RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 C3orf56Q8N813 242 aa6.12□□□□□ -1.43
RIF1-206ENST00000453091 IGF2BP2-AS1Q96M15 143 aa6.12□□□□□ -1.43
RIF1-206ENST00000453091 ALPK2Q86TB3 2170 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 SS18L2Q9UHA2 77 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 SPTBP11277 2137 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 ANK1P16157 1881 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 DOCK3Q8IZD9 2030 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 K7ENP7 123 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 ZNF491Q8N8L2 437 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 PTPRZ1P23471 2315 aaPredicted RBP6.11□□□□□ -1.43
RIF1-206ENST00000453091 PRAC2D3DTV9 90 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 GTSF1Q8WW33 167 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 RLFQ13129 1914 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 PFN2P35080 140 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 KLHL30-AS1Q8NEE0 82 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 RPL39LQ96EH5 51 aaKnown RBP6.11□□□□□ -1.43
RIF1-206ENST00000453091 Q96MF0 132 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 NXPH4O95158 308 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 DEFB130BP0DP73 79 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 DEFB130AP0DP74 79 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 CRIP3Q6Q6R5 217 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 C1orf229Q6ZS94 237 aaPredicted RBP6.11□□□□□ -1.43
RIF1-206ENST00000453091 PLEKHB2Q96CS7 222 aa6.11□□□□□ -1.43
RIF1-206ENST00000453091 IGKV1OR2-108A0A075B7D4 117 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 C12orf74Q32Q52 190 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 LYPD1Q8N2G4 141 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 FAM110DQ8TAY7 271 aaPredicted RBP6.1□□□□□ -1.43
RIF1-206ENST00000453091 LGALS9BQ3B8N2 356 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 LGALS9CQ6DKI2 356 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 SDHAF1A6NFY7 115 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 VWC2LB2RUY7 222 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 MSMPQ1L6U9 139 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 PRIMA1Q86XR5 153 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 COPS9Q8WXC6 57 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 FNDC10F2Z333 226 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 HOXB4P17483 251 aaPredicted RBP6.1□□□□□ -1.43
RIF1-206ENST00000453091 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.1□□□□□ -1.43
RIF1-206ENST00000453091 ATP6V0BQ99437 205 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 GAGE12HA6NDE8 117 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 THAP8Q8NA92 274 aa6.1□□□□□ -1.43
RIF1-206ENST00000453091 CRPP02741 224 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 FGF6P10767 208 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 NTN5Q8WTR8 489 aaPredicted RBP6.09□□□□□ -1.43
RIF1-206ENST00000453091 AGPAT4-IT1Q9H0P7 198 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 C11orf1Q9H5F2 150 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 ZNF295-AS1Q8N0V1 137 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 TRBV7-1A0A0A6YYK4 115 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 TAX1BP3O14907 124 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 RNF5Q99942 180 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 TEX48A0A1B0GUV7 120 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 CLPSL2Q6UWE3 100 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 RNF114Q9Y508 228 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 DEFB136Q30KP8 78 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 DEFB121Q5J5C9 76 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 TSC2P49815 1807 aa6.09□□□□□ -1.43
RIF1-206ENST00000453091 IGLV1-44P01699 117 aa6.09□□□□□ -1.44
RIF1-206ENST00000453091 FXYD2P54710 66 aa6.09□□□□□ -1.44
RIF1-206ENST00000453091 S100A7L2Q5SY68 101 aa6.09□□□□□ -1.44
RIF1-206ENST00000453091 SCRT2Q9NQ03 307 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 PLXNA3P51805 1871 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 TRBV20-1A0A075B6N2 111 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 M0R1W7 72 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 GP9P14770 177 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 KLF5Q13887 457 aaPredicted RBP6.08□□□□□ -1.44
RIF1-206ENST00000453091 ITGB1BP1O14713 200 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 ZNF638Q14966 1978 aaKnown RBP6.08□□□□□ -1.44
RIF1-206ENST00000453091 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.08□□□□□ -1.44
RIF1-206ENST00000453091 IGKV2-29A2NJV5 120 aaPredicted RBP6.08□□□□□ -1.44
RIF1-206ENST00000453091 PRSS29PA6NIE9 313 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 KRTAP27-1Q3LI81 207 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 MINOS1Q5TGZ0 78 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 RASL10AQ92737 203 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 MINOS1-NBL1R4GNA1 71 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 BRWD1-AS2P59051 145 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 ZNRF2Q8NHG8 242 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 ZNF503Q96F45 646 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 LAMTOR3Q9UHA4 124 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 VWA8A3KMH1 1905 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 ABCA7Q8IZY2 2146 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 DEFB125Q8N687 156 aa6.08□□□□□ -1.44
RIF1-206ENST00000453091 GAGE6Q13070 117 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 CT83Q5H943 113 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 GDF5OSQ5U4N7 250 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 LINC00322Q6ZN03 302 aaPredicted RBP6.07□□□□□ -1.44
RIF1-206ENST00000453091 MED12Q93074 2177 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 TRPM7Q96QT4 1865 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 PMVKQ15126 192 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 LY6G5BQ8NDX9 201 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 SMIM2Q9BVW6 85 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 TINCRA0A1B0GVN0 87 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 B4DSR2 109 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 H3BMM0 161 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 WFDC2Q14508 124 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 OR11H6Q8NGC7 330 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 UBE2WQ96B02 151 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 DKK4Q9UBT3 224 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 IGLL5B9A064 214 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 GAGE7O76087 117 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 GAGE12FP0CL80 117 aa6.07□□□□□ -1.44
RIF1-206ENST00000453091 GAGE12GP0CL81 117 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms