RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CBLN1P23435 193 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 TMEM95Q3KNT9 176 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 LINC01559Q495D7 138 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 FAM19A4Q96LR4 140 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 CNFNQ9BYD5 112 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 ESM1Q9NQ30 184 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 RPH3ALQ9UNE2 315 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 TRAPPC1Q9Y5R8 145 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 CSMD1Q96PZ7 3565 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 IGHV4OR15-8A0A075B7B6 117 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 A0A087WW49 117 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 A0A1B0GXF2 115 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 A8MTW9 85 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 K7EQG2 157 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 TRGC2P03986 189 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 HOXA5P20719 270 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 TSPOP30536 169 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 LEPP41159 167 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 HBBP68871 147 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 TM4SF20Q53R12 229 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 ZNF738Q8NE65 137 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 OR9G4Q8NGQ1 327 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 LINC01006Q8NI28 216 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 DCANP1Q8TF63 244 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 FRZBQ92765 325 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 ZC2HC1AQ96GY0 325 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 FAM110AQ9BQ89 295 aa5.18□□□□□ -1.58
ECHDC1-210ENST00000454859 TEX15Q9BXT5 2789 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 IGHV3-35A0A0C4DH35 117 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 A0A1B0GUT8 65 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 TMEM189A5PLL7 270 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST1H2BKO60814 126 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST1H2BJP06899 126 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST1H2BOP23527 126 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST1H2BBP33778 126 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 CTRLP40313 264 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST1H2BDP58876 126 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST1H2BCP62807 126 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 Q0VG73 95 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST2H2BEQ16778 126 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 OR10J3Q5JRS4 329 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 IL17RELQ6ZVW7 336 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 NDUFA11Q86Y39 141 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 NUP35Q8NFH5 326 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 OR8A1Q8NGG7 326 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 OR2D3Q8NGH3 330 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST1H2BHQ93079 126 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 NEU1Q99519 415 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST1H2BNQ99877 126 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIST1H2BMQ99879 126 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 AGPAT4-IT1Q9H0P7 198 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 FLNAP21333 2647 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 HIGD1CA8MV81 97 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 H3BTX0 84 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 CRLF1O75462 422 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 AMBPP02760 352 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 FOXI2Q6ZQN5 318 aa5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 SPAG8Q99932 426 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 AURKAIP1Q9NWT8 199 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-210ENST00000454859 IGKV2-40A0A087WW87 121 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 TRAV8-1A0A0A6YYK1 113 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 TRAV21A0A0B4J279 112 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 OR4C46A6NHA9 309 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 SH2D1AO60880 128 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 IGKV2D-40P01614 121 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 TRGC1P0CF51 173 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 ESDP10768 282 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 SYNJ2BPP57105 145 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 PROK1P58294 105 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 CACNG7P62955 275 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 TCTEX1D4Q5JR98 221 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 PRR27Q6MZM9 219 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 ZNF493Q6ZR52 646 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 TMEM136Q6ZRR5 245 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 KLHL30-AS1Q8NEE0 82 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 OR11H1Q8NG94 326 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 VGLL1Q99990 258 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 MS4A6AQ9H2W1 248 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 RNF114Q9Y508 228 aa5.16□□□□□ -1.58
ECHDC1-210ENST00000454859 IGHV4-4A0A075B6R2 117 aa5.15□□□□□ -1.58
ECHDC1-210ENST00000454859 CCL24O00175 119 aa5.15□□□□□ -1.58
ECHDC1-210ENST00000454859 ZNF207O43670 478 aaKnown RBP5.15□□□□□ -1.58
ECHDC1-210ENST00000454859 EBLN2Q6P2I7 272 aa5.15□□□□□ -1.58
ECHDC1-210ENST00000454859 KCNS1Q96KK3 526 aa5.15□□□□□ -1.58
ECHDC1-210ENST00000454859 C20orf144Q9BQM9 153 aa5.15□□□□□ -1.58
ECHDC1-210ENST00000454859 MRPL18Q9H0U6 180 aaKnown RBP5.15□□□□□ -1.58
ECHDC1-210ENST00000454859 SNURFLB1AK76 121 aa5.15□□□□□ -1.59
ECHDC1-210ENST00000454859 CSN3P07498 182 aa5.15□□□□□ -1.59
ECHDC1-210ENST00000454859 OR5AL1P0C617 328 aa5.15□□□□□ -1.59
ECHDC1-210ENST00000454859 IGLC6P0CF74 106 aa5.15□□□□□ -1.59
ECHDC1-210ENST00000454859 CRIP1P50238 77 aa5.15□□□□□ -1.59
ECHDC1-210ENST00000454859 RPL11P62913 178 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-210ENST00000454859 LCNL1Q6ZST4 164 aa5.15□□□□□ -1.59
ECHDC1-210ENST00000454859 NHLRC2Q8NBF2 726 aa5.15□□□□□ -1.59
ECHDC1-210ENST00000454859 SSBP4Q9BWG4 385 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-210ENST00000454859 LAMTOR2Q9Y2Q5 125 aa5.15□□□□□ -1.59
ECHDC1-210ENST00000454859 CSMD2Q7Z408 3487 aa5.15□□□□□ -1.59
ECHDC1-210ENST00000454859 KLLNB2CW77 178 aa5.14□□□□□ -1.59
ECHDC1-210ENST00000454859 APCSP02743 223 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms