RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 LY6G5BQ8NDX9 201 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 SMIM12Q96EX1 92 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 CSTL1Q9H114 145 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 H3BRN7 92 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 S100A4P26447 101 aaKnown RBP9.37□□□□□ -0.91
SMPD4-213ENST00000454468 Q0VG73 95 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 AMN1Q8IY45 258 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 MRPL27Q9P0M9 148 aaKnown RBP9.37□□□□□ -0.91
SMPD4-213ENST00000454468 CELSR1Q9NYQ6 3014 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 KIR2DL5BA0A0G2JN68 375 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 KIR2DL5BA0A0G2JPC4 375 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 INS-IGF2F8WCM5 200 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 OR10J3Q5JRS4 329 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 KIR2DL5AQ8N109 375 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 Q8N9W7 124 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 AP1S3Q96PC3 154 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 CST9LQ9H4G1 147 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 CTSGP08311 255 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 HTN1P15515 57 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 EVI2AP22794 236 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 UBE2E1P51965 193 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 SIGLEC15Q6ZMC9 328 aa9.37□□□□□ -0.91
SMPD4-213ENST00000454468 SH2D1AO60880 128 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 LTAP01374 205 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 TP73-AS1Q9UF72 201 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 IGLV11-55A0A075B6I3 123 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 hDV102S1A0JD36 115 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 IGHV4-38-2P0DP08 117 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 PAX1P15863 534 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 TMEM78Q5T7P6 136 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 MINOS1Q5TGZ0 78 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 C11orf71Q6IPW1 123 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 EEF1AKMT3Q96AZ1 226 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 MINOS1-NBL1R4GNA1 71 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 BSNQ9UPA5 3926 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 NACAE9PAV3 2078 aa9.36□□□□□ -0.91
SMPD4-213ENST00000454468 PRRC2AP48634 2157 aaKnown RBP9.36□□□□□ -0.91
SMPD4-213ENST00000454468 FAM181BA6NEQ2 426 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 PSG9Q00887 426 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 ORAOV1Q8WV07 137 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 AP5S1Q9NUS5 200 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 UQCR10Q9UDW1 63 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 IGSF10Q6WRI0 2623 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 OR4C46A6NHA9 309 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 TMEM95Q3KNT9 176 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 KLHDC1Q8N7A1 406 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 CENPVL3A0A0U1RRI6 287 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 PRAC2D3DTV9 90 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 D6R8Y8 96 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 TGFAP01135 160 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 FAM162BQ5T6X4 162 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 FAM231DQ6ZW35 169 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 OR4B1Q8NGF8 309 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 TMEM70Q9BUB7 260 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 MAP1LC3CQ9BXW4 147 aa9.35□□□□□ -0.91
SMPD4-213ENST00000454468 TRAV41A0A0B4J266 112 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 ARL3P36405 182 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 BLCAPP62952 87 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 IGHV4-30-2A0A087WSY4 118 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 FSTL3O95633 263 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 LMO4P61968 165 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 SPANXN1Q5VSR9 72 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 CFAP161Q6P656 301 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 DTX2Q86UW9 622 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 NPBQ8NG41 125 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 PRELID3AQ96N28 172 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 KLK15Q9H2R5 256 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 MSRB1Q9NZV6 116 aa9.34□□□□□ -0.91
SMPD4-213ENST00000454468 EBLN2Q6P2I7 272 aa9.33□□□□□ -0.92
SMPD4-213ENST00000454468 FER1L6-AS1Q8NA97 138 aa9.33□□□□□ -0.92
SMPD4-213ENST00000454468 COX11Q9Y6N1 276 aa9.33□□□□□ -0.92
SMPD4-213ENST00000454468 ODF3BA8MYP8 253 aa9.33□□□□□ -0.92
SMPD4-213ENST00000454468 NDUFA3O95167 84 aa9.33□□□□□ -0.92
SMPD4-213ENST00000454468 HIST1H1AQ02539 215 aaPredicted RBP9.33□□□□□ -0.92
SMPD4-213ENST00000454468 SAMD13Q5VXD3 122 aa9.33□□□□□ -0.92
SMPD4-213ENST00000454468 IL17RELQ6ZVW7 336 aa9.33□□□□□ -0.92
SMPD4-213ENST00000454468 SIRPDQ9H106 197 aa9.33□□□□□ -0.92
SMPD4-213ENST00000454468 ITPR1Q14643 2758 aa9.33□□□□□ -0.92
SMPD4-213ENST00000454468 M0R381 172 aa9.33□□□□□ -0.92
SMPD4-213ENST00000454468 IFI27P40305 119 aaPredicted RBP9.33□□□□□ -0.92
SMPD4-213ENST00000454468 MYCNOSP40205 109 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 TTC9CQ8N5M4 171 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 MBD6Q96DN6 1003 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 IGLC2P0DOY2 106 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 PAX8Q06710 450 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 SCGB2A2Q13296 93 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 C20orf144Q9BQM9 153 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 TRBV12-3P01733 135 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 PRSS1P07477 247 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 EGR2P11161 476 aaPredicted RBP9.32□□□□□ -0.92
SMPD4-213ENST00000454468 PLP1P60201 277 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 RPL24P83731 157 aaKnown RBP9.32□□□□□ -0.92
SMPD4-213ENST00000454468 MLST8Q9BVC4 326 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 TMEM191AQ9H0A3 160 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 TMEM14CQ9P0S9 112 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 KLF12Q9Y4X4 402 aa9.32□□□□□ -0.92
SMPD4-213ENST00000454468 SMAGPQ0VAQ4 97 aa9.31□□□□□ -0.92
SMPD4-213ENST00000454468 PRR25Q96S07 402 aa9.31□□□□□ -0.92
SMPD4-213ENST00000454468 ZANQ9Y493 2812 aa9.31□□□□□ -0.92
SMPD4-213ENST00000454468 ATP5L2Q7Z4Y8 100 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms