RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 RPL29P47914 159 aaKnown RBP7.49□□□□□ -1.21
USP1-204ENST00000452143 CAV2P51636 162 aa7.49□□□□□ -1.21
USP1-204ENST00000452143 ZNF846Q147U1 533 aa7.49□□□□□ -1.21
USP1-204ENST00000452143 VWC2Q2TAL6 325 aa7.49□□□□□ -1.21
USP1-204ENST00000452143 ANXA2RQ3ZCQ2 193 aa7.49□□□□□ -1.21
USP1-204ENST00000452143 MIC13Q5XKP0 118 aa7.49□□□□□ -1.21
USP1-204ENST00000452143 C12orf45Q8N5I9 185 aaPredicted RBP7.49□□□□□ -1.21
USP1-204ENST00000452143 EIF4E3Q8N5X7 224 aaKnown RBP7.49□□□□□ -1.21
USP1-204ENST00000452143 VSIG2Q96IQ7 327 aa7.49□□□□□ -1.21
USP1-204ENST00000452143 RBM38Q9H0Z9 239 aaKnown RBP7.49□□□□□ -1.21
USP1-204ENST00000452143 UQCC1Q9NVA1 299 aa7.49□□□□□ -1.21
USP1-204ENST00000452143 PRELID1Q9Y255 219 aa7.49□□□□□ -1.21
USP1-204ENST00000452143 SIVA1O15304 175 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 NMBP08949 121 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 PVALBP20472 110 aaPredicted RBP7.48□□□□□ -1.21
USP1-204ENST00000452143 IBA57Q5T440 356 aaKnown RBP7.48□□□□□ -1.21
USP1-204ENST00000452143 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 Q6ZRN7 208 aaPredicted RBP7.48□□□□□ -1.21
USP1-204ENST00000452143 CHAC2Q8WUX2 184 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 FAM19A4Q96LR4 140 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 LINC00477Q96M19 166 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 KRTAP4-7Q9BYR0 210 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 C20orf85Q9H1P6 137 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 GSN-AS1Q9NRJ2 163 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 SLC39A9Q9NUM3 307 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 PTTG2Q9NZH5 202 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 TMEM14CQ9P0S9 112 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 FUT9Q9Y231 359 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 ICOSQ9Y6W8 199 aa7.48□□□□□ -1.21
USP1-204ENST00000452143 TRGV1A0A0A0MS02 117 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 TRAV5A0A0B4J249 113 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 UBE2L5PA0A1B0GUS4 154 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 M0R3E3 92 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 CCSO14618 274 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 EREGO14944 169 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 SPINK4O60575 86 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 ZNF324O75467 553 aaPredicted RBP7.47□□□□□ -1.21
USP1-204ENST00000452143 CST7O76096 145 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 IL7P13232 177 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 CRISP2P16562 243 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 SULT1A1P50225 295 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 BCAP31P51572 246 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 TCL1AP56279 114 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 ERVFC1-1P60608 527 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 HBG1P69891 147 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 HBG2P69892 147 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 STX12Q86Y82 276 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 ST6GAL2Q96JF0 529 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 C11orf1Q9H5F2 150 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 AAMDCQ9H7C9 122 aa7.47□□□□□ -1.21
USP1-204ENST00000452143 LYRM2Q9NU23 88 aaPredicted RBP7.47□□□□□ -1.21
USP1-204ENST00000452143 LSM5Q9Y4Y9 91 aaKnown RBP7.47□□□□□ -1.21
USP1-204ENST00000452143 EPM2AB3EWF7 344 aa7.46□□□□□ -1.22
USP1-204ENST00000452143 MPDU1O75352 247 aa7.46□□□□□ -1.22
USP1-204ENST00000452143 NDUFB4O95168 129 aa7.46□□□□□ -1.22
USP1-204ENST00000452143 HIST1H1EP10412 219 aaKnown RBP7.46□□□□□ -1.22
USP1-204ENST00000452143 S100A11P31949 105 aa7.46□□□□□ -1.22
USP1-204ENST00000452143 BAXQ07812 192 aa7.46□□□□□ -1.22
USP1-204ENST00000452143 SLAQ13239 276 aa7.46□□□□□ -1.22
USP1-204ENST00000452143 BTN1A1Q13410 526 aa7.46□□□□□ -1.22
USP1-204ENST00000452143 C9orf47Q6ZRZ4 202 aa7.46□□□□□ -1.22
USP1-204ENST00000452143 NFE4Q86UQ8 179 aa7.46□□□□□ -1.22
USP1-204ENST00000452143 SDHCQ99643 169 aaPredicted RBP7.46□□□□□ -1.22
USP1-204ENST00000452143 VGLL1Q99990 258 aa7.46□□□□□ -1.22
USP1-204ENST00000452143 FAM25EA8MYX2 175 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 K7EP13 123 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 PAX4O43316 350 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 NXPH4O95158 308 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 GPX1P07203 203 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 CD300CQ08708 224 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 ERCC8Q13216 396 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 TMEM78Q5T7P6 136 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 C2orf50Q96LR7 162 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 AGPAT4-IT1Q9H0P7 198 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 PRO0255Q9UI72 69 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 TIMM9Q9Y5J7 89 aa7.45□□□□□ -1.22
USP1-204ENST00000452143 FAT1Q14517 4588 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 TRBV7-9A0A0J9YWB2 115 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 C5orf51A6NDU8 294 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 FAM24AA6NFZ4 105 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 RGS13O14921 159 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 PYYP10082 97 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 FGF7P21781 194 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 RNASE4P34096 147 aaKnown RBP7.44□□□□□ -1.22
USP1-204ENST00000452143 ATP6V1FQ16864 119 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 TMEM252Q8N6L7 170 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 ZFAND2AQ8N6M9 145 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 ARPC5LQ9BPX5 153 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 NPCDR1Q9BY65 106 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 KLF12Q9Y4X4 402 aa7.44□□□□□ -1.22
USP1-204ENST00000452143 SRRM2Q9UQ35 2752 aaKnown RBP7.43□□□□□ -1.22
USP1-204ENST00000452143 IGHV1OR15-1A0A075B7D0 117 aa7.43□□□□□ -1.22
USP1-204ENST00000452143 IGSF23A1L1A6 192 aa7.43□□□□□ -1.22
USP1-204ENST00000452143 LYRM1O43325 122 aa7.43□□□□□ -1.22
USP1-204ENST00000452143 TCRBP04435 133 aa7.43□□□□□ -1.22
USP1-204ENST00000452143 CRYBA4P53673 196 aa7.43□□□□□ -1.22
USP1-204ENST00000452143 S100A10P60903 97 aa7.43□□□□□ -1.22
USP1-204ENST00000452143 ZNF415Q09FC8 603 aa7.43□□□□□ -1.22
USP1-204ENST00000452143 MRPL23Q16540 153 aaKnown RBP7.43□□□□□ -1.22
USP1-204ENST00000452143 LCE1DQ5T752 114 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms