 136 aa8.01□□□□□ -1.13
HDAC9-217ENST00000455069 Q6ZNX1 250 aa8.01□□□□□ -1.13
HDAC9-217ENST00000455069 C16orf74Q96GX8 76 aa8.01□□□□□ -1.13
HDAC9-217ENST00000455069 ARPC5LQ9BPX5 153 aa8.01□□□□□ -1.13
HDAC9-217ENST00000455069 LYRM9A8MSI8 78 aa8□□□□□ -1.13
HDAC9-217ENST00000455069 GGTLC3B5MD39 225 aa8□□□□□ -1.13
HDAC9-217ENST00000455069 RNASE4P34096 147 aaKnown RBP8□□□□□ -1.13
HDAC9-217ENST00000455069 CSN1S1P47710 185 aa8□□□□□ -1.13
HDAC9-217ENST00000455069 ZNF138P52744 262 aa8□□□□□ -1.13
HDAC9-217ENST00000455069 DAD1P61803 113 aa8□□□□□ -1.13
HDAC9-217ENST00000455069 LCE2CQ5TA81 110 aa8□□□□□ -1.13
HDAC9-217ENST00000455069 PYGO2Q9BRQ0 406 aa8□□□□□ -1.13
HDAC9-217ENST00000455069 ACTR3CQ9C0K3 210 aaPredicted RBP8□□□□□ -1.13
HDAC9-217ENST00000455069 RPH3ALQ9UNE2 315 aa8□□□□□ -1.13
HDAC9-217ENST00000455069 TRAV8-1A0A0A6YYK1 113 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 TRBV7-9A0A0J9YWB2 115 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 CTXND1A0A1B0GTU2 59 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 CXorf1O96002 111 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 GPX1P07203 203 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 NMBP08949 121 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 DEFB130BP0DP73 79 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 DEFB130AP0DP74 79 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 LGALS9CQ6DKI2 356 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 ZNF493Q6ZR52 646 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 GOLT1AQ6ZVE7 132 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 LINC00612Q8N6U2 182 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 C11orf72Q8NBR9 251 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 RXFP4Q8TDU9 374 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 TVP23CQ96ET8 276 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 TMPRSS5Q9H3S3 457 aa7.99□□□□□ -1.13
HDAC9-217ENST00000455069 NOP10Q9NPE3 64 aaKnown RBP7.99□□□□□ -1.13
HDAC9-217ENST00000455069 TIMM8BQ9Y5J9 83 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms